RNA–Protein interactions for RNA: ENST00000367251.7

SYNE1-205, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 5,837 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-205ENST00000367251 GRM8O00222 908 aa10.39□□□□□ -0.75
SYNE1-205ENST00000367251 ZBTB7BO15156 539 aaPredicted RBP10.39□□□□□ -0.75
SYNE1-205ENST00000367251 HOXB7P09629 217 aa10.39□□□□□ -0.75
SYNE1-205ENST00000367251 KIF5BP33176 963 aa10.39□□□□□ -0.75
SYNE1-205ENST00000367251 MPNDQ8N594 471 aa10.39□□□□□ -0.75
SYNE1-205ENST00000367251 KRT23Q9C075 422 aa10.39□□□□□ -0.75
SYNE1-205ENST00000367251 LRRC27Q9C0I9 530 aa10.39□□□□□ -0.75
SYNE1-205ENST00000367251 TMEM266Q2M3C6 531 aa10.38□□□□□ -0.75
SYNE1-205ENST00000367251 CCDC102BQ68D86 513 aa10.38□□□□□ -0.75
SYNE1-205ENST00000367251 USP26Q9BXU7 913 aa10.38□□□□□ -0.75
SYNE1-205ENST00000367251 TRMT112Q9UI30 125 aaKnown RBP10.38□□□□□ -0.75
SYNE1-205ENST00000367251 GOLIM4O00461 696 aa10.38□□□□□ -0.75
SYNE1-205ENST00000367251 IL15P40933 162 aaPredicted RBP10.38□□□□□ -0.75
SYNE1-205ENST00000367251 AMPD3Q01432 767 aa10.38□□□□□ -0.75
SYNE1-205ENST00000367251 USP48Q86UV5 1035 aa10.38□□□□□ -0.75
SYNE1-205ENST00000367251 CKAP2LQ8IYA6 745 aa10.38□□□□□ -0.75
SYNE1-205ENST00000367251 LINS1Q8NG48 757 aa10.38□□□□□ -0.75
SYNE1-205ENST00000367251 ORC3Q9UBD5 711 aaPredicted RBP10.38□□□□□ -0.75
SYNE1-205ENST00000367251 SBNO2Q9Y2G9 1366 aa10.38□□□□□ -0.75
SYNE1-205ENST00000367251 GOLGA6L7A0A1B0GV03 622 aa10.38□□□□□ -0.75
SYNE1-205ENST00000367251 FAM177A1Q8N128 213 aaPredicted RBP10.38□□□□□ -0.75
SYNE1-205ENST00000367251 DNAJC5BQ9UF47 199 aa10.38□□□□□ -0.75
SYNE1-205ENST00000367251 RBM8AQ9Y5S9 174 aaKnown RBP10.38□□□□□ -0.75
SYNE1-205ENST00000367251 USO1O60763 962 aaKnown RBP10.38□□□□□ -0.75
SYNE1-205ENST00000367251 METAP2P50579 478 aaKnown RBP eCLIP10.38□□□□□ -0.75
SYNE1-205ENST00000367251 ENOX2Q16206 610 aaKnown RBP10.38□□□□□ -0.75
SYNE1-205ENST00000367251 CHPF2Q9P2E5 772 aa10.38□□□□□ -0.75
SYNE1-205ENST00000367251 CBX1P83916 185 aa10.37□□□□□ -0.75
SYNE1-205ENST00000367251 CDC5LQ99459 802 aaKnown RBP10.37□□□□□ -0.75
SYNE1-205ENST00000367251 GTPBP4Q9BZE4 634 aaKnown RBP10.37□□□□□ -0.75
SYNE1-205ENST00000367251 RMND1Q9NWS8 449 aa10.37□□□□□ -0.75
SYNE1-205ENST00000367251 ZKSCAN5Q9Y2L8 839 aa10.37□□□□□ -0.75
SYNE1-205ENST00000367251 CFAP74Q9C0B2 1584 aa10.37□□□□□ -0.75
SYNE1-205ENST00000367251 POTEJP0CG39 1038 aa10.37□□□□□ -0.75
SYNE1-205ENST00000367251 CTAGE1Q96RT6 745 aa10.37□□□□□ -0.75
SYNE1-205ENST00000367251 HOMER2Q9NSB8 354 aa10.37□□□□□ -0.75
SYNE1-205ENST00000367251 PODXL2Q9NZ53 605 aa10.37□□□□□ -0.75
SYNE1-205ENST00000367251 RBM27Q9P2N5 1060 aaKnown RBP10.37□□□□□ -0.75
SYNE1-205ENST00000367251 ABCF2Q9UG63 623 aa10.37□□□□□ -0.75
SYNE1-205ENST00000367251 TUBB4BP68371 445 aa10.37□□□□□ -0.75
SYNE1-205ENST00000367251 EHBP1Q8NDI1 1231 aa10.37□□□□□ -0.75
SYNE1-205ENST00000367251 CRACR2AQ9BSW2 395 aa10.37□□□□□ -0.75
SYNE1-205ENST00000367251 SYNMO15061 1565 aa10.37□□□□□ -0.75
SYNE1-205ENST00000367251 TMEM67Q5HYA8 995 aa10.37□□□□□ -0.75
SYNE1-205ENST00000367251 SPTY2D1Q68D10 685 aaPredicted RBP10.37□□□□□ -0.75
SYNE1-205ENST00000367251 VPS36Q86VN1 386 aa10.37□□□□□ -0.75
SYNE1-205ENST00000367251 SNW1Q13573 536 aaKnown RBP10.36□□□□□ -0.75
SYNE1-205ENST00000367251 MTHFSDQ2M296 383 aaKnown RBP10.36□□□□□ -0.75
SYNE1-205ENST00000367251 MFSD6Q6ZSS7 791 aa10.36□□□□□ -0.75
SYNE1-205ENST00000367251 MKNK2Q9HBH9 465 aa10.36□□□□□ -0.75
SYNE1-205ENST00000367251 KDM5CP41229 1560 aa10.36□□□□□ -0.75
SYNE1-205ENST00000367251 URI1O94763 535 aaPredicted RBP10.36□□□□□ -0.75
SYNE1-205ENST00000367251 LDHCP07864 332 aa10.36□□□□□ -0.75
SYNE1-205ENST00000367251 CCDC194A0A1B0GVG4 234 aa10.36□□□□□ -0.75
SYNE1-205ENST00000367251 CCT2P78371 535 aaKnown RBP10.36□□□□□ -0.75
SYNE1-205ENST00000367251 MRPS27Q92552 414 aaKnown RBP10.36□□□□□ -0.75
SYNE1-205ENST00000367251 CCDC102AQ96A19 550 aa10.36□□□□□ -0.75
SYNE1-205ENST00000367251 FAM107BQ9H098 131 aa10.36□□□□□ -0.75
SYNE1-205ENST00000367251 MINDY4BA8MYZ0 360 aa10.36□□□□□ -0.75
SYNE1-205ENST00000367251 PTCD1O75127 700 aaKnown RBP10.36□□□□□ -0.75
SYNE1-205ENST00000367251 CHMLP26374 656 aa10.36□□□□□ -0.75
SYNE1-205ENST00000367251 KIF4BQ2VIQ3 1234 aa10.36□□□□□ -0.75
SYNE1-205ENST00000367251 CEP135Q66GS9 1140 aa10.36□□□□□ -0.75
SYNE1-205ENST00000367251 UBE3BQ7Z3V4 1068 aa10.36□□□□□ -0.75
SYNE1-205ENST00000367251 TMC6Q7Z403 805 aa10.36□□□□□ -0.75
SYNE1-205ENST00000367251 PTPRTO14522 1441 aa10.36□□□□□ -0.75
SYNE1-205ENST00000367251 POLR3DP05423 398 aaPredicted RBP10.36□□□□□ -0.75
SYNE1-205ENST00000367251 SRRTQ9BXP5 876 aaKnown RBP10.36□□□□□ -0.75
SYNE1-205ENST00000367251 NLRP5P59047 1200 aa10.35□□□□□ -0.75
SYNE1-205ENST00000367251 ZNF444Q8N0Y2 327 aaPredicted RBP10.35□□□□□ -0.75
SYNE1-205ENST00000367251 FEZ1Q99689 392 aa10.35□□□□□ -0.75
SYNE1-205ENST00000367251 PLCD4Q9BRC7 762 aa10.35□□□□□ -0.75
SYNE1-205ENST00000367251 GDPD2Q9HCC8 539 aa10.35□□□□□ -0.75
SYNE1-205ENST00000367251 TFIP11Q9UBB9 837 aaKnown RBP10.35□□□□□ -0.75
SYNE1-205ENST00000367251 FOXO3O43524 673 aa10.35□□□□□ -0.75
SYNE1-205ENST00000367251 PDE4BQ07343 736 aa10.35□□□□□ -0.75
SYNE1-205ENST00000367251 BMS1Q14692 1282 aaKnown RBP10.35□□□□□ -0.75
SYNE1-205ENST00000367251 DZIP1Q86YF9 867 aaKnown RBP10.35□□□□□ -0.75
SYNE1-205ENST00000367251 PKNOX2Q96KN3 472 aa10.35□□□□□ -0.75
SYNE1-205ENST00000367251 CNPY2Q9Y2B0 182 aa10.35□□□□□ -0.75
SYNE1-205ENST00000367251 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.35□□□□□ -0.75
SYNE1-205ENST00000367251 SBNO1A3KN83 1393 aa10.35□□□□□ -0.75
SYNE1-205ENST00000367251 KIAA0232Q92628 1395 aa10.35□□□□□ -0.75
SYNE1-205ENST00000367251 SPAG1Q07617 926 aa10.35□□□□□ -0.75
SYNE1-205ENST00000367251 NOLC1Q14978 699 aaKnown RBP eCLIP10.35□□□□□ -0.75
SYNE1-205ENST00000367251 LDHAL6AQ6ZMR3 332 aa10.35□□□□□ -0.75
SYNE1-205ENST00000367251 CADPS2Q86UW7 1296 aa10.35□□□□□ -0.75
SYNE1-205ENST00000367251 MAGI3Q5TCQ9 1506 aa10.35□□□□□ -0.75
SYNE1-205ENST00000367251 HCLS1P14317 486 aaPredicted RBP10.34□□□□□ -0.75
SYNE1-205ENST00000367251 PPP4R3BQ5MIZ7 849 aa10.34□□□□□ -0.75
SYNE1-205ENST00000367251 RUFY3Q7L099 469 aa10.34□□□□□ -0.75
SYNE1-205ENST00000367251 ZMYND15Q9H091 742 aa10.34□□□□□ -0.75
SYNE1-205ENST00000367251 CALCOCO1Q9P1Z2 691 aa10.34□□□□□ -0.75
SYNE1-205ENST00000367251 NPHP3Q7Z494 1330 aa10.34□□□□□ -0.75
SYNE1-205ENST00000367251 IL13P35225 146 aa10.34□□□□□ -0.75
SYNE1-205ENST00000367251 GUCY1B3Q02153 619 aa10.34□□□□□ -0.75
SYNE1-205ENST00000367251 BRF1Q92994 677 aa10.34□□□□□ -0.75
SYNE1-205ENST00000367251 NUP88Q99567 741 aaPredicted RBP10.34□□□□□ -0.75
SYNE1-205ENST00000367251 EHMT1Q9H9B1 1298 aa10.34□□□□□ -0.75
SYNE1-205ENST00000367251 GNAT2P19087 354 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms