RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 MAP2K1Q02750 393 aaPredicted RBP16.16■□□□□ 0.18
MRPL55-209ENST00000366735 WDR43Q15061 677 aaKnown RBP eCLIP16.16■□□□□ 0.18
MRPL55-209ENST00000366735 PDIA6Q15084 440 aa16.16■□□□□ 0.18
MRPL55-209ENST00000366735 AOC3Q16853 763 aa16.16■□□□□ 0.18
MRPL55-209ENST00000366735 DPP8Q6V1X1 898 aaPredicted RBP16.16■□□□□ 0.18
MRPL55-209ENST00000366735 DDX46Q7L014 1031 aaKnown RBP16.16■□□□□ 0.18
MRPL55-209ENST00000366735 LRP10Q7Z4F1 713 aa16.16■□□□□ 0.18
MRPL55-209ENST00000366735 DDX21Q9NR30 783 aaKnown RBP eCLIP16.16■□□□□ 0.18
MRPL55-209ENST00000366735 AIMP1Q12904 312 aaKnown RBP16.15■□□□□ 0.18
MRPL55-209ENST00000366735 COPS6Q7L5N1 327 aa16.15■□□□□ 0.18
MRPL55-209ENST00000366735 ADARB2Q9NS39 739 aaKnown RBP16.15■□□□□ 0.18
MRPL55-209ENST00000366735 TRMT112Q9UI30 125 aaKnown RBP16.15■□□□□ 0.18
MRPL55-209ENST00000366735 WDR33Q9C0J8 1336 aaKnown RBP16.15■□□□□ 0.18
MRPL55-209ENST00000366735 ANXA1P04083 346 aa16.14■□□□□ 0.17
MRPL55-209ENST00000366735 HOXB7P09629 217 aa16.14■□□□□ 0.17
MRPL55-209ENST00000366735 EPS15P42566 896 aa16.14■□□□□ 0.17
MRPL55-209ENST00000366735 PROSER3Q2NL68 480 aa16.14■□□□□ 0.17
MRPL55-209ENST00000366735 C3orf67Q6ZVT6 689 aa16.14■□□□□ 0.17
MRPL55-209ENST00000366735 PAXIP1Q6ZW49 1069 aaPredicted RBP16.14■□□□□ 0.17
MRPL55-209ENST00000366735 NLRP10Q86W26 655 aa16.14■□□□□ 0.17
MRPL55-209ENST00000366735 SP8Q8IXZ3 490 aa16.14■□□□□ 0.17
MRPL55-209ENST00000366735 MIER1Q8N108 512 aa16.14■□□□□ 0.17
MRPL55-209ENST00000366735 MPNDQ8N594 471 aa16.14■□□□□ 0.17
MRPL55-209ENST00000366735 XAGE3Q8WTP9 111 aa16.14■□□□□ 0.17
MRPL55-209ENST00000366735 BEGAINQ9BUH8 593 aa16.14■□□□□ 0.17
MRPL55-209ENST00000366735 RTFDC1Q9BY42 306 aaPredicted RBP16.14■□□□□ 0.17
MRPL55-209ENST00000366735 GPRC5DQ9NZD1 345 aa16.14■□□□□ 0.17
MRPL55-209ENST00000366735 ZNRF3Q9ULT6 936 aa16.14■□□□□ 0.17
MRPL55-209ENST00000366735 MKRN4PQ13434 485 aaPredicted RBP16.13■□□□□ 0.17
MRPL55-209ENST00000366735 TCIRG1Q13488 830 aa16.13■□□□□ 0.17
MRPL55-209ENST00000366735 GRAPQ13588 217 aa16.13■□□□□ 0.17
MRPL55-209ENST00000366735 TNIP1Q15025 636 aa16.13■□□□□ 0.17
MRPL55-209ENST00000366735 NEUROD2Q15784 382 aa16.13■□□□□ 0.17
MRPL55-209ENST00000366735 GRAPLQ8TC17 118 aaPredicted RBP16.13■□□□□ 0.17
MRPL55-209ENST00000366735 NECTIN2Q92692 538 aa16.13■□□□□ 0.17
MRPL55-209ENST00000366735 RUNDC1Q96C34 613 aa16.13■□□□□ 0.17
MRPL55-209ENST00000366735 WBP1LQ9NX94 342 aa16.13■□□□□ 0.17
MRPL55-209ENST00000366735 MYH3P11055 1940 aa16.12■□□□□ 0.17
MRPL55-209ENST00000366735 KIAA2012Q0VF49 1180 aa16.12■□□□□ 0.17
MRPL55-209ENST00000366735 HDGFL1Q5TGJ6 251 aa16.12■□□□□ 0.17
MRPL55-209ENST00000366735 CIAPIN1Q6FI81 312 aa16.12■□□□□ 0.17
MRPL55-209ENST00000366735 BCL2L13Q9BXK5 485 aa16.12■□□□□ 0.17
MRPL55-209ENST00000366735 LAS1LQ9Y4W2 734 aaKnown RBP16.12■□□□□ 0.17
MRPL55-209ENST00000366735 DUOX1Q9NRD9 1551 aa16.12■□□□□ 0.17
MRPL55-209ENST00000366735 PSME4Q14997 1843 aa16.11■□□□□ 0.17
MRPL55-209ENST00000366735 HCLS1P14317 486 aaPredicted RBP16.11■□□□□ 0.17
MRPL55-209ENST00000366735 PLBD2Q8NHP8 589 aa16.11■□□□□ 0.17
MRPL55-209ENST00000366735 DBF4Q9UBU7 674 aaPredicted RBP16.11■□□□□ 0.17
MRPL55-209ENST00000366735 CHL1O00533 1208 aa16.1■□□□□ 0.17
MRPL55-209ENST00000366735 CXCL9Q07325 125 aa16.1■□□□□ 0.17
MRPL55-209ENST00000366735 CCDC146Q8IYE0 955 aa16.1■□□□□ 0.17
MRPL55-209ENST00000366735 CAPNS2Q96L46 248 aa16.1■□□□□ 0.17
MRPL55-209ENST00000366735 CHPF2Q9P2E5 772 aa16.1■□□□□ 0.17
MRPL55-209ENST00000366735 POLR2AP24928 1970 aaKnown RBP16.09■□□□□ 0.17
MRPL55-209ENST00000366735 HSP90B1P14625 803 aaKnown RBP16.09■□□□□ 0.17
MRPL55-209ENST00000366735 GMPSP49915 693 aaPredicted RBP16.09■□□□□ 0.17
MRPL55-209ENST00000366735 LBX1P52954 281 aa16.09■□□□□ 0.17
MRPL55-209ENST00000366735 ANKRD13DQ6ZTN6 518 aa16.08■□□□□ 0.16
MRPL55-209ENST00000366735 ZC3H15Q8WU90 426 aaKnown RBP16.08■□□□□ 0.16
MRPL55-209ENST00000366735 HYPKQ9NX55 129 aa16.08■□□□□ 0.16
MRPL55-209ENST00000366735 TLL2Q9Y6L7 1015 aa16.08■□□□□ 0.16
MRPL55-209ENST00000366735 H7C1D1 291 aa16.07■□□□□ 0.16
MRPL55-209ENST00000366735 HSPA8P11142 646 aaKnown RBP16.07■□□□□ 0.16
MRPL55-209ENST00000366735 CALD1Q05682 793 aaKnown RBP16.07■□□□□ 0.16
MRPL55-209ENST00000366735 GRM1Q13255 1194 aa16.07■□□□□ 0.16
MRPL55-209ENST00000366735 SLC51AQ86UW1 340 aa16.07■□□□□ 0.16
MRPL55-209ENST00000366735 EYA3Q99504 573 aa16.07■□□□□ 0.16
MRPL55-209ENST00000366735 SPEF2Q9C093 1822 aa16.07■□□□□ 0.16
MRPL55-209ENST00000366735 AKAP11Q9UKA4 1901 aa16.07■□□□□ 0.16
MRPL55-209ENST00000366735 RAD17O75943 681 aa16.06■□□□□ 0.16
MRPL55-209ENST00000366735 GOLGA2Q08379 1002 aa16.06■□□□□ 0.16
MRPL55-209ENST00000366735 HHIPL1Q96JK4 782 aa16.06■□□□□ 0.16
MRPL55-209ENST00000366735 CFAP44Q96MT7 982 aa16.06■□□□□ 0.16
MRPL55-209ENST00000366735 GPR101Q96P66 508 aaPredicted RBP16.06■□□□□ 0.16
MRPL55-209ENST00000366735 CHMP4AQ9BY43 222 aa16.06■□□□□ 0.16
MRPL55-209ENST00000366735 TRAF5O00463 557 aa16.05■□□□□ 0.16
MRPL55-209ENST00000366735 CA12O43570 354 aa16.05■□□□□ 0.16
MRPL55-209ENST00000366735 CELF2O95319 508 aaKnown RBP16.05■□□□□ 0.16
MRPL55-209ENST00000366735 MAP2K2P36507 400 aa16.05■□□□□ 0.16
MRPL55-209ENST00000366735 SF3B3Q15393 1217 aaKnown RBP16.05■□□□□ 0.16
MRPL55-209ENST00000366735 KRT24Q2M2I5 525 aa16.05■□□□□ 0.16
MRPL55-209ENST00000366735 WASHC4Q2M389 1173 aa16.05■□□□□ 0.16
MRPL55-209ENST00000366735 CYP4F22Q6NT55 531 aa16.05■□□□□ 0.16
MRPL55-209ENST00000366735 BBXQ8WY36 941 aaPredicted RBP16.05■□□□□ 0.16
MRPL55-209ENST00000366735 ISCA1Q9BUE6 129 aa16.05■□□□□ 0.16
MRPL55-209ENST00000366735 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.05■□□□□ 0.16
MRPL55-209ENST00000366735 TRIM35Q9UPQ4 493 aa16.05■□□□□ 0.16
MRPL55-209ENST00000366735 CACNA1FO60840 1977 aa16.05■□□□□ 0.16
MRPL55-209ENST00000366735 DUSP27Q5VZP5 1158 aa16.04■□□□□ 0.16
MRPL55-209ENST00000366735 CST9Q5W186 159 aa16.04■□□□□ 0.16
MRPL55-209ENST00000366735 CDC37L1Q7L3B6 337 aa16.04■□□□□ 0.16
MRPL55-209ENST00000366735 DPF2Q92785 391 aa16.04■□□□□ 0.16
MRPL55-209ENST00000366735 FAM89AQ96GI7 184 aa16.04■□□□□ 0.16
MRPL55-209ENST00000366735 PGAP2Q9UHJ9 254 aa16.04■□□□□ 0.16
MRPL55-209ENST00000366735 NSFL1CQ9UNZ2 370 aaKnown RBP16.04■□□□□ 0.16
MRPL55-209ENST00000366735 SCN9AQ15858 1988 aa16.04■□□□□ 0.16
MRPL55-209ENST00000366735 C6orf229H3BNL8 230 aa16.03■□□□□ 0.16
MRPL55-209ENST00000366735 ANP32CO43423 234 aa16.03■□□□□ 0.16
MRPL55-209ENST00000366735 RPS12P25398 132 aaKnown RBP16.03■□□□□ 0.16
MRPL55-209ENST00000366735 RIC3Q7Z5B4 369 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 152.5 ms