RNA–Protein interactions for RNA: ENST00000366699.3

TRIM11-202, Transcript of tripartite motif containing 11, humanhuman

TSL 2 BASIC

Gene TRIM11, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-202ENST00000366699 CPA1P15085 419 aa20.87■□□□□ 0.93
TRIM11-202ENST00000366699 LMBR1LQ6UX01 489 aa20.87■□□□□ 0.93
TRIM11-202ENST00000366699 HMG20BQ9P0W2 317 aa20.87■□□□□ 0.93
TRIM11-202ENST00000366699 ANKRD1Q15327 319 aa20.86■□□□□ 0.93
TRIM11-202ENST00000366699 CCDC191Q8NCU4 936 aa20.86■□□□□ 0.93
TRIM11-202ENST00000366699 DDX54Q8TDD1 881 aaKnown RBP20.86■□□□□ 0.93
TRIM11-202ENST00000366699 LARP6Q9BRS8 491 aaKnown RBP20.86■□□□□ 0.93
TRIM11-202ENST00000366699 DBNLQ9UJU6 430 aaKnown RBP20.86■□□□□ 0.93
TRIM11-202ENST00000366699 F13A1P00488 732 aa20.86■□□□□ 0.93
TRIM11-202ENST00000366699 ARFGEF2Q9Y6D5 1785 aa20.86■□□□□ 0.93
TRIM11-202ENST00000366699 GLI3P10071 1580 aa20.86■□□□□ 0.93
TRIM11-202ENST00000366699 MED23Q9ULK4 1368 aa20.85■□□□□ 0.93
TRIM11-202ENST00000366699 A0A0D9SFI3 127 aa20.85■□□□□ 0.93
TRIM11-202ENST00000366699 SLC27A2O14975 620 aa20.85■□□□□ 0.93
TRIM11-202ENST00000366699 CHMP3Q9Y3E7 222 aa20.85■□□□□ 0.93
TRIM11-202ENST00000366699 CCDC83Q8IWF9 413 aa20.84■□□□□ 0.93
TRIM11-202ENST00000366699 STRN4Q9NRL3 753 aa20.84■□□□□ 0.93
TRIM11-202ENST00000366699 AFDNP55196 1824 aaKnown RBP20.84■□□□□ 0.93
TRIM11-202ENST00000366699 LARGE1O95461 756 aa20.84■□□□□ 0.93
TRIM11-202ENST00000366699 FOXO4P98177 505 aa20.84■□□□□ 0.93
TRIM11-202ENST00000366699 TICAM2Q86XR7 235 aa20.84■□□□□ 0.93
TRIM11-202ENST00000366699 NOL7Q9UMY1 257 aaKnown RBP20.84■□□□□ 0.93
TRIM11-202ENST00000366699 CNPY2Q9Y2B0 182 aa20.84■□□□□ 0.93
TRIM11-202ENST00000366699 GJB2P29033 226 aa20.83■□□□□ 0.93
TRIM11-202ENST00000366699 UBE2HP62256 183 aa20.83■□□□□ 0.93
TRIM11-202ENST00000366699 CSPP1Q1MSJ5 1256 aa20.83■□□□□ 0.93
TRIM11-202ENST00000366699 TTLL7Q6ZT98 887 aa20.83■□□□□ 0.93
TRIM11-202ENST00000366699 GPR108Q9NPR9 543 aa20.83■□□□□ 0.93
TRIM11-202ENST00000366699 A1BGP04217 495 aa20.83■□□□□ 0.92
TRIM11-202ENST00000366699 KRT32Q14532 448 aa20.83■□□□□ 0.92
TRIM11-202ENST00000366699 HAUS7Q99871 368 aa20.83■□□□□ 0.92
TRIM11-202ENST00000366699 KCPQ6ZWJ8 1503 aa20.83■□□□□ 0.92
TRIM11-202ENST00000366699 LETM1O95202 739 aaPredicted RBP20.82■□□□□ 0.92
TRIM11-202ENST00000366699 TSGA10IPQ3SY00 556 aa20.82■□□□□ 0.92
TRIM11-202ENST00000366699 BLOC1S2Q6QNY1 142 aa20.82■□□□□ 0.92
TRIM11-202ENST00000366699 TEX13AQ9BXU3 409 aaPredicted RBP20.82■□□□□ 0.92
TRIM11-202ENST00000366699 ALDH8A1Q9H2A2 487 aaPredicted RBP20.82■□□□□ 0.92
TRIM11-202ENST00000366699 IL15P40933 162 aaPredicted RBP20.82■□□□□ 0.92
TRIM11-202ENST00000366699 CCDC183Q5T5S1 534 aa20.82■□□□□ 0.92
TRIM11-202ENST00000366699 ATG3Q9NT62 314 aa20.82■□□□□ 0.92
TRIM11-202ENST00000366699 TMOD3Q9NYL9 352 aa20.82■□□□□ 0.92
TRIM11-202ENST00000366699 TNS2Q63HR2 1409 aa20.82■□□□□ 0.92
TRIM11-202ENST00000366699 JCADQ9P266 1359 aa20.82■□□□□ 0.92
TRIM11-202ENST00000366699 FAM184AQ8NB25 1140 aa20.81■□□□□ 0.92
TRIM11-202ENST00000366699 RNF214Q8ND24 703 aa20.81■□□□□ 0.92
TRIM11-202ENST00000366699 KLHL34Q8N239 644 aa20.81■□□□□ 0.92
TRIM11-202ENST00000366699 DBNDD2Q9BQY9 259 aa20.81■□□□□ 0.92
TRIM11-202ENST00000366699 ME3Q16798 604 aa20.8■□□□□ 0.92
TRIM11-202ENST00000366699 DNAJC2Q99543 621 aaKnown RBP20.8■□□□□ 0.92
TRIM11-202ENST00000366699 ZBTB3Q9H5J0 574 aa20.8■□□□□ 0.92
TRIM11-202ENST00000366699 UBR2Q8IWV8 1755 aa20.8■□□□□ 0.92
TRIM11-202ENST00000366699 TAF5LO75529 589 aa20.8■□□□□ 0.92
TRIM11-202ENST00000366699 MTMR6Q9Y217 621 aa20.8■□□□□ 0.92
TRIM11-202ENST00000366699 MCM5P33992 734 aa20.79■□□□□ 0.92
TRIM11-202ENST00000366699 USPL1Q5W0Q7 1092 aa20.79■□□□□ 0.92
TRIM11-202ENST00000366699 CCDC39Q9UFE4 941 aa20.79■□□□□ 0.92
TRIM11-202ENST00000366699 U3KPZ7 1027 aaPredicted RBP20.79■□□□□ 0.92
TRIM11-202ENST00000366699 PAPPAQ13219 1627 aa20.78■□□□□ 0.92
TRIM11-202ENST00000366699 CIAO1O76071 339 aa20.78■□□□□ 0.92
TRIM11-202ENST00000366699 RPS6KB1P23443 525 aa20.78■□□□□ 0.92
TRIM11-202ENST00000366699 MCMDC2Q4G0Z9 681 aa20.78■□□□□ 0.92
TRIM11-202ENST00000366699 ZNF589Q86UQ0 364 aaPredicted RBP20.78■□□□□ 0.92
TRIM11-202ENST00000366699 VSIG10Q8N0Z9 540 aa20.78■□□□□ 0.92
TRIM11-202ENST00000366699 TPCN1Q9ULQ1 816 aa20.78■□□□□ 0.92
TRIM11-202ENST00000366699 UVSSAQ2YD98 709 aa20.78■□□□□ 0.92
TRIM11-202ENST00000366699 ZNF500O60304 480 aaPredicted RBP20.77■□□□□ 0.92
TRIM11-202ENST00000366699 ATG9AQ7Z3C6 839 aa20.77■□□□□ 0.92
TRIM11-202ENST00000366699 KBTBD3Q8NAB2 608 aa20.77■□□□□ 0.92
TRIM11-202ENST00000366699 EDC3Q96F86 508 aaKnown RBP20.77■□□□□ 0.92
TRIM11-202ENST00000366699 NEUROD6Q96NK8 337 aa20.77■□□□□ 0.92
TRIM11-202ENST00000366699 EYA2O00167 538 aa20.77■□□□□ 0.92
TRIM11-202ENST00000366699 FIBPO43427 364 aa20.77■□□□□ 0.92
TRIM11-202ENST00000366699 OFD1O75665 1012 aa20.77■□□□□ 0.92
TRIM11-202ENST00000366699 PDCP20941 246 aa20.77■□□□□ 0.92
TRIM11-202ENST00000366699 ZKSCAN5Q9Y2L8 839 aa20.77■□□□□ 0.92
TRIM11-202ENST00000366699 ST3GAL1Q11201 340 aa20.76■□□□□ 0.91
TRIM11-202ENST00000366699 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.76■□□□□ 0.91
TRIM11-202ENST00000366699 KIF6Q6ZMV9 814 aa20.76■□□□□ 0.91
TRIM11-202ENST00000366699 FBXO3Q9UK99 471 aa20.76■□□□□ 0.91
TRIM11-202ENST00000366699 STARD3NLO95772 234 aa20.75■□□□□ 0.91
TRIM11-202ENST00000366699 TRIM28Q13263 835 aaKnown RBP20.75■□□□□ 0.91
TRIM11-202ENST00000366699 TCIRG1Q13488 830 aa20.75■□□□□ 0.91
TRIM11-202ENST00000366699 NECAB1Q8N987 351 aa20.75■□□□□ 0.91
TRIM11-202ENST00000366699 ISCA1Q9BUE6 129 aa20.75■□□□□ 0.91
TRIM11-202ENST00000366699 VPS37CA5D8V6 355 aaPredicted RBP20.75■□□□□ 0.91
TRIM11-202ENST00000366699 DNM1Q05193 864 aaKnown RBP20.75■□□□□ 0.91
TRIM11-202ENST00000366699 LARP1BQ659C4 914 aaKnown RBP20.75■□□□□ 0.91
TRIM11-202ENST00000366699 SH3TC1Q8TE82 1336 aa20.75■□□□□ 0.91
TRIM11-202ENST00000366699 CCDC57Q2TAC2 916 aa20.74■□□□□ 0.91
TRIM11-202ENST00000366699 HELLSQ9NRZ9 838 aa20.74■□□□□ 0.91
TRIM11-202ENST00000366699 PAG1Q9NWQ8 432 aa20.74■□□□□ 0.91
TRIM11-202ENST00000366699 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.74■□□□□ 0.91
TRIM11-202ENST00000366699 PALLDQ8WX93 1383 aa20.74■□□□□ 0.91
TRIM11-202ENST00000366699 NUP188Q5SRE5 1749 aa20.74■□□□□ 0.91
TRIM11-202ENST00000366699 DDX46Q7L014 1031 aaKnown RBP20.74■□□□□ 0.91
TRIM11-202ENST00000366699 ABCA3Q99758 1704 aa20.74■□□□□ 0.91
TRIM11-202ENST00000366699 NEK1Q96PY6 1258 aa20.73■□□□□ 0.91
TRIM11-202ENST00000366699 TPM2P07951 284 aa20.73■□□□□ 0.91
TRIM11-202ENST00000366699 LRRFIP1Q32MZ4 808 aaKnown RBP20.73■□□□□ 0.91
TRIM11-202ENST00000366699 CEP126Q9P2H0 1117 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms