RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 AGGF1Q8N302 714 aaeCLIP1.5□□□□□ -2.17
RNU6-54P-201ENST00000365563 TTC9Q92623 222 aa1.5□□□□□ -2.17
RNU6-54P-201ENST00000365563 SIRT1Q96EB6 747 aa1.5□□□□□ -2.17
RNU6-54P-201ENST00000365563 FAM46AQ96IP4 442 aaKnown RBP1.5□□□□□ -2.17
RNU6-54P-201ENST00000365563 MFSD14AQ96MC6 490 aa1.5□□□□□ -2.17
RNU6-54P-201ENST00000365563 CEP63Q96MT8 703 aa1.5□□□□□ -2.17
RNU6-54P-201ENST00000365563 UBL7Q96S82 380 aaPredicted RBP1.5□□□□□ -2.17
RNU6-54P-201ENST00000365563 PAK6Q9NQU5 681 aaPredicted RBP1.5□□□□□ -2.17
RNU6-54P-201ENST00000365563 CABP1Q9NZU7 370 aa1.5□□□□□ -2.17
RNU6-54P-201ENST00000365563 ANKIB1Q9P2G1 1089 aa1.5□□□□□ -2.17
RNU6-54P-201ENST00000365563 NFIBO00712 420 aa1.49□□□□□ -2.17
RNU6-54P-201ENST00000365563 CDK2AP1O14519 115 aa1.49□□□□□ -2.17
RNU6-54P-201ENST00000365563 CYP26A1O43174 497 aa1.49□□□□□ -2.17
RNU6-54P-201ENST00000365563 FOXD2O60548 495 aaPredicted RBP1.49□□□□□ -2.17
RNU6-54P-201ENST00000365563 INHAP05111 366 aa1.49□□□□□ -2.17
RNU6-54P-201ENST00000365563 ADRB1P08588 477 aa1.49□□□□□ -2.17
RNU6-54P-201ENST00000365563 BMP3P12645 472 aa1.49□□□□□ -2.17
RNU6-54P-201ENST00000365563 CPB1P15086 417 aa1.49□□□□□ -2.17
RNU6-54P-201ENST00000365563 HOXA5P20719 270 aa1.49□□□□□ -2.17
RNU6-54P-201ENST00000365563 BRPF1P55201 1214 aaPredicted RBP1.49□□□□□ -2.17
RNU6-54P-201ENST00000365563 KRTAP10-9P60411 292 aa1.49□□□□□ -2.17
RNU6-54P-201ENST00000365563 USP4Q13107 963 aa1.49□□□□□ -2.17
RNU6-54P-201ENST00000365563 NFIXQ14938 502 aa1.49□□□□□ -2.17
RNU6-54P-201ENST00000365563 COL19A1Q14993 1142 aa1.49□□□□□ -2.17
RNU6-54P-201ENST00000365563 ACAD11Q709F0 780 aa1.49□□□□□ -2.17
RNU6-54P-201ENST00000365563 PRRT2Q7Z6L0 340 aaPredicted RBP1.49□□□□□ -2.17
RNU6-54P-201ENST00000365563 RHPN1Q8TCX5 695 aa1.49□□□□□ -2.17
RNU6-54P-201ENST00000365563 RSPH6AQ9H0K4 717 aa1.49□□□□□ -2.17
RNU6-54P-201ENST00000365563 MUC3BQ9H195 1237 aa1.49□□□□□ -2.17
RNU6-54P-201ENST00000365563 RC3H2Q9HBD1 1191 aaKnown RBP1.49□□□□□ -2.17
RNU6-54P-201ENST00000365563 SLC5A6Q9Y289 635 aa1.49□□□□□ -2.17
RNU6-54P-201ENST00000365563 SOCS7O14512 581 aa1.48□□□□□ -2.17
RNU6-54P-201ENST00000365563 GAS2O43903 313 aaKnown RBP1.48□□□□□ -2.17
RNU6-54P-201ENST00000365563 GDF10P55107 478 aa1.48□□□□□ -2.17
RNU6-54P-201ENST00000365563 GRIK5Q16478 980 aa1.48□□□□□ -2.17
RNU6-54P-201ENST00000365563 MLANAQ16655 118 aa1.48□□□□□ -2.17
RNU6-54P-201ENST00000365563 HIF1AQ16665 826 aa1.48□□□□□ -2.17
RNU6-54P-201ENST00000365563 ANKRD34AQ69YU3 496 aa1.48□□□□□ -2.17
RNU6-54P-201ENST00000365563 NFXL1Q6ZNB6 911 aa1.48□□□□□ -2.17
RNU6-54P-201ENST00000365563 GGNQ86UU5 652 aa1.48□□□□□ -2.17
RNU6-54P-201ENST00000365563 CACTIN-AS1Q8N1I8 211 aa1.48□□□□□ -2.17
RNU6-54P-201ENST00000365563 FBXL6Q8N531 539 aa1.48□□□□□ -2.17
RNU6-54P-201ENST00000365563 CRELD1Q96HD1 420 aa1.48□□□□□ -2.17
RNU6-54P-201ENST00000365563 LPIN3Q9BQK8 851 aa1.48□□□□□ -2.17
RNU6-54P-201ENST00000365563 ADAM19Q9H013 955 aa1.48□□□□□ -2.17
RNU6-54P-201ENST00000365563 GTF3C5Q9Y5Q8 519 aaPredicted RBP1.48□□□□□ -2.17
RNU6-54P-201ENST00000365563 A6NJY4 79 aa1.47□□□□□ -2.17
RNU6-54P-201ENST00000365563 AP1G2O75843 785 aa1.47□□□□□ -2.17
RNU6-54P-201ENST00000365563 NFKB1P19838 968 aa1.47□□□□□ -2.17
RNU6-54P-201ENST00000365563 TYRO3Q06418 890 aa1.47□□□□□ -2.17
RNU6-54P-201ENST00000365563 KCNMB1Q16558 191 aa1.47□□□□□ -2.17
RNU6-54P-201ENST00000365563 ZXDCQ2QGD7 858 aaPredicted RBP1.47□□□□□ -2.17
RNU6-54P-201ENST00000365563 PERM1Q5SV97 790 aa1.47□□□□□ -2.17
RNU6-54P-201ENST00000365563 SYDE1Q6ZW31 735 aaPredicted RBP1.47□□□□□ -2.17
RNU6-54P-201ENST00000365563 ZSWIM9Q86XI8 627 aa1.47□□□□□ -2.17
RNU6-54P-201ENST00000365563 GLIS3Q8NEA6 775 aa1.47□□□□□ -2.17
RNU6-54P-201ENST00000365563 MISP3Q96FF7 219 aa1.47□□□□□ -2.17
RNU6-54P-201ENST00000365563 SMG9Q9H0W8 520 aaKnown RBP1.47□□□□□ -2.17
RNU6-54P-201ENST00000365563 RBSNQ9H1K0 784 aa1.47□□□□□ -2.17
RNU6-54P-201ENST00000365563 ZCCHC4Q9H5U6 513 aa1.47□□□□□ -2.17
RNU6-54P-201ENST00000365563 PARD6AQ9NPB6 346 aa1.47□□□□□ -2.17
RNU6-54P-201ENST00000365563 SRRDQ9UH36 339 aa1.47□□□□□ -2.17
RNU6-54P-201ENST00000365563 DOLKQ9UPQ8 538 aa1.47□□□□□ -2.17
RNU6-54P-201ENST00000365563 EML1O00423 815 aa1.46□□□□□ -2.18
RNU6-54P-201ENST00000365563 BACH1O14867 736 aa1.46□□□□□ -2.18
RNU6-54P-201ENST00000365563 MAP3K6O95382 1288 aa1.46□□□□□ -2.18
RNU6-54P-201ENST00000365563 F13BP05160 661 aa1.46□□□□□ -2.18
RNU6-54P-201ENST00000365563 FBXO45P0C2W1 286 aa1.46□□□□□ -2.18
RNU6-54P-201ENST00000365563 USP17L8P0C7I0 530 aa1.46□□□□□ -2.18
RNU6-54P-201ENST00000365563 EPB42P16452 691 aa1.46□□□□□ -2.18
RNU6-54P-201ENST00000365563 EIF2AK2P19525 551 aaKnown RBP1.46□□□□□ -2.18
RNU6-54P-201ENST00000365563 MAP4P27816 1152 aaKnown RBP1.46□□□□□ -2.18
RNU6-54P-201ENST00000365563 RXRBP28702 533 aa1.46□□□□□ -2.18
RNU6-54P-201ENST00000365563 CD68P34810 354 aaPredicted RBP1.46□□□□□ -2.18
RNU6-54P-201ENST00000365563 TXLNAP40222 546 aa1.46□□□□□ -2.18
RNU6-54P-201ENST00000365563 SCNN1DP51172 638 aa1.46□□□□□ -2.18
RNU6-54P-201ENST00000365563 CYP27A1Q02318 531 aa1.46□□□□□ -2.18
RNU6-54P-201ENST00000365563 NR1H3Q13133 447 aa1.46□□□□□ -2.18
RNU6-54P-201ENST00000365563 CCINQ13939 588 aa1.46□□□□□ -2.18
RNU6-54P-201ENST00000365563 SETDB1Q15047 1291 aa1.46□□□□□ -2.18
RNU6-54P-201ENST00000365563 MTFR1Q15390 333 aa1.46□□□□□ -2.18
RNU6-54P-201ENST00000365563 FDX2Q6P4F2 183 aa1.46□□□□□ -2.18
RNU6-54P-201ENST00000365563 PAOXQ6QHF9 649 aa1.46□□□□□ -2.18
RNU6-54P-201ENST00000365563 PARP9Q8IXQ6 854 aa1.46□□□□□ -2.18
RNU6-54P-201ENST00000365563 ZNF295-AS1Q8N0V1 137 aa1.46□□□□□ -2.18
RNU6-54P-201ENST00000365563 IL22RA1Q8N6P7 574 aa1.46□□□□□ -2.18
RNU6-54P-201ENST00000365563 CXorf38Q8TB03 319 aa1.46□□□□□ -2.18
RNU6-54P-201ENST00000365563 C20orf173Q96LM9 149 aa1.46□□□□□ -2.18
RNU6-54P-201ENST00000365563 ZNF232Q9UNY5 417 aa1.46□□□□□ -2.18
RNU6-54P-201ENST00000365563 IQSEC3Q9UPP2 1182 aaPredicted RBP1.46□□□□□ -2.18
RNU6-54P-201ENST00000365563 CHMP3Q9Y3E7 222 aa1.46□□□□□ -2.18
RNU6-54P-201ENST00000365563 CNTNAP4Q9C0A0 1308 aa1.45□□□□□ -2.18
RNU6-54P-201ENST00000365563 TCAF2A6NFQ2 919 aa1.45□□□□□ -2.18
RNU6-54P-201ENST00000365563 SFI1A8K8P3 1242 aa1.45□□□□□ -2.18
RNU6-54P-201ENST00000365563 NPIPB6E9PJ23 425 aa1.45□□□□□ -2.18
RNU6-54P-201ENST00000365563 NUAK1O60285 661 aa1.45□□□□□ -2.18
RNU6-54P-201ENST00000365563 CELA3BP08861 270 aa1.45□□□□□ -2.18
RNU6-54P-201ENST00000365563 TMEM253P0C7T8 217 aa1.45□□□□□ -2.18
RNU6-54P-201ENST00000365563 C1QTNF9P0C862 333 aa1.45□□□□□ -2.18
RNU6-54P-201ENST00000365563 FUT4P22083 530 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms