RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 VAV2P52735 878 aa15.3■□□□□ 0.04
CCDC144A-203ENST00000360495 POTEDQ86YR6 584 aa15.3■□□□□ 0.04
CCDC144A-203ENST00000360495 PPFIBP2Q8ND30 876 aa15.3■□□□□ 0.04
CCDC144A-203ENST00000360495 IQCA1Q86XH1 822 aa15.3■□□□□ 0.04
CCDC144A-203ENST00000360495 RANBP6O60518 1105 aaKnown RBP15.29■□□□□ 0.04
CCDC144A-203ENST00000360495 CCDC144CPQ8IYA2 1237 aa15.29■□□□□ 0.04
CCDC144A-203ENST00000360495 A0A087WZG4 1122 aa15.29■□□□□ 0.04
CCDC144A-203ENST00000360495 KIF5AQ12840 1032 aa15.29■□□□□ 0.04
CCDC144A-203ENST00000360495 HDAC1Q13547 482 aaPredicted RBP15.29■□□□□ 0.04
CCDC144A-203ENST00000360495 ZFYP08048 801 aaPredicted RBP15.29■□□□□ 0.04
CCDC144A-203ENST00000360495 SDSP20132 328 aa15.29■□□□□ 0.04
CCDC144A-203ENST00000360495 CFAP58Q5T655 872 aa15.29■□□□□ 0.04
CCDC144A-203ENST00000360495 IFT81Q8WYA0 676 aa15.29■□□□□ 0.04
CCDC144A-203ENST00000360495 PLVAPQ9BX97 442 aa15.29■□□□□ 0.04
CCDC144A-203ENST00000360495 GUCA1BQ9UMX6 200 aa15.29■□□□□ 0.04
CCDC144A-203ENST00000360495 CFTRP13569 1480 aa15.29■□□□□ 0.04
CCDC144A-203ENST00000360495 AFMP43652 599 aa15.28■□□□□ 0.04
CCDC144A-203ENST00000360495 TERF1P54274 439 aa15.28■□□□□ 0.04
CCDC144A-203ENST00000360495 GNAT3A8MTJ3 354 aa15.28■□□□□ 0.04
CCDC144A-203ENST00000360495 MPHOSPH10O00566 681 aaKnown RBP15.28■□□□□ 0.04
CCDC144A-203ENST00000360495 SETDB1Q15047 1291 aa15.28■□□□□ 0.04
CCDC144A-203ENST00000360495 DDX23Q9BUQ8 820 aaKnown RBP15.28■□□□□ 0.04
CCDC144A-203ENST00000360495 IFNKQ9P0W0 207 aa15.28■□□□□ 0.04
CCDC144A-203ENST00000360495 METAP2P50579 478 aaKnown RBP eCLIP15.28■□□□□ 0.04
CCDC144A-203ENST00000360495 RAB11FIP4Q86YS3 637 aa15.28■□□□□ 0.04
CCDC144A-203ENST00000360495 MIPOL1Q8TD10 442 aa15.28■□□□□ 0.04
CCDC144A-203ENST00000360495 TSNARE1Q96NA8 513 aa15.28■□□□□ 0.04
CCDC144A-203ENST00000360495 SPAG5Q96R06 1193 aa15.28■□□□□ 0.04
CCDC144A-203ENST00000360495 SMIM23A6NLE4 172 aa15.28■□□□□ 0.04
CCDC144A-203ENST00000360495 NOL3O60936 208 aaKnown RBP15.28■□□□□ 0.04
CCDC144A-203ENST00000360495 TNIP1Q15025 636 aa15.28■□□□□ 0.04
CCDC144A-203ENST00000360495 MICU3Q86XE3 530 aa15.28■□□□□ 0.04
CCDC144A-203ENST00000360495 RBSNQ9H1K0 784 aa15.28■□□□□ 0.04
CCDC144A-203ENST00000360495 RNF41Q9H4P4 317 aaPredicted RBP15.28■□□□□ 0.04
CCDC144A-203ENST00000360495 ZNF287Q9HBT7 754 aa15.28■□□□□ 0.04
CCDC144A-203ENST00000360495 EXOC1Q9NV70 894 aa15.28■□□□□ 0.04
CCDC144A-203ENST00000360495 IGF1RP08069 1367 aa15.28■□□□□ 0.04
CCDC144A-203ENST00000360495 NDUFAB1O14561 156 aa15.27■□□□□ 0.04
CCDC144A-203ENST00000360495 MKNK2Q9HBH9 465 aa15.27■□□□□ 0.04
CCDC144A-203ENST00000360495 ACTN2P35609 894 aa15.27■□□□□ 0.04
CCDC144A-203ENST00000360495 TAF7Q15545 349 aaPredicted RBP15.27■□□□□ 0.04
CCDC144A-203ENST00000360495 CATIPQ7Z7H3 387 aa15.27■□□□□ 0.04
CCDC144A-203ENST00000360495 ZSCAN29Q8IWY8 852 aaPredicted RBP15.27■□□□□ 0.04
CCDC144A-203ENST00000360495 BRF1Q92994 677 aa15.27■□□□□ 0.04
CCDC144A-203ENST00000360495 FEZ2Q9UHY8 353 aaPredicted RBP15.27■□□□□ 0.04
CCDC144A-203ENST00000360495 KRT13P13646 458 aa15.27■□□□□ 0.04
CCDC144A-203ENST00000360495 APBB1IPQ7Z5R6 666 aaPredicted RBP15.27■□□□□ 0.04
CCDC144A-203ENST00000360495 LMNTD2Q8IXW0 634 aa15.27■□□□□ 0.04
CCDC144A-203ENST00000360495 RTL1A6NKG5 1358 aa15.27■□□□□ 0.03
CCDC144A-203ENST00000360495 PCK1P35558 622 aa15.27■□□□□ 0.03
CCDC144A-203ENST00000360495 SLC26A6Q9BXS9 759 aa15.27■□□□□ 0.03
CCDC144A-203ENST00000360495 GRIPAP1Q4V328 841 aa15.27■□□□□ 0.03
CCDC144A-203ENST00000360495 TLDC2A0PJX2 215 aa15.26■□□□□ 0.03
CCDC144A-203ENST00000360495 TMEM67Q5HYA8 995 aa15.26■□□□□ 0.03
CCDC144A-203ENST00000360495 UTP14AQ9BVJ6 771 aaKnown RBP15.26■□□□□ 0.03
CCDC144A-203ENST00000360495 RPGRIP1LQ68CZ1 1315 aa15.26■□□□□ 0.03
CCDC144A-203ENST00000360495 BUB1BO60566 1050 aaPredicted RBP15.26■□□□□ 0.03
CCDC144A-203ENST00000360495 ATF3P18847 181 aa15.26■□□□□ 0.03
CCDC144A-203ENST00000360495 IGHMBP2P38935 993 aaKnown RBP15.26■□□□□ 0.03
CCDC144A-203ENST00000360495 ELF2Q15723 593 aa15.26■□□□□ 0.03
CCDC144A-203ENST00000360495 RBM5P52756 815 aaKnown RBP eCLIP15.26■□□□□ 0.03
CCDC144A-203ENST00000360495 ATP11AP98196 1134 aa15.26■□□□□ 0.03
CCDC144A-203ENST00000360495 SREK1Q8WXA9 508 aaKnown RBP15.26■□□□□ 0.03
CCDC144A-203ENST00000360495 CCDC172P0C7W6 258 aa15.25■□□□□ 0.03
CCDC144A-203ENST00000360495 MAP3K12Q12852 859 aa15.25■□□□□ 0.03
CCDC144A-203ENST00000360495 PTPRCP08575 1304 aa15.25■□□□□ 0.03
CCDC144A-203ENST00000360495 GAPVD1Q14C86 1478 aa15.25■□□□□ 0.03
CCDC144A-203ENST00000360495 FAM160A1Q05DH4 1040 aa15.25■□□□□ 0.03
CCDC144A-203ENST00000360495 MAP2K2P36507 400 aa15.25■□□□□ 0.03
CCDC144A-203ENST00000360495 TXNDC2Q86VQ3 553 aa15.25■□□□□ 0.03
CCDC144A-203ENST00000360495 LUC7L2Q9Y383 392 aaKnown RBP15.25■□□□□ 0.03
CCDC144A-203ENST00000360495 STRN4Q9NRL3 753 aa15.25■□□□□ 0.03
CCDC144A-203ENST00000360495 PCDHB15Q9Y5E8 787 aa15.25■□□□□ 0.03
CCDC144A-203ENST00000360495 ATAD2Q6PL18 1390 aa15.25■□□□□ 0.03
CCDC144A-203ENST00000360495 ARID4AP29374 1257 aaPredicted RBP15.24■□□□□ 0.03
CCDC144A-203ENST00000360495 MAP3K9P80192 1104 aa15.24■□□□□ 0.03
CCDC144A-203ENST00000360495 STMN2Q93045 179 aa15.24■□□□□ 0.03
CCDC144A-203ENST00000360495 IFT74Q96LB3 600 aa15.24■□□□□ 0.03
CCDC144A-203ENST00000360495 CCDC42Q96M95 316 aa15.24■□□□□ 0.03
CCDC144A-203ENST00000360495 PRPHP41219 470 aa15.24■□□□□ 0.03
CCDC144A-203ENST00000360495 HAND2P61296 217 aa15.24■□□□□ 0.03
CCDC144A-203ENST00000360495 ESCO1Q5FWF5 840 aa15.24■□□□□ 0.03
CCDC144A-203ENST00000360495 ESYT1Q9BSJ8 1104 aa15.24■□□□□ 0.03
CCDC144A-203ENST00000360495 KCNK9Q9NPC2 374 aa15.24■□□□□ 0.03
CCDC144A-203ENST00000360495 COMMD10Q9Y6G5 202 aa15.24■□□□□ 0.03
CCDC144A-203ENST00000360495 MARCKSP29966 332 aaPredicted RBP15.24■□□□□ 0.03
CCDC144A-203ENST00000360495 NCOA7Q8NI08 942 aa15.24■□□□□ 0.03
CCDC144A-203ENST00000360495 MYD88Q99836 296 aa15.24■□□□□ 0.03
CCDC144A-203ENST00000360495 ANAPC4Q9UJX5 808 aa15.24■□□□□ 0.03
CCDC144A-203ENST00000360495 INTS8Q75QN2 995 aaKnown RBP15.24■□□□□ 0.03
CCDC144A-203ENST00000360495 CCDC50Q8IVM0 306 aa15.24■□□□□ 0.03
CCDC144A-203ENST00000360495 TCEANC2Q96MN5 208 aa15.24■□□□□ 0.03
CCDC144A-203ENST00000360495 PAXIP1Q6ZW49 1069 aaPredicted RBP15.23■□□□□ 0.03
CCDC144A-203ENST00000360495 ZGPATQ8N5A5 531 aaKnown RBP15.23■□□□□ 0.03
CCDC144A-203ENST00000360495 SEC62Q99442 399 aaKnown RBP15.23■□□□□ 0.03
CCDC144A-203ENST00000360495 PPP1R12CQ9BZL4 782 aa15.23■□□□□ 0.03
CCDC144A-203ENST00000360495 DNAI2Q9GZS0 605 aa15.23■□□□□ 0.03
CCDC144A-203ENST00000360495 FGD5Q6ZNL6 1462 aa15.23■□□□□ 0.03
CCDC144A-203ENST00000360495 ARAP1Q96P48 1450 aa15.23■□□□□ 0.03
CCDC144A-203ENST00000360495 TBC1D5Q92609 795 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms