RNA–Protein interactions for RNA: ENST00000360238.6

CUEDC1-201, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CUEDC1, Length 2,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-201ENST00000360238 GJB2P29033 226 aa31.53■■■□□ 2.64
CUEDC1-201ENST00000360238 FOXO4P98177 505 aa31.53■■■□□ 2.64
CUEDC1-201ENST00000360238 ANKRD1Q15327 319 aa31.53■■■□□ 2.64
CUEDC1-201ENST00000360238 CARD10Q9BWT7 1032 aa31.53■■■□□ 2.64
CUEDC1-201ENST00000360238 CWC25Q9NXE8 425 aaPredicted RBP31.53■■■□□ 2.64
CUEDC1-201ENST00000360238 IL2RBP14784 551 aa31.53■■■□□ 2.64
CUEDC1-201ENST00000360238 LMBR1LQ6UX01 489 aa31.53■■■□□ 2.64
CUEDC1-201ENST00000360238 ZNF589Q86UQ0 364 aaPredicted RBP31.53■■■□□ 2.64
CUEDC1-201ENST00000360238 STRCQ7RTU9 1775 aa31.52■■■□□ 2.64
CUEDC1-201ENST00000360238 PDIA4P13667 645 aaKnown RBP31.52■■■□□ 2.64
CUEDC1-201ENST00000360238 ME3Q16798 604 aa31.52■■■□□ 2.64
CUEDC1-201ENST00000360238 GDPD2Q9HCC8 539 aa31.52■■■□□ 2.64
CUEDC1-201ENST00000360238 TAF5LO75529 589 aa31.51■■■□□ 2.64
CUEDC1-201ENST00000360238 ST3GAL1Q11201 340 aa31.51■■■□□ 2.64
CUEDC1-201ENST00000360238 FOXD4L6Q3SYB3 417 aaPredicted RBP31.51■■■□□ 2.64
CUEDC1-201ENST00000360238 USPL1Q5W0Q7 1092 aa31.51■■■□□ 2.64
CUEDC1-201ENST00000360238 BLOC1S2Q6QNY1 142 aa31.51■■■□□ 2.64
CUEDC1-201ENST00000360238 FOXD4L3Q6VB84 417 aaPredicted RBP31.51■■■□□ 2.64
CUEDC1-201ENST00000360238 HAUS7Q99871 368 aa31.51■■■□□ 2.64
CUEDC1-201ENST00000360238 TOGARAM1Q9Y4F4 1720 aa31.51■■■□□ 2.63
CUEDC1-201ENST00000360238 GADD45BO75293 160 aaPredicted RBP31.5■■■□□ 2.63
CUEDC1-201ENST00000360238 PDLIM2Q96JY6 352 aa31.5■■■□□ 2.63
CUEDC1-201ENST00000360238 DBNDD2Q9BQY9 259 aa31.5■■■□□ 2.63
CUEDC1-201ENST00000360238 TTLL7Q6ZT98 887 aa31.5■■■□□ 2.63
CUEDC1-201ENST00000360238 EDC3Q96F86 508 aaKnown RBP31.5■■■□□ 2.63
CUEDC1-201ENST00000360238 TPCN1Q9ULQ1 816 aa31.5■■■□□ 2.63
CUEDC1-201ENST00000360238 RPS6KB1P23443 525 aa31.49■■■□□ 2.63
CUEDC1-201ENST00000360238 CNPY2Q9Y2B0 182 aa31.49■■■□□ 2.63
CUEDC1-201ENST00000360238 GPR108Q9NPR9 543 aa31.49■■■□□ 2.63
CUEDC1-201ENST00000360238 MTMR6Q9Y217 621 aa31.49■■■□□ 2.63
CUEDC1-201ENST00000360238 ZNF609O15014 1411 aa31.48■■■□□ 2.63
CUEDC1-201ENST00000360238 KRT32Q14532 448 aa31.48■■■□□ 2.63
CUEDC1-201ENST00000360238 CCDC191Q8NCU4 936 aa31.48■■■□□ 2.63
CUEDC1-201ENST00000360238 SPEF2Q9C093 1822 aa31.47■■■□□ 2.63
CUEDC1-201ENST00000360238 CSPP1Q1MSJ5 1256 aa31.47■■■□□ 2.63
CUEDC1-201ENST00000360238 HS1BP3Q53T59 392 aa31.47■■■□□ 2.63
CUEDC1-201ENST00000360238 TICAM2Q86XR7 235 aa31.47■■■□□ 2.63
CUEDC1-201ENST00000360238 SLAIN2Q9P270 581 aa31.47■■■□□ 2.63
CUEDC1-201ENST00000360238 UBE2HP62256 183 aa31.46■■■□□ 2.63
CUEDC1-201ENST00000360238 DDX54Q8TDD1 881 aaKnown RBP31.46■■■□□ 2.63
CUEDC1-201ENST00000360238 TSPY26PQ9H489 355 aa31.46■■■□□ 2.63
CUEDC1-201ENST00000360238 PALLDQ8WX93 1383 aa31.46■■■□□ 2.63
CUEDC1-201ENST00000360238 NHSL1Q5SYE7 1610 aa31.45■■■□□ 2.63
CUEDC1-201ENST00000360238 A1BGP04217 495 aa31.45■■■□□ 2.63
CUEDC1-201ENST00000360238 ATG9AQ7Z3C6 839 aa31.45■■■□□ 2.63
CUEDC1-201ENST00000360238 DNAJC2Q99543 621 aaKnown RBP31.45■■■□□ 2.63
CUEDC1-201ENST00000360238 CHMP3Q9Y3E7 222 aa31.44■■■□□ 2.62
CUEDC1-201ENST00000360238 IL15P40933 162 aaPredicted RBP31.44■■■□□ 2.62
CUEDC1-201ENST00000360238 U3KPZ7 1027 aaPredicted RBP31.44■■■□□ 2.62
CUEDC1-201ENST00000360238 SH3TC1Q8TE82 1336 aa31.44■■■□□ 2.62
CUEDC1-201ENST00000360238 NECAB1Q8N987 351 aa31.43■■■□□ 2.62
CUEDC1-201ENST00000360238 KBTBD3Q8NAB2 608 aa31.43■■■□□ 2.62
CUEDC1-201ENST00000360238 MCMDC2Q4G0Z9 681 aa31.43■■■□□ 2.62
CUEDC1-201ENST00000360238 ZSCAN30Q86W11 494 aa31.43■■■□□ 2.62
CUEDC1-201ENST00000360238 ATG3Q9NT62 314 aa31.43■■■□□ 2.62
CUEDC1-201ENST00000360238 CCDC183Q5T5S1 534 aa31.42■■■□□ 2.62
CUEDC1-201ENST00000360238 KLHL34Q8N239 644 aa31.42■■■□□ 2.62
CUEDC1-201ENST00000360238 TAF6LQ9Y6J9 622 aa31.42■■■□□ 2.62
CUEDC1-201ENST00000360238 PDCP20941 246 aa31.41■■■□□ 2.62
CUEDC1-201ENST00000360238 TOB2Q14106 344 aaPredicted RBP31.41■■■□□ 2.62
CUEDC1-201ENST00000360238 ZBTB3Q9H5J0 574 aa31.41■■■□□ 2.62
CUEDC1-201ENST00000360238 CIAO1O76071 339 aa31.4■■■□□ 2.62
CUEDC1-201ENST00000360238 COL9A3Q14050 684 aaPredicted RBP31.4■■■□□ 2.62
CUEDC1-201ENST00000360238 LETM1O95202 739 aaPredicted RBP31.4■■■□□ 2.62
CUEDC1-201ENST00000360238 NDUFB9Q9Y6M9 179 aa31.4■■■□□ 2.62
CUEDC1-201ENST00000360238 LAMA4Q16363 1823 aa31.39■■■□□ 2.62
CUEDC1-201ENST00000360238 EYA2O00167 538 aa31.39■■■□□ 2.61
CUEDC1-201ENST00000360238 FIBPO43427 364 aa31.39■■■□□ 2.61
CUEDC1-201ENST00000360238 DDX46Q7L014 1031 aaKnown RBP31.39■■■□□ 2.61
CUEDC1-201ENST00000360238 VPS37CA5D8V6 355 aaPredicted RBP31.38■■■□□ 2.61
CUEDC1-201ENST00000360238 LARP1BQ659C4 914 aaKnown RBP31.37■■■□□ 2.61
CUEDC1-201ENST00000360238 ISCA1Q9BUE6 129 aa31.37■■■□□ 2.61
CUEDC1-201ENST00000360238 DNM1Q05193 864 aaKnown RBP31.36■■■□□ 2.61
CUEDC1-201ENST00000360238 FAM184AQ8NB25 1140 aa31.36■■■□□ 2.61
CUEDC1-201ENST00000360238 TCEANC2Q96MN5 208 aa31.36■■■□□ 2.61
CUEDC1-201ENST00000360238 NEK1Q96PY6 1258 aa31.36■■■□□ 2.61
CUEDC1-201ENST00000360238 STRN4Q9NRL3 753 aa31.36■■■□□ 2.61
CUEDC1-201ENST00000360238 PAG1Q9NWQ8 432 aa31.36■■■□□ 2.61
CUEDC1-201ENST00000360238 NEUROD6Q96NK8 337 aa31.36■■■□□ 2.61
CUEDC1-201ENST00000360238 HELLSQ9NRZ9 838 aa31.36■■■□□ 2.61
CUEDC1-201ENST00000360238 CCDC129Q6ZRS4 1044 aa31.35■■■□□ 2.61
CUEDC1-201ENST00000360238 TMOD3Q9NYL9 352 aa31.35■■■□□ 2.61
CUEDC1-201ENST00000360238 EVA1CP58658 441 aa31.34■■■□□ 2.61
CUEDC1-201ENST00000360238 SEC62Q99442 399 aaKnown RBP31.34■■■□□ 2.61
CUEDC1-201ENST00000360238 ITGB4P16144 1822 aa31.34■■■□□ 2.61
CUEDC1-201ENST00000360238 ANO8Q9HCE9 1232 aaPredicted RBP31.34■■■□□ 2.61
CUEDC1-201ENST00000360238 ZBTB4Q9P1Z0 1013 aaPredicted RBP31.34■■■□□ 2.61
CUEDC1-201ENST00000360238 VSIG10Q8N0Z9 540 aa31.33■■■□□ 2.61
CUEDC1-201ENST00000360238 RNF214Q8ND24 703 aa31.33■■■□□ 2.61
CUEDC1-201ENST00000360238 PPIL4Q8WUA2 492 aaKnown RBP eCLIP31.33■■■□□ 2.61
CUEDC1-201ENST00000360238 TEX13AQ9BXU3 409 aaPredicted RBP31.33■■■□□ 2.61
CUEDC1-201ENST00000360238 FBXO3Q9UK99 471 aa31.33■■■□□ 2.61
CUEDC1-201ENST00000360238 ZNF335Q9H4Z2 1342 aaPredicted RBP31.32■■■□□ 2.6
CUEDC1-201ENST00000360238 GOLIM4O00461 696 aa31.32■■■□□ 2.6
CUEDC1-201ENST00000360238 CYP21A2P08686 494 aa31.32■■■□□ 2.6
CUEDC1-201ENST00000360238 TRIM28Q13263 835 aaKnown RBP31.32■■■□□ 2.6
CUEDC1-201ENST00000360238 TCIRG1Q13488 830 aa31.32■■■□□ 2.6
CUEDC1-201ENST00000360238 MSNP26038 577 aaKnown RBP31.32■■■□□ 2.6
CUEDC1-201ENST00000360238 LRRC24Q50LG9 513 aa31.32■■■□□ 2.6
CUEDC1-201ENST00000360238 DSCC1Q9BVC3 393 aa31.32■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms