RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 AOPEPQ8N6M6 819 aa15.83■□□□□ 0.12
VCP-201ENST00000358901 ZMYND15Q9H091 742 aa15.83■□□□□ 0.12
VCP-201ENST00000358901 SEC63Q9UGP8 760 aaKnown RBP15.83■□□□□ 0.12
VCP-201ENST00000358901 WDR62O43379 1518 aa15.83■□□□□ 0.12
VCP-201ENST00000358901 MARCKSP29966 332 aaPredicted RBP15.83■□□□□ 0.12
VCP-201ENST00000358901 CCDC150Q8NCX0 1101 aa15.83■□□□□ 0.12
VCP-201ENST00000358901 KCNG4Q8TDN1 519 aa15.83■□□□□ 0.12
VCP-201ENST00000358901 LRRC59Q96AG4 307 aaKnown RBP15.83■□□□□ 0.12
VCP-201ENST00000358901 ALG1Q9BT22 464 aa15.83■□□□□ 0.12
VCP-201ENST00000358901 NPATQ14207 1427 aa15.83■□□□□ 0.12
VCP-201ENST00000358901 CHST3Q7LGC8 479 aa15.82■□□□□ 0.12
VCP-201ENST00000358901 YEATS4O95619 227 aa15.82■□□□□ 0.12
VCP-201ENST00000358901 ZNF287Q9HBT7 754 aa15.82■□□□□ 0.12
VCP-201ENST00000358901 ZMYM4Q5VZL5 1548 aa15.82■□□□□ 0.12
VCP-201ENST00000358901 NEFHP12036 1026 aa15.82■□□□□ 0.12
VCP-201ENST00000358901 ZNF444Q8N0Y2 327 aaPredicted RBP15.82■□□□□ 0.12
VCP-201ENST00000358901 ZBTB43O43298 467 aa15.82■□□□□ 0.12
VCP-201ENST00000358901 LMOD1P29536 600 aaPredicted RBP15.82■□□□□ 0.12
VCP-201ENST00000358901 ZNF76P36508 570 aa15.82■□□□□ 0.12
VCP-201ENST00000358901 AKAP4Q5JQC9 854 aa15.82■□□□□ 0.12
VCP-201ENST00000358901 FLT4P35916 1363 aa15.81■□□□□ 0.12
VCP-201ENST00000358901 MSH6P52701 1360 aa15.81■□□□□ 0.12
VCP-201ENST00000358901 CCDC171Q6TFL3 1326 aa15.81■□□□□ 0.12
VCP-201ENST00000358901 GTF2F1P35269 517 aaKnown RBP eCLIP15.81■□□□□ 0.12
VCP-201ENST00000358901 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.81■□□□□ 0.124e-6■■■□□ 16
VCP-201ENST00000358901 DNAI1Q9UI46 699 aa15.81■□□□□ 0.12
VCP-201ENST00000358901 V9GYY5 206 aaPredicted RBP15.81■□□□□ 0.12
VCP-201ENST00000358901 EIF2AK4Q9P2K8 1649 aaKnown RBP15.81■□□□□ 0.12
VCP-201ENST00000358901 MAP3K19Q56UN5 1328 aa15.81■□□□□ 0.12
VCP-201ENST00000358901 PTGS1P23219 599 aa15.81■□□□□ 0.12
VCP-201ENST00000358901 UBA7P41226 1012 aa15.81■□□□□ 0.12
VCP-201ENST00000358901 TMEM132AQ24JP5 1023 aa15.81■□□□□ 0.12
VCP-201ENST00000358901 CCDC12Q8WUD4 166 aaPredicted RBP15.81■□□□□ 0.12
VCP-201ENST00000358901 ZFYP08048 801 aaPredicted RBP15.81■□□□□ 0.12
VCP-201ENST00000358901 MAP9Q49MG5 647 aa15.81■□□□□ 0.12
VCP-201ENST00000358901 FBXO3Q9UK99 471 aa15.81■□□□□ 0.12
VCP-201ENST00000358901 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.81■□□□□ 0.12
VCP-201ENST00000358901 IDEP14735 1019 aa15.8■□□□□ 0.12
VCP-201ENST00000358901 GOLGA6L9A6NEM1 432 aa15.8■□□□□ 0.12
VCP-201ENST00000358901 N4BP3O15049 544 aa15.8■□□□□ 0.12
VCP-201ENST00000358901 BMS1Q14692 1282 aaKnown RBP15.8■□□□□ 0.12
VCP-201ENST00000358901 TDRD12Q587J7 1177 aaKnown RBP15.8■□□□□ 0.12
VCP-201ENST00000358901 MTIF2P46199 727 aaKnown RBP15.8■□□□□ 0.12
VCP-201ENST00000358901 ATP2B3Q16720 1220 aa15.8■□□□□ 0.12
VCP-201ENST00000358901 LUZP1Q86V48 1076 aa15.8■□□□□ 0.12
VCP-201ENST00000358901 PAFAH1B1P43034 410 aa15.8■□□□□ 0.12
VCP-201ENST00000358901 SHANK2Q9UPX8 1470 aa15.79■□□□□ 0.12
VCP-201ENST00000358901 SPATA31E1Q6ZUB1 1445 aa15.79■□□□□ 0.12
VCP-201ENST00000358901 DTNBO60941 627 aa15.79■□□□□ 0.12
VCP-201ENST00000358901 IL15P40933 162 aaPredicted RBP15.79■□□□□ 0.12
VCP-201ENST00000358901 TNRQ92752 1358 aa15.79■□□□□ 0.12
VCP-201ENST00000358901 APOBRQ0VD83 1088 aa15.79■□□□□ 0.12
VCP-201ENST00000358901 KANK3Q6NY19 840 aa15.79■□□□□ 0.12
VCP-201ENST00000358901 FAM173BQ6P4H8 233 aa15.79■□□□□ 0.12
VCP-201ENST00000358901 ANKIB1Q9P2G1 1089 aa15.79■□□□□ 0.12
VCP-201ENST00000358901 MPHOSPH10O00566 681 aaKnown RBP15.78■□□□□ 0.12
VCP-201ENST00000358901 SPTLC2O15270 562 aa15.78■□□□□ 0.12
VCP-201ENST00000358901 IL13P35225 146 aa15.78■□□□□ 0.12
VCP-201ENST00000358901 SLC9C2Q5TAH2 1124 aa15.78■□□□□ 0.12
VCP-201ENST00000358901 RUFY3Q7L099 469 aa15.78■□□□□ 0.12
VCP-201ENST00000358901 TSPY2A6NKD2 308 aa15.78■□□□□ 0.12
VCP-201ENST00000358901 USO1O60763 962 aaKnown RBP15.78■□□□□ 0.12
VCP-201ENST00000358901 AFMP43652 599 aa15.78■□□□□ 0.12
VCP-201ENST00000358901 WTAPQ15007 396 aa15.78■□□□□ 0.12
VCP-201ENST00000358901 PAG1Q9NWQ8 432 aa15.78■□□□□ 0.12
VCP-201ENST00000358901 BLMP54132 1417 aaPredicted RBP15.78■□□□□ 0.12
VCP-201ENST00000358901 ZFYVE9O95405 1425 aa15.78■□□□□ 0.12
VCP-201ENST00000358901 PRC1O43663 620 aa15.78■□□□□ 0.12
VCP-201ENST00000358901 DHX37Q8IY37 1157 aaKnown RBP15.78■□□□□ 0.12
VCP-201ENST00000358901 NFATC2IPQ8NCF5 419 aa15.78■□□□□ 0.12
VCP-201ENST00000358901 CHL1O00533 1208 aa15.78■□□□□ 0.12
VCP-201ENST00000358901 TEX13AQ9BXU3 409 aaPredicted RBP15.78■□□□□ 0.12
VCP-201ENST00000358901 RAB34Q9BZG1 259 aa15.78■□□□□ 0.12
VCP-201ENST00000358901 UBA5Q9GZZ9 404 aa15.78■□□□□ 0.12
VCP-201ENST00000358901 TCP11L1Q9NUJ3 509 aa15.78■□□□□ 0.12
VCP-201ENST00000358901 IQSEC3Q9UPP2 1182 aaPredicted RBP15.78■□□□□ 0.12
VCP-201ENST00000358901 UHRF1BP1LA0JNW5 1464 aa15.77■□□□□ 0.12
VCP-201ENST00000358901 RIMS2Q9UQ26 1411 aa15.77■□□□□ 0.12
VCP-201ENST00000358901 CTTNBP2Q8WZ74 1663 aa15.77■□□□□ 0.12
VCP-201ENST00000358901 CALCOCO1Q9P1Z2 691 aa15.77■□□□□ 0.12
VCP-201ENST00000358901 ASXL2Q76L83 1435 aa15.77■□□□□ 0.12
VCP-201ENST00000358901 PTPDC1A2A3K4 754 aa15.77■□□□□ 0.11
VCP-201ENST00000358901 RNF216Q9NWF9 866 aaPredicted RBP15.77■□□□□ 0.11
VCP-201ENST00000358901 UNC13AQ9UPW8 1703 aa15.77■□□□□ 0.11
VCP-201ENST00000358901 KIAA0556O60303 1618 aa15.76■□□□□ 0.11
VCP-201ENST00000358901 SLC4A8Q2Y0W8 1093 aa15.76■□□□□ 0.11
VCP-201ENST00000358901 DHX32Q7L7V1 743 aaKnown RBP15.76■□□□□ 0.11
VCP-201ENST00000358901 KRT222Q8N1A0 295 aa15.76■□□□□ 0.11
VCP-201ENST00000358901 TSG101Q99816 390 aa15.76■□□□□ 0.11
VCP-201ENST00000358901 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.76■□□□□ 0.114e-7■■■□□ 16.1
VCP-201ENST00000358901 EXOC5O00471 708 aa15.76■□□□□ 0.11
VCP-201ENST00000358901 ZPR1O75312 459 aa15.76■□□□□ 0.11
VCP-201ENST00000358901 UQCRFS1P1P0C7P4 283 aa15.76■□□□□ 0.11
VCP-201ENST00000358901 VAT1LQ9HCJ6 419 aa15.76■□□□□ 0.11
VCP-201ENST00000358901 DNMT1P26358 1616 aaKnown RBP15.76■□□□□ 0.11
VCP-201ENST00000358901 PNMA6EA0A0J9YXQ4 647 aa15.75■□□□□ 0.11
VCP-201ENST00000358901 PPP1R12BO60237 982 aaPredicted RBP15.75■□□□□ 0.11
VCP-201ENST00000358901 KAT6BQ8WYB5 2073 aa15.75■□□□□ 0.11
VCP-201ENST00000358901 INSRP06213 1382 aa15.75■□□□□ 0.11
VCP-201ENST00000358901 TFCP2Q12800 502 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms