RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 SETD1BQ9UPS6 1966 aaKnown RBP14.36□□□□□ -0.11
COL20A1-201ENST00000358894 POLR3DP05423 398 aaPredicted RBP14.36□□□□□ -0.11
COL20A1-201ENST00000358894 LDHAL6AQ6ZMR3 332 aa14.36□□□□□ -0.11
COL20A1-201ENST00000358894 PDILTQ8N807 584 aa14.36□□□□□ -0.11
COL20A1-201ENST00000358894 DDX19AQ9NUU7 478 aaKnown RBP14.36□□□□□ -0.11
COL20A1-201ENST00000358894 CPSF1Q10570 1443 aaKnown RBP14.35□□□□□ -0.11
COL20A1-201ENST00000358894 GOLGA8BA8MQT2 603 aa14.35□□□□□ -0.11
COL20A1-201ENST00000358894 OLFM4Q6UX06 510 aa14.35□□□□□ -0.11
COL20A1-201ENST00000358894 C19orf44Q9H6X5 657 aa14.35□□□□□ -0.11
COL20A1-201ENST00000358894 NLRP1Q9C000 1473 aa14.35□□□□□ -0.11
COL20A1-201ENST00000358894 PIK3C2BO00750 1634 aa14.35□□□□□ -0.11
COL20A1-201ENST00000358894 DEPDC5O75140 1603 aa14.35□□□□□ -0.11
COL20A1-201ENST00000358894 HSP90AB3PQ58FF7 597 aa14.35□□□□□ -0.11
COL20A1-201ENST00000358894 AIDAQ96BJ3 306 aa14.35□□□□□ -0.11
COL20A1-201ENST00000358894 STAP2Q9UGK3 403 aa14.35□□□□□ -0.11
COL20A1-201ENST00000358894 HOOK1Q9UJC3 728 aaKnown RBP14.35□□□□□ -0.11
COL20A1-201ENST00000358894 FSIP1Q8NA03 581 aa14.35□□□□□ -0.11
COL20A1-201ENST00000358894 ZC3H13Q5T200 1668 aaKnown RBP14.35□□□□□ -0.11
COL20A1-201ENST00000358894 SLC27A2O14975 620 aa14.34□□□□□ -0.11
COL20A1-201ENST00000358894 TRMT112Q9UI30 125 aaKnown RBP14.34□□□□□ -0.11
COL20A1-201ENST00000358894 ZNF213O14771 459 aa14.34□□□□□ -0.11
COL20A1-201ENST00000358894 TDO2P48775 406 aa14.34□□□□□ -0.11
COL20A1-201ENST00000358894 CADPS2Q86UW7 1296 aa14.34□□□□□ -0.11
COL20A1-201ENST00000358894 UVSSAQ2YD98 709 aa14.34□□□□□ -0.11
COL20A1-201ENST00000358894 TAF3Q5VWG9 929 aa14.34□□□□□ -0.11
COL20A1-201ENST00000358894 ZSCAN25Q6NSZ9 544 aa14.34□□□□□ -0.11
COL20A1-201ENST00000358894 ZCRB1Q8TBF4 217 aaKnown RBP14.34□□□□□ -0.11
COL20A1-201ENST00000358894 MCM5P33992 734 aa14.34□□□□□ -0.11
COL20A1-201ENST00000358894 GCKRQ14397 625 aa14.34□□□□□ -0.11
COL20A1-201ENST00000358894 PPP4R3BQ5MIZ7 849 aa14.34□□□□□ -0.11
COL20A1-201ENST00000358894 CCDC144CPQ8IYA2 1237 aa14.34□□□□□ -0.11
COL20A1-201ENST00000358894 ABCF2Q9UG63 623 aa14.34□□□□□ -0.11
COL20A1-201ENST00000358894 USP16Q9Y5T5 823 aa14.34□□□□□ -0.11
COL20A1-201ENST00000358894 BIN1O00499 593 aa14.33□□□□□ -0.12
COL20A1-201ENST00000358894 ANO6Q4KMQ2 910 aa14.33□□□□□ -0.12
COL20A1-201ENST00000358894 JMYQ8N9B5 988 aa14.33□□□□□ -0.12
COL20A1-201ENST00000358894 DCAF5Q96JK2 942 aa14.33□□□□□ -0.12
COL20A1-201ENST00000358894 MYOM1P52179 1685 aa14.33□□□□□ -0.12
COL20A1-201ENST00000358894 CCDC69A6NI79 296 aa14.33□□□□□ -0.12
COL20A1-201ENST00000358894 MYO3AQ8NEV4 1616 aa14.33□□□□□ -0.12
COL20A1-201ENST00000358894 METTL22Q9BUU2 404 aaPredicted RBP14.33□□□□□ -0.12
COL20A1-201ENST00000358894 PAG1Q9NWQ8 432 aa14.33□□□□□ -0.12
COL20A1-201ENST00000358894 CPS1P31327 1500 aa14.33□□□□□ -0.12
COL20A1-201ENST00000358894 SERPINC1P01008 464 aa14.33□□□□□ -0.12
COL20A1-201ENST00000358894 APOBRQ0VD83 1088 aa14.33□□□□□ -0.12
COL20A1-201ENST00000358894 ADCK5Q3MIX3 580 aa14.33□□□□□ -0.12
COL20A1-201ENST00000358894 C16orf45Q96MC5 204 aaPredicted RBP14.33□□□□□ -0.12
COL20A1-201ENST00000358894 CLIP2Q9UDT6 1046 aa14.33□□□□□ -0.12
COL20A1-201ENST00000358894 CCAR1Q8IX12 1150 aaKnown RBP14.32□□□□□ -0.12
COL20A1-201ENST00000358894 ORC3Q9UBD5 711 aaPredicted RBP14.32□□□□□ -0.12
COL20A1-201ENST00000358894 NPHP3Q7Z494 1330 aa14.32□□□□□ -0.12
COL20A1-201ENST00000358894 TNNI3KQ59H18 835 aa14.32□□□□□ -0.12
COL20A1-201ENST00000358894 CCDC112Q8NEF3 446 aa14.32□□□□□ -0.12
COL20A1-201ENST00000358894 SLC52A2Q9HAB3 445 aa14.32□□□□□ -0.12
COL20A1-201ENST00000358894 FPGT-TNNI3KV9GXZ4 949 aa14.32□□□□□ -0.12
COL20A1-201ENST00000358894 MROH1Q8NDA8 1641 aa14.32□□□□□ -0.12
COL20A1-201ENST00000358894 A0A0D9SFI3 127 aa14.32□□□□□ -0.12
COL20A1-201ENST00000358894 DYNC1I1O14576 645 aa14.32□□□□□ -0.12
COL20A1-201ENST00000358894 TRIM22Q8IYM9 498 aa14.32□□□□□ -0.12
COL20A1-201ENST00000358894 NACAP1Q9BZK3 213 aa14.32□□□□□ -0.12
COL20A1-201ENST00000358894 DNAJC25Q9H1X3 360 aa14.32□□□□□ -0.12
COL20A1-201ENST00000358894 LRP2BPQ9P2M1 347 aa14.32□□□□□ -0.12
COL20A1-201ENST00000358894 NSFL1CQ9UNZ2 370 aaKnown RBP14.32□□□□□ -0.12
COL20A1-201ENST00000358894 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.32□□□□□ -0.12
COL20A1-201ENST00000358894 ME3Q16798 604 aa14.31□□□□□ -0.12
COL20A1-201ENST00000358894 SKIDA1Q1XH10 827 aa14.31□□□□□ -0.12
COL20A1-201ENST00000358894 OFD1O75665 1012 aa14.31□□□□□ -0.12
COL20A1-201ENST00000358894 IL15P40933 162 aaPredicted RBP14.31□□□□□ -0.12
COL20A1-201ENST00000358894 ISM2Q6H9L7 571 aa14.31□□□□□ -0.12
COL20A1-201ENST00000358894 MICU3Q86XE3 530 aa14.31□□□□□ -0.12
COL20A1-201ENST00000358894 FAM200AQ8TCP9 573 aa14.31□□□□□ -0.12
COL20A1-201ENST00000358894 ZNF594Q96JF6 807 aaPredicted RBP14.31□□□□□ -0.12
COL20A1-201ENST00000358894 KLF18A0A0U1RQI7 1052 aa14.3□□□□□ -0.12
COL20A1-201ENST00000358894 A1BGP04217 495 aa14.3□□□□□ -0.12
COL20A1-201ENST00000358894 RPS6KB1P23443 525 aa14.3□□□□□ -0.12
COL20A1-201ENST00000358894 TYRO3Q06418 890 aa14.3□□□□□ -0.12
COL20A1-201ENST00000358894 NOLC1Q14978 699 aaKnown RBP eCLIP14.3□□□□□ -0.12
COL20A1-201ENST00000358894 TLR7Q9NYK1 1049 aaKnown RBP14.3□□□□□ -0.12
COL20A1-201ENST00000358894 FRMPD1Q5SYB0 1578 aa14.3□□□□□ -0.12
COL20A1-201ENST00000358894 NEURL1BA8MQ27 555 aa14.3□□□□□ -0.12
COL20A1-201ENST00000358894 CDC37L1Q7L3B6 337 aa14.3□□□□□ -0.12
COL20A1-201ENST00000358894 LUZP1Q86V48 1076 aa14.3□□□□□ -0.12
COL20A1-201ENST00000358894 LSG1Q9H089 658 aaKnown RBP14.3□□□□□ -0.12
COL20A1-201ENST00000358894 NAPBQ9H115 298 aa14.3□□□□□ -0.12
COL20A1-201ENST00000358894 ANO10Q9NW15 660 aa14.3□□□□□ -0.12
COL20A1-201ENST00000358894 NOL7Q9UMY1 257 aaKnown RBP14.3□□□□□ -0.12
COL20A1-201ENST00000358894 TEX35Q5T0J7 233 aa14.3□□□□□ -0.12
COL20A1-201ENST00000358894 SMAP1Q8IYB5 467 aaPredicted RBP14.3□□□□□ -0.12
COL20A1-201ENST00000358894 PPLO60437 1756 aa14.3□□□□□ -0.12
COL20A1-201ENST00000358894 CDKL5O76039 1030 aa14.3□□□□□ -0.12
COL20A1-201ENST00000358894 HS1BP3Q53T59 392 aa14.3□□□□□ -0.12
COL20A1-201ENST00000358894 CCDC186Q7Z3E2 898 aa14.3□□□□□ -0.12
COL20A1-201ENST00000358894 FAM177A1Q8N128 213 aaPredicted RBP14.3□□□□□ -0.12
COL20A1-201ENST00000358894 GOLGA6L1Q8N7Z2 621 aa14.3□□□□□ -0.12
COL20A1-201ENST00000358894 PIBF1Q8WXW3 757 aa14.3□□□□□ -0.12
COL20A1-201ENST00000358894 ANKRD18BA2A2Z9 1011 aa14.29□□□□□ -0.12
COL20A1-201ENST00000358894 JAK2O60674 1132 aa14.29□□□□□ -0.12
COL20A1-201ENST00000358894 XBP1P17861 261 aa14.29□□□□□ -0.12
COL20A1-201ENST00000358894 BICDL1Q6ZP65 573 aa14.29□□□□□ -0.12
COL20A1-201ENST00000358894 C17orf53Q8N3J3 647 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms