RNA–Protein interactions for RNA: ENST00000358173.7

EPHB4-201, Transcript of EPH receptor B4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB4, Length 4,329 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-201ENST00000358173 RBM5P52756 815 aaKnown RBP eCLIP18.47■□□□□ 0.55
EPHB4-201ENST00000358173 IKQ13123 557 aaPredicted RBP18.47■□□□□ 0.55
EPHB4-201ENST00000358173 BRF1Q92994 677 aa18.47■□□□□ 0.55
EPHB4-201ENST00000358173 TFIP11Q9UBB9 837 aaKnown RBP18.47■□□□□ 0.55
EPHB4-201ENST00000358173 GSPT1P15170 499 aaKnown RBP18.46■□□□□ 0.55
EPHB4-201ENST00000358173 MNS1Q8NEH6 495 aa18.46■□□□□ 0.55
EPHB4-201ENST00000358173 SETBP1Q9Y6X0 1596 aa18.46■□□□□ 0.55
EPHB4-201ENST00000358173 TTC41PQ6P2S7 1318 aa18.46■□□□□ 0.55
EPHB4-201ENST00000358173 ARHGEF40Q8TER5 1519 aa18.46■□□□□ 0.55
EPHB4-201ENST00000358173 GJB2P29033 226 aa18.46■□□□□ 0.55
EPHB4-201ENST00000358173 CCDC144CPQ8IYA2 1237 aa18.46■□□□□ 0.55
EPHB4-201ENST00000358173 ZNF396Q96N95 335 aaPredicted RBP18.46■□□□□ 0.55
EPHB4-201ENST00000358173 SH2B1Q9NRF2 756 aaPredicted RBP18.46■□□□□ 0.55
EPHB4-201ENST00000358173 ADCY5O95622 1261 aa18.45■□□□□ 0.54
EPHB4-201ENST00000358173 CCDC152Q4G0S7 254 aa18.45■□□□□ 0.54
EPHB4-201ENST00000358173 BEND3Q5T5X7 828 aa18.45■□□□□ 0.54
EPHB4-201ENST00000358173 CCDC112Q8NEF3 446 aa18.45■□□□□ 0.54
EPHB4-201ENST00000358173 ZNF830Q96NB3 372 aaPredicted RBP18.45■□□□□ 0.54
EPHB4-201ENST00000358173 SIRT2Q8IXJ6 389 aa18.45■□□□□ 0.54
EPHB4-201ENST00000358173 EDC3Q96F86 508 aaKnown RBP18.45■□□□□ 0.54
EPHB4-201ENST00000358173 BRMS1Q9HCU9 246 aa18.45■□□□□ 0.54
EPHB4-201ENST00000358173 PAG1Q9NWQ8 432 aa18.45■□□□□ 0.54
EPHB4-201ENST00000358173 SLC9C2Q5TAH2 1124 aa18.45■□□□□ 0.54
EPHB4-201ENST00000358173 NEURL1BA8MQ27 555 aa18.44■□□□□ 0.54
EPHB4-201ENST00000358173 SF3B2Q13435 895 aaKnown RBP18.44■□□□□ 0.54
EPHB4-201ENST00000358173 GIMAP6Q6P9H5 292 aa18.44■□□□□ 0.54
EPHB4-201ENST00000358173 RANBP6O60518 1105 aaKnown RBP18.44■□□□□ 0.54
EPHB4-201ENST00000358173 CHST3Q7LGC8 479 aa18.44■□□□□ 0.54
EPHB4-201ENST00000358173 CCDC24Q8N4L8 307 aa18.44■□□□□ 0.54
EPHB4-201ENST00000358173 SETDB2Q96T68 719 aa18.44■□□□□ 0.54
EPHB4-201ENST00000358173 C6orf229H3BNL8 230 aa18.44■□□□□ 0.54
EPHB4-201ENST00000358173 TNNT3P45378 269 aaPredicted RBP18.44■□□□□ 0.54
EPHB4-201ENST00000358173 DZIP1Q86YF9 867 aaKnown RBP18.44■□□□□ 0.54
EPHB4-201ENST00000358173 RPGRQ92834 1020 aaKnown RBP18.44■□□□□ 0.54
EPHB4-201ENST00000358173 PDCL3Q9H2J4 239 aa18.44■□□□□ 0.54
EPHB4-201ENST00000358173 CFAP45Q9UL16 551 aa18.43■□□□□ 0.54
EPHB4-201ENST00000358173 CNPY2Q9Y2B0 182 aa18.43■□□□□ 0.54
EPHB4-201ENST00000358173 MCMDC2Q4G0Z9 681 aa18.43■□□□□ 0.54
EPHB4-201ENST00000358173 BRINP3Q76B58 766 aa18.43■□□□□ 0.54
EPHB4-201ENST00000358173 USP48Q86UV5 1035 aa18.43■□□□□ 0.54
EPHB4-201ENST00000358173 PDILTQ8N807 584 aa18.43■□□□□ 0.54
EPHB4-201ENST00000358173 SMARCC1Q92922 1105 aaPredicted RBP18.43■□□□□ 0.54
EPHB4-201ENST00000358173 UTP14AQ9BVJ6 771 aaKnown RBP18.43■□□□□ 0.54
EPHB4-201ENST00000358173 ASAP1Q9ULH1 1129 aa18.43■□□□□ 0.54
EPHB4-201ENST00000358173 GOLGA8BA8MQT2 603 aa18.42■□□□□ 0.54
EPHB4-201ENST00000358173 FAM227BQ96M60 508 aa18.42■□□□□ 0.54
EPHB4-201ENST00000358173 PIK3C2BO00750 1634 aa18.42■□□□□ 0.54
EPHB4-201ENST00000358173 A0A1B0GUL7 405 aa18.42■□□□□ 0.54
EPHB4-201ENST00000358173 TPM1P09493 284 aa18.42■□□□□ 0.54
EPHB4-201ENST00000358173 CCDC129Q6ZRS4 1044 aa18.42■□□□□ 0.54
EPHB4-201ENST00000358173 SCAND2PQ9GZW5 306 aaPredicted RBP18.42■□□□□ 0.54
EPHB4-201ENST00000358173 HOOK1Q9UJC3 728 aaKnown RBP18.42■□□□□ 0.54
EPHB4-201ENST00000358173 ZSCAN29Q8IWY8 852 aaPredicted RBP18.42■□□□□ 0.54
EPHB4-201ENST00000358173 PNPLA6Q8IY17 1366 aa18.42■□□□□ 0.54
EPHB4-201ENST00000358173 USP5P45974 858 aa18.42■□□□□ 0.54
EPHB4-201ENST00000358173 UBE2HP62256 183 aa18.42■□□□□ 0.54
EPHB4-201ENST00000358173 ANKRD18AQ8IVF6 992 aa18.42■□□□□ 0.54
EPHB4-201ENST00000358173 SSH3Q8TE77 659 aa18.42■□□□□ 0.54
EPHB4-201ENST00000358173 MICU3Q86XE3 530 aa18.41■□□□□ 0.54
EPHB4-201ENST00000358173 EYA2O00167 538 aa18.41■□□□□ 0.54
EPHB4-201ENST00000358173 IFIT3O14879 490 aaKnown RBP18.41■□□□□ 0.54
EPHB4-201ENST00000358173 ANAPC15P60006 121 aa18.41■□□□□ 0.54
EPHB4-201ENST00000358173 TNNI3KQ59H18 835 aa18.41■□□□□ 0.54
EPHB4-201ENST00000358173 CCDC191Q8NCU4 936 aa18.41■□□□□ 0.54
EPHB4-201ENST00000358173 NLRP3Q96P20 1036 aa18.41■□□□□ 0.54
EPHB4-201ENST00000358173 JAG2Q9Y219 1238 aa18.41■□□□□ 0.54
EPHB4-201ENST00000358173 FPGT-TNNI3KV9GXZ4 949 aa18.41■□□□□ 0.54
EPHB4-201ENST00000358173 ANTXR1Q9H6X2 564 aa18.41■□□□□ 0.54
EPHB4-201ENST00000358173 ZKSCAN5Q9Y2L8 839 aa18.41■□□□□ 0.54
EPHB4-201ENST00000358173 ZSCAN22P10073 491 aaPredicted RBP18.4■□□□□ 0.54
EPHB4-201ENST00000358173 MCM5P33992 734 aa18.4■□□□□ 0.54
EPHB4-201ENST00000358173 OLFM4Q6UX06 510 aa18.4■□□□□ 0.54
EPHB4-201ENST00000358173 GOLGA6L1Q8N7Z2 621 aa18.4■□□□□ 0.54
EPHB4-201ENST00000358173 AK2P54819 239 aa18.4■□□□□ 0.54
EPHB4-201ENST00000358173 DNAJC5Q9H3Z4 198 aa18.4■□□□□ 0.54
EPHB4-201ENST00000358173 HMGB1P09429 215 aaKnown RBP18.4■□□□□ 0.54
EPHB4-201ENST00000358173 ITGA6P23229 1130 aa18.4■□□□□ 0.54
EPHB4-201ENST00000358173 RBSNQ9H1K0 784 aa18.4■□□□□ 0.54
EPHB4-201ENST00000358173 PRDM10Q9NQV6 1147 aa18.4■□□□□ 0.54
EPHB4-201ENST00000358173 CPSF1Q10570 1443 aaKnown RBP18.4■□□□□ 0.54
EPHB4-201ENST00000358173 ADAMTS13Q76LX8 1427 aa18.4■□□□□ 0.54
EPHB4-201ENST00000358173 ERVV-2B6SEH9 535 aa18.39■□□□□ 0.53
EPHB4-201ENST00000358173 GNPATO15228 680 aa18.39■□□□□ 0.53
EPHB4-201ENST00000358173 TTF1Q15361 905 aaPredicted RBP18.39■□□□□ 0.53
EPHB4-201ENST00000358173 TSR1Q2NL82 804 aaKnown RBP18.39■□□□□ 0.53
EPHB4-201ENST00000358173 CEP57L1Q8IYX8 460 aa18.39■□□□□ 0.53
EPHB4-201ENST00000358173 EAF2Q96CJ1 260 aaPredicted RBP18.39■□□□□ 0.53
EPHB4-201ENST00000358173 BRPF1P55201 1214 aaPredicted RBP18.39■□□□□ 0.53
EPHB4-201ENST00000358173 CREB3L3Q68CJ9 461 aa18.39■□□□□ 0.53
EPHB4-201ENST00000358173 C8orf76Q96K31 380 aa18.39■□□□□ 0.53
EPHB4-201ENST00000358173 CDKL5O76039 1030 aa18.38■□□□□ 0.53
EPHB4-201ENST00000358173 PDCL2Q8N4E4 241 aa18.38■□□□□ 0.53
EPHB4-201ENST00000358173 TTC12Q9H892 705 aaPredicted RBP18.38■□□□□ 0.53
EPHB4-201ENST00000358173 FRMPD1Q5SYB0 1578 aa18.38■□□□□ 0.53
EPHB4-201ENST00000358173 HMG20BQ9P0W2 317 aa18.38■□□□□ 0.53
EPHB4-201ENST00000358173 UBE2Q2Q8WVN8 375 aa18.38■□□□□ 0.53
EPHB4-201ENST00000358173 ARGLU1Q9NWB6 273 aaPredicted RBP18.38■□□□□ 0.53
EPHB4-201ENST00000358173 DIP2BQ9P265 1576 aa18.38■□□□□ 0.53
EPHB4-201ENST00000358173 POLR3DP05423 398 aaPredicted RBP18.37■□□□□ 0.53
EPHB4-201ENST00000358173 MKNK2Q9HBH9 465 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms