RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 FOXD4L4Q8WXT5 416 aaPredicted RBP4.72□□□□□ -1.65
SYNE2-204ENST00000358025 ALS2CR12Q96Q35 445 aa4.72□□□□□ -1.65
SYNE2-204ENST00000358025 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.71□□□□□ -1.65
SYNE2-204ENST00000358025 HSP90AB2PQ58FF8 381 aa4.71□□□□□ -1.65
SYNE2-204ENST00000358025 GIGYF2Q6Y7W6 1299 aaKnown RBP4.71□□□□□ -1.65
SYNE2-204ENST00000358025 BMP2KQ9NSY1 1161 aaPredicted RBP4.71□□□□□ -1.65
SYNE2-204ENST00000358025 USP19O94966 1318 aa4.71□□□□□ -1.65
SYNE2-204ENST00000358025 DISP3Q9P2K9 1392 aa4.71□□□□□ -1.65
SYNE2-204ENST00000358025 GCOM1H8Y6P7 765 aaPredicted RBP4.71□□□□□ -1.65
SYNE2-204ENST00000358025 HSF2BPO75031 334 aa4.71□□□□□ -1.65
SYNE2-204ENST00000358025 MYZAPP0CAP1 466 aa4.71□□□□□ -1.65
SYNE2-204ENST00000358025 FAM71BQ8TC56 605 aa4.71□□□□□ -1.65
SYNE2-204ENST00000358025 ANKRD27Q96NW4 1050 aa4.71□□□□□ -1.65
SYNE2-204ENST00000358025 CCDC178Q5BJE1 867 aa4.71□□□□□ -1.65
SYNE2-204ENST00000358025 LARP1Q6PKG0 1096 aaKnown RBP4.71□□□□□ -1.65
SYNE2-204ENST00000358025 NSD3Q9BZ95 1437 aa4.71□□□□□ -1.65
SYNE2-204ENST00000358025 CDK19Q9BWU1 502 aa4.71□□□□□ -1.66
SYNE2-204ENST00000358025 OSBPL5Q9H0X9 879 aaPredicted RBP4.71□□□□□ -1.66
SYNE2-204ENST00000358025 VIPAS39Q9H9C1 493 aa4.71□□□□□ -1.66
SYNE2-204ENST00000358025 GNAT3A8MTJ3 354 aa4.71□□□□□ -1.66
SYNE2-204ENST00000358025 PPP2R3AQ06190 1150 aa4.71□□□□□ -1.66
SYNE2-204ENST00000358025 APOBRQ0VD83 1088 aa4.71□□□□□ -1.66
SYNE2-204ENST00000358025 ADALQ6DHV7 355 aa4.71□□□□□ -1.66
SYNE2-204ENST00000358025 GGA2Q9UJY4 613 aa4.71□□□□□ -1.66
SYNE2-204ENST00000358025 RPS6KA5O75582 802 aa4.71□□□□□ -1.66
SYNE2-204ENST00000358025 CYLC1P35663 651 aaPredicted RBP4.71□□□□□ -1.66
SYNE2-204ENST00000358025 ZSWIM6Q9HCJ5 1215 aa4.71□□□□□ -1.66
SYNE2-204ENST00000358025 RCOR1Q9UKL0 485 aa4.71□□□□□ -1.66
SYNE2-204ENST00000358025 LRRFIP2Q9Y608 721 aaKnown RBP4.71□□□□□ -1.66
SYNE2-204ENST00000358025 SELENOOQ9BVL4 669 aa4.71□□□□□ -1.66
SYNE2-204ENST00000358025 MBD5Q9P267 1494 aa4.71□□□□□ -1.66
SYNE2-204ENST00000358025 PHLPP2Q6ZVD8 1323 aa4.71□□□□□ -1.66
SYNE2-204ENST00000358025 LUC7L3O95232 432 aaKnown RBP4.71□□□□□ -1.66
SYNE2-204ENST00000358025 MOV10L1Q9BXT6 1211 aaKnown RBP4.71□□□□□ -1.66
SYNE2-204ENST00000358025 NUTM2FA1L443 756 aa4.71□□□□□ -1.66
SYNE2-204ENST00000358025 C8orf76Q96K31 380 aa4.71□□□□□ -1.66
SYNE2-204ENST00000358025 RASSF2P50749 326 aa4.71□□□□□ -1.66
SYNE2-204ENST00000358025 GIMAP6Q6P9H5 292 aa4.71□□□□□ -1.66
SYNE2-204ENST00000358025 ITGB1BP2Q9UKP3 347 aa4.71□□□□□ -1.66
SYNE2-204ENST00000358025 DHX37Q8IY37 1157 aaKnown RBP4.71□□□□□ -1.66
SYNE2-204ENST00000358025 ZNF274Q96GC6 653 aaPredicted RBP4.71□□□□□ -1.66
SYNE2-204ENST00000358025 MNAT1P51948 309 aa4.71□□□□□ -1.66
SYNE2-204ENST00000358025 CFAP100Q494V2 611 aa4.71□□□□□ -1.66
SYNE2-204ENST00000358025 TTF1Q15361 905 aaPredicted RBP4.71□□□□□ -1.66
SYNE2-204ENST00000358025 CCDC155Q8N6L0 562 aa4.71□□□□□ -1.66
SYNE2-204ENST00000358025 KRT86O43790 486 aa4.7□□□□□ -1.66
SYNE2-204ENST00000358025 BCL2L12Q9HB09 334 aa4.7□□□□□ -1.66
SYNE2-204ENST00000358025 CYP2E1P05181 493 aaPredicted RBP4.7□□□□□ -1.66
SYNE2-204ENST00000358025 ERCC5P28715 1186 aaPredicted RBP4.7□□□□□ -1.66
SYNE2-204ENST00000358025 PCP11498 1178 aaKnown RBP4.7□□□□□ -1.66
SYNE2-204ENST00000358025 GNAQP50148 359 aa4.7□□□□□ -1.66
SYNE2-204ENST00000358025 ARHGAP27Q6ZUM4 889 aa4.7□□□□□ -1.66
SYNE2-204ENST00000358025 MSH6P52701 1360 aa4.7□□□□□ -1.66
SYNE2-204ENST00000358025 LAMC1P11047 1609 aa4.7□□□□□ -1.66
SYNE2-204ENST00000358025 PPIP5K1Q6PFW1 1433 aa4.7□□□□□ -1.66
SYNE2-204ENST00000358025 CHMP3Q9Y3E7 222 aa4.7□□□□□ -1.66
SYNE2-204ENST00000358025 MRC2Q9UBG0 1479 aa4.7□□□□□ -1.66
SYNE2-204ENST00000358025 ANO6Q4KMQ2 910 aa4.7□□□□□ -1.66
SYNE2-204ENST00000358025 CALML3P27482 149 aa4.7□□□□□ -1.66
SYNE2-204ENST00000358025 CCDC57Q2TAC2 916 aa4.7□□□□□ -1.66
SYNE2-204ENST00000358025 CCDC181Q5TID7 509 aa4.7□□□□□ -1.66
SYNE2-204ENST00000358025 CCDC84Q86UT8 332 aaPredicted RBP4.7□□□□□ -1.66
SYNE2-204ENST00000358025 BICDL2A1A5D9 508 aa4.7□□□□□ -1.66
SYNE2-204ENST00000358025 GJB2P29033 226 aa4.7□□□□□ -1.66
SYNE2-204ENST00000358025 CWC27Q6UX04 472 aaKnown RBP4.7□□□□□ -1.66
SYNE2-204ENST00000358025 AATKQ6ZMQ8 1374 aa4.7□□□□□ -1.66
SYNE2-204ENST00000358025 SYKP43405 635 aa4.7□□□□□ -1.66
SYNE2-204ENST00000358025 PLVAPQ9BX97 442 aa4.7□□□□□ -1.66
SYNE2-204ENST00000358025 TTC12Q9H892 705 aaPredicted RBP4.7□□□□□ -1.66
SYNE2-204ENST00000358025 BATF3Q9NR55 127 aa4.7□□□□□ -1.66
SYNE2-204ENST00000358025 GNL3LQ9NVN8 582 aaKnown RBP4.7□□□□□ -1.66
SYNE2-204ENST00000358025 PIK3R4Q99570 1358 aa4.7□□□□□ -1.66
SYNE2-204ENST00000358025 CCDC102AQ96A19 550 aa4.7□□□□□ -1.66
SYNE2-204ENST00000358025 TTC21AQ8NDW8 1320 aa4.7□□□□□ -1.66
SYNE2-204ENST00000358025 CMA1P23946 247 aa4.7□□□□□ -1.66
SYNE2-204ENST00000358025 FSIP1Q8NA03 581 aa4.7□□□□□ -1.66
SYNE2-204ENST00000358025 GDAP1L1Q96MZ0 367 aa4.7□□□□□ -1.66
SYNE2-204ENST00000358025 GEMIN8Q9NWZ8 242 aaKnown RBP4.7□□□□□ -1.66
SYNE2-204ENST00000358025 SGSM2O43147 1006 aa4.7□□□□□ -1.66
SYNE2-204ENST00000358025 PTGS1P23219 599 aa4.7□□□□□ -1.66
SYNE2-204ENST00000358025 NUTM2GQ5VZR2 741 aa4.7□□□□□ -1.66
SYNE2-204ENST00000358025 IFT20Q8IY31 132 aa4.7□□□□□ -1.66
SYNE2-204ENST00000358025 SUDS3Q9H7L9 328 aaPredicted RBP4.7□□□□□ -1.66
SYNE2-204ENST00000358025 FEZ2Q9UHY8 353 aaPredicted RBP4.7□□□□□ -1.66
SYNE2-204ENST00000358025 HMGB1P1B2RPK0 211 aaPredicted RBP4.7□□□□□ -1.66
SYNE2-204ENST00000358025 WAPLQ7Z5K2 1190 aa4.7□□□□□ -1.66
SYNE2-204ENST00000358025 KIF3CO14782 793 aa4.7□□□□□ -1.66
SYNE2-204ENST00000358025 MRPS27Q92552 414 aaKnown RBP4.7□□□□□ -1.66
SYNE2-204ENST00000358025 PANX2Q96RD6 677 aa4.7□□□□□ -1.66
SYNE2-204ENST00000358025 BAG1Q99933 345 aaPredicted RBP4.7□□□□□ -1.66
SYNE2-204ENST00000358025 A0A087WUV0 522 aaPredicted RBP4.7□□□□□ -1.66
SYNE2-204ENST00000358025 HSP90AB3PQ58FF7 597 aa4.7□□□□□ -1.66
SYNE2-204ENST00000358025 KCNH5Q8NCM2 988 aa4.7□□□□□ -1.66
SYNE2-204ENST00000358025 FBXO18Q8NFZ0 1043 aa4.7□□□□□ -1.66
SYNE2-204ENST00000358025 PAIP2Q9BPZ3 127 aaKnown RBP4.7□□□□□ -1.66
SYNE2-204ENST00000358025 ZNF287Q9HBT7 754 aa4.7□□□□□ -1.66
SYNE2-204ENST00000358025 CWC25Q9NXE8 425 aaPredicted RBP4.7□□□□□ -1.66
SYNE2-204ENST00000358025 TMEM63CQ9P1W3 806 aa4.7□□□□□ -1.66
SYNE2-204ENST00000358025 ARHGEF5Q12774 1597 aa4.69□□□□□ -1.66
SYNE2-204ENST00000358025 AMOTL1Q8IY63 956 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms