RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 DACT1Q9NYF0 836 aa20.94■□□□□ 0.94
RTN4-204ENST00000357732 ATP5JP18859 108 aa20.94■□□□□ 0.94
RTN4-204ENST00000357732 GTF3C6Q969F1 213 aa20.94■□□□□ 0.94
RTN4-204ENST00000357732 CCDC8Q9H0W5 538 aaPredicted RBP20.94■□□□□ 0.94
RTN4-204ENST00000357732 TAF5LO75529 589 aa20.93■□□□□ 0.94
RTN4-204ENST00000357732 MPNDQ8N594 471 aa20.93■□□□□ 0.94
RTN4-204ENST00000357732 PYCARDQ9ULZ3 195 aa20.93■□□□□ 0.94
RTN4-204ENST00000357732 AXIN2Q9Y2T1 843 aa20.93■□□□□ 0.94
RTN4-204ENST00000357732 ZNF710Q8N1W2 664 aa20.93■□□□□ 0.94
RTN4-204ENST00000357732 BOLA2Q9H3K6 86 aa20.93■□□□□ 0.94
RTN4-204ENST00000357732 COPRSQ9NQ92 184 aa20.93■□□□□ 0.94
RTN4-204ENST00000357732 CFAP45Q9UL16 551 aa20.93■□□□□ 0.94
RTN4-204ENST00000357732 U3KPZ7 1027 aaPredicted RBP20.93■□□□□ 0.94
RTN4-204ENST00000357732 CDC25BP30305 580 aa20.92■□□□□ 0.94
RTN4-204ENST00000357732 PLA2G4DQ86XP0 818 aa20.92■□□□□ 0.94
RTN4-204ENST00000357732 LLPHQ9BRT6 129 aaKnown RBP20.92■□□□□ 0.94
RTN4-204ENST00000357732 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.92■□□□□ 0.94
RTN4-204ENST00000357732 PLEKHG2Q9H7P9 1386 aa20.92■□□□□ 0.94
RTN4-204ENST00000357732 AIMP1Q12904 312 aaKnown RBP20.92■□□□□ 0.94
RTN4-204ENST00000357732 SYCP1Q15431 976 aa20.92■□□□□ 0.94
RTN4-204ENST00000357732 TPRNQ4KMQ1 711 aa20.92■□□□□ 0.94
RTN4-204ENST00000357732 FERMT3Q86UX7 667 aa20.92■□□□□ 0.94
RTN4-204ENST00000357732 CBX8Q9HC52 389 aa20.92■□□□□ 0.94
RTN4-204ENST00000357732 CTIFO43310 598 aaKnown RBP20.91■□□□□ 0.94
RTN4-204ENST00000357732 PDIA6Q15084 440 aa20.91■□□□□ 0.94
RTN4-204ENST00000357732 C17orf53Q8N3J3 647 aaPredicted RBP20.91■□□□□ 0.94
RTN4-204ENST00000357732 IGKV5-2P06315 115 aa20.9■□□□□ 0.94
RTN4-204ENST00000357732 ANO6Q4KMQ2 910 aa20.9■□□□□ 0.94
RTN4-204ENST00000357732 NEK1Q96PY6 1258 aa20.9■□□□□ 0.94
RTN4-204ENST00000357732 TLR7Q9NYK1 1049 aaKnown RBP20.9■□□□□ 0.94
RTN4-204ENST00000357732 NEURL1BA8MQ27 555 aa20.9■□□□□ 0.94
RTN4-204ENST00000357732 CTAGE5O15320 804 aa20.9■□□□□ 0.94
RTN4-204ENST00000357732 DTNBO60941 627 aa20.9■□□□□ 0.94
RTN4-204ENST00000357732 HMGB1P09429 215 aaKnown RBP20.9■□□□□ 0.94
RTN4-204ENST00000357732 ATL3Q6DD88 541 aa20.9■□□□□ 0.94
RTN4-204ENST00000357732 RIC3Q7Z5B4 369 aa20.9■□□□□ 0.94
RTN4-204ENST00000357732 RESTQ13127 1097 aa20.89■□□□□ 0.94
RTN4-204ENST00000357732 GCKRQ14397 625 aa20.89■□□□□ 0.94
RTN4-204ENST00000357732 LUZP1Q86V48 1076 aa20.89■□□□□ 0.94
RTN4-204ENST00000357732 SPC24Q8NBT2 197 aa20.89■□□□□ 0.94
RTN4-204ENST00000357732 CHMP4CQ96CF2 233 aa20.89■□□□□ 0.94
RTN4-204ENST00000357732 ZNF75DP51815 510 aa20.89■□□□□ 0.93
RTN4-204ENST00000357732 ZNF589Q86UQ0 364 aaPredicted RBP20.89■□□□□ 0.93
RTN4-204ENST00000357732 BCL2L12Q9HB09 334 aa20.89■□□□□ 0.93
RTN4-204ENST00000357732 ABCC6O95255 1503 aa20.88■□□□□ 0.93
RTN4-204ENST00000357732 CAMK4Q16566 473 aa20.88■□□□□ 0.93
RTN4-204ENST00000357732 METTL22Q9BUU2 404 aaPredicted RBP20.88■□□□□ 0.93
RTN4-204ENST00000357732 SARM1Q6SZW1 724 aa20.88■□□□□ 0.93
RTN4-204ENST00000357732 DDX54Q8TDD1 881 aaKnown RBP20.88■□□□□ 0.93
RTN4-204ENST00000357732 ANKRD7Q92527 254 aa20.88■□□□□ 0.93
RTN4-204ENST00000357732 PTGS1P23219 599 aa20.87■□□□□ 0.93
RTN4-204ENST00000357732 BICD2Q8TD16 824 aa20.87■□□□□ 0.93
RTN4-204ENST00000357732 SCN11AQ9UI33 1791 aa20.87■□□□□ 0.93
RTN4-204ENST00000357732 NEMFO60524 1076 aa20.87■□□□□ 0.93
RTN4-204ENST00000357732 ZNF165P49910 485 aa20.87■□□□□ 0.93
RTN4-204ENST00000357732 UTP14CQ5TAP6 766 aaKnown RBP20.87■□□□□ 0.93
RTN4-204ENST00000357732 NAA16Q6N069 864 aaPredicted RBP20.87■□□□□ 0.93
RTN4-204ENST00000357732 SMARCC2Q8TAQ2 1214 aa20.87■□□□□ 0.93
RTN4-204ENST00000357732 RIOK3O14730 519 aaKnown RBP20.86■□□□□ 0.93
RTN4-204ENST00000357732 SLC39A6Q13433 755 aa20.86■□□□□ 0.93
RTN4-204ENST00000357732 RABL6Q3YEC7 729 aaPredicted RBP20.86■□□□□ 0.93
RTN4-204ENST00000357732 FAM173BQ6P4H8 233 aa20.86■□□□□ 0.93
RTN4-204ENST00000357732 TRIM5Q9C035 493 aa20.86■□□□□ 0.93
RTN4-204ENST00000357732 C5P01031 1676 aa20.86■□□□□ 0.93
RTN4-204ENST00000357732 MYH15Q9Y2K3 1946 aa20.86■□□□□ 0.93
RTN4-204ENST00000357732 H3BQV1 296 aa20.86■□□□□ 0.93
RTN4-204ENST00000357732 TNNI3KQ59H18 835 aa20.86■□□□□ 0.93
RTN4-204ENST00000357732 IFFO2Q5TF58 517 aa20.86■□□□□ 0.93
RTN4-204ENST00000357732 ZNF790Q6PG37 636 aa20.86■□□□□ 0.93
RTN4-204ENST00000357732 CKAP2LQ8IYA6 745 aa20.86■□□□□ 0.93
RTN4-204ENST00000357732 PGBD1Q96JS3 809 aa20.86■□□□□ 0.93
RTN4-204ENST00000357732 SIL1Q9H173 461 aa20.86■□□□□ 0.93
RTN4-204ENST00000357732 FPGT-TNNI3KV9GXZ4 949 aa20.86■□□□□ 0.93
RTN4-204ENST00000357732 MST1RQ04912 1400 aa20.86■□□□□ 0.93
RTN4-204ENST00000357732 MCMDC2Q4G0Z9 681 aa20.85■□□□□ 0.93
RTN4-204ENST00000357732 CCDC186Q7Z3E2 898 aa20.85■□□□□ 0.93
RTN4-204ENST00000357732 TFIP11Q9UBB9 837 aaKnown RBP20.85■□□□□ 0.93
RTN4-204ENST00000357732 PAXBP1Q9Y5B6 917 aa20.85■□□□□ 0.93
RTN4-204ENST00000357732 SH3TC1Q8TE82 1336 aa20.85■□□□□ 0.93
RTN4-204ENST00000357732 NR1I2O75469 434 aa20.85■□□□□ 0.93
RTN4-204ENST00000357732 BRF1Q92994 677 aa20.85■□□□□ 0.93
RTN4-204ENST00000357732 SMTNL1A8MU46 457 aa20.84■□□□□ 0.93
RTN4-204ENST00000357732 ZSCAN25Q6NSZ9 544 aa20.84■□□□□ 0.93
RTN4-204ENST00000357732 KLHDC4Q8TBB5 520 aa20.84■□□□□ 0.93
RTN4-204ENST00000357732 HAUS7Q99871 368 aa20.84■□□□□ 0.93
RTN4-204ENST00000357732 DBNLQ9UJU6 430 aaKnown RBP20.84■□□□□ 0.93
RTN4-204ENST00000357732 CHMP3Q9Y3E7 222 aa20.84■□□□□ 0.93
RTN4-204ENST00000357732 TAF6LQ9Y6J9 622 aa20.84■□□□□ 0.93
RTN4-204ENST00000357732 PFKFB2O60825 505 aa20.83■□□□□ 0.93
RTN4-204ENST00000357732 MYL6BP14649 208 aa20.83■□□□□ 0.93
RTN4-204ENST00000357732 RFX5P48382 616 aaPredicted RBP20.83■□□□□ 0.93
RTN4-204ENST00000357732 KRT28Q7Z3Y7 464 aa20.83■□□□□ 0.93
RTN4-204ENST00000357732 DRC7Q8IY82 874 aa20.83■□□□□ 0.93
RTN4-204ENST00000357732 PDCL2Q8N4E4 241 aa20.83■□□□□ 0.93
RTN4-204ENST00000357732 MRFAP1L1Q96HT8 127 aa20.83■□□□□ 0.93
RTN4-204ENST00000357732 TCEANC2Q96MN5 208 aa20.83■□□□□ 0.93
RTN4-204ENST00000357732 PRDM4Q9UKN5 801 aa20.83■□□□□ 0.93
RTN4-204ENST00000357732 COL9A3Q14050 684 aaPredicted RBP20.83■□□□□ 0.93
RTN4-204ENST00000357732 Q6ZUG5 572 aa20.83■□□□□ 0.93
RTN4-204ENST00000357732 PALLDQ8WX93 1383 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms