RNA–Protein interactions for RNA: ENST00000357559.8

FXR1-202, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FXR1, Length 8,711 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-202ENST00000357559 HGSO14964 777 aaPredicted RBP12.02□□□□□ -0.49
FXR1-202ENST00000357559 N4BP3O15049 544 aa12.02□□□□□ -0.49
FXR1-202ENST00000357559 USP16Q9Y5T5 823 aa12.02□□□□□ -0.49
FXR1-202ENST00000357559 MAK16Q9BXY0 300 aaKnown RBP12.02□□□□□ -0.49
FXR1-202ENST00000357559 ZEB2O60315 1214 aa12.02□□□□□ -0.49
FXR1-202ENST00000357559 HLA-DOAP06340 250 aa12.02□□□□□ -0.49
FXR1-202ENST00000357559 GABPAQ06546 454 aa12.02□□□□□ -0.49
FXR1-202ENST00000357559 IFT81Q8WYA0 676 aa12.02□□□□□ -0.49
FXR1-202ENST00000357559 SEC62Q99442 399 aaKnown RBP12.02□□□□□ -0.49
FXR1-202ENST00000357559 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.02□□□□□ -0.49
FXR1-202ENST00000357559 RASAL2Q9UJF2 1139 aa12.02□□□□□ -0.49
FXR1-202ENST00000357559 V9GYY5 206 aaPredicted RBP12.02□□□□□ -0.49
FXR1-202ENST00000357559 PSMD6Q15008 389 aa12.01□□□□□ -0.49
FXR1-202ENST00000357559 TAF7Q15545 349 aaPredicted RBP12.01□□□□□ -0.49
FXR1-202ENST00000357559 CIZ1Q9ULV3 898 aaPredicted RBP12.01□□□□□ -0.49
FXR1-202ENST00000357559 NSRP1Q9H0G5 558 aaKnown RBP12.01□□□□□ -0.49
FXR1-202ENST00000357559 PDE3AQ14432 1141 aa12.01□□□□□ -0.49
FXR1-202ENST00000357559 MICALL1Q8N3F8 863 aa12.01□□□□□ -0.49
FXR1-202ENST00000357559 PDE4BQ07343 736 aa12.01□□□□□ -0.49
FXR1-202ENST00000357559 SF3A3Q12874 501 aaKnown RBP eCLIP12.01□□□□□ -0.49
FXR1-202ENST00000357559 SELENOOQ9BVL4 669 aa12.01□□□□□ -0.49
FXR1-202ENST00000357559 BACH2Q9BYV9 841 aa12.01□□□□□ -0.49
FXR1-202ENST00000357559 PKD2L1Q9P0L9 805 aa12.01□□□□□ -0.49
FXR1-202ENST00000357559 SEPT6Q14141 434 aa12.01□□□□□ -0.49
FXR1-202ENST00000357559 FAM13AO94988 1023 aa12.01□□□□□ -0.49
FXR1-202ENST00000357559 ANKS4BQ8N8V4 417 aa12.01□□□□□ -0.49
FXR1-202ENST00000357559 AKR1B10O60218 316 aa12□□□□□ -0.49
FXR1-202ENST00000357559 KIF5BP33176 963 aa12□□□□□ -0.49
FXR1-202ENST00000357559 UBASH3AP57075 661 aa12□□□□□ -0.49
FXR1-202ENST00000357559 CCT6BQ92526 530 aa12□□□□□ -0.49
FXR1-202ENST00000357559 PLIN2Q99541 437 aa12□□□□□ -0.49
FXR1-202ENST00000357559 GLRX3O76003 335 aaKnown RBP12□□□□□ -0.49
FXR1-202ENST00000357559 IFI16Q16666 785 aaKnown RBP12□□□□□ -0.49
FXR1-202ENST00000357559 GIMAP6Q6P9H5 292 aa12□□□□□ -0.49
FXR1-202ENST00000357559 STAC3Q96MF2 364 aa12□□□□□ -0.49
FXR1-202ENST00000357559 KRT9P35527 623 aa12□□□□□ -0.49
FXR1-202ENST00000357559 SCAND2PQ9GZW5 306 aaPredicted RBP12□□□□□ -0.49
FXR1-202ENST00000357559 VEZTQ9HBM0 779 aa12□□□□□ -0.49
FXR1-202ENST00000357559 HARSP12081 509 aaKnown RBP12□□□□□ -0.49
FXR1-202ENST00000357559 RFC4P35249 363 aa12□□□□□ -0.49
FXR1-202ENST00000357559 IARSP41252 1262 aaKnown RBP12□□□□□ -0.49
FXR1-202ENST00000357559 PDE1CQ14123 709 aaPredicted RBP12□□□□□ -0.49
FXR1-202ENST00000357559 NGLY1Q96IV0 654 aa12□□□□□ -0.49
FXR1-202ENST00000357559 RNF41Q9H4P4 317 aaPredicted RBP12□□□□□ -0.49
FXR1-202ENST00000357559 TTC12Q9H892 705 aaPredicted RBP12□□□□□ -0.49
FXR1-202ENST00000357559 MAP3K2Q9Y2U5 619 aa12□□□□□ -0.49
FXR1-202ENST00000357559 IFIT1BQ5T764 474 aaKnown RBP11.99□□□□□ -0.49
FXR1-202ENST00000357559 SPAG5Q96R06 1193 aa11.99□□□□□ -0.49
FXR1-202ENST00000357559 FAM169AQ9Y6X4 670 aa11.99□□□□□ -0.49
FXR1-202ENST00000357559 JAG2Q9Y219 1238 aa11.99□□□□□ -0.49
FXR1-202ENST00000357559 GMNNO75496 209 aa11.99□□□□□ -0.49
FXR1-202ENST00000357559 MARCKSP29966 332 aaPredicted RBP11.99□□□□□ -0.49
FXR1-202ENST00000357559 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.99□□□□□ -0.49
FXR1-202ENST00000357559 KRT5P13647 590 aa11.99□□□□□ -0.49
FXR1-202ENST00000357559 DDX46Q7L014 1031 aaKnown RBP11.99□□□□□ -0.49
FXR1-202ENST00000357559 POTEB2H3BUK9 544 aa11.99□□□□□ -0.49
FXR1-202ENST00000357559 PPP1R7Q15435 360 aa11.99□□□□□ -0.49
FXR1-202ENST00000357559 CCDC170Q8IYT3 715 aa11.99□□□□□ -0.49
FXR1-202ENST00000357559 CEP83Q9Y592 693 aa11.99□□□□□ -0.49
FXR1-202ENST00000357559 RFX1P22670 979 aa11.99□□□□□ -0.49
FXR1-202ENST00000357559 LRRC43Q8N309 656 aa11.98□□□□□ -0.49
FXR1-202ENST00000357559 BIRC2Q13490 618 aa11.98□□□□□ -0.49
FXR1-202ENST00000357559 AFAP1Q8N556 730 aa11.98□□□□□ -0.49
FXR1-202ENST00000357559 ACSBG1Q96GR2 724 aa11.98□□□□□ -0.49
FXR1-202ENST00000357559 TLDC2A0PJX2 215 aa11.98□□□□□ -0.49
FXR1-202ENST00000357559 MKRN1Q9UHC7 482 aaKnown RBP11.98□□□□□ -0.49
FXR1-202ENST00000357559 UBLCP1Q8WVY7 318 aaPredicted RBP11.98□□□□□ -0.49
FXR1-202ENST00000357559 TRIM7Q9C029 511 aa11.98□□□□□ -0.49
FXR1-202ENST00000357559 NECAB1Q8N987 351 aa11.98□□□□□ -0.49
FXR1-202ENST00000357559 CTAGE5O15320 804 aa11.98□□□□□ -0.49
FXR1-202ENST00000357559 BAG3O95817 575 aa11.98□□□□□ -0.49
FXR1-202ENST00000357559 RNF34Q969K3 372 aa11.98□□□□□ -0.49
FXR1-202ENST00000357559 FEZ2Q9UHY8 353 aaPredicted RBP11.98□□□□□ -0.49
FXR1-202ENST00000357559 AGTPBP1Q9UPW5 1226 aa11.98□□□□□ -0.49
FXR1-202ENST00000357559 HMGB1P09429 215 aaKnown RBP11.98□□□□□ -0.49
FXR1-202ENST00000357559 ST5P78524 1137 aa11.98□□□□□ -0.49
FXR1-202ENST00000357559 PPP1R9BQ96SB3 815 aa11.98□□□□□ -0.49
FXR1-202ENST00000357559 FAM184BQ9ULE4 1060 aa11.98□□□□□ -0.49
FXR1-202ENST00000357559 SARNPP82979 210 aaKnown RBP11.97□□□□□ -0.49
FXR1-202ENST00000357559 SBNO2Q9Y2G9 1366 aa11.97□□□□□ -0.49
FXR1-202ENST00000357559 IMPG2Q9BZV3 1241 aa11.97□□□□□ -0.49
FXR1-202ENST00000357559 KIF5AQ12840 1032 aa11.97□□□□□ -0.49
FXR1-202ENST00000357559 HSPA1LP34931 641 aa11.97□□□□□ -0.49
FXR1-202ENST00000357559 DCAF17Q5H9S7 520 aaPredicted RBP11.97□□□□□ -0.49
FXR1-202ENST00000357559 SYKP43405 635 aa11.97□□□□□ -0.49
FXR1-202ENST00000357559 GSDMDP57764 484 aa11.97□□□□□ -0.49
FXR1-202ENST00000357559 NCBP1Q09161 790 aaKnown RBP11.97□□□□□ -0.49
FXR1-202ENST00000357559 PLVAPQ9BX97 442 aa11.97□□□□□ -0.49
FXR1-202ENST00000357559 ORC3Q9UBD5 711 aaPredicted RBP11.97□□□□□ -0.49
FXR1-202ENST00000357559 ANO6Q4KMQ2 910 aa11.97□□□□□ -0.49
FXR1-202ENST00000357559 VPS18Q9P253 973 aa11.97□□□□□ -0.49
FXR1-202ENST00000357559 DYNC1I1O14576 645 aa11.97□□□□□ -0.49
FXR1-202ENST00000357559 CCDC172P0C7W6 258 aa11.97□□□□□ -0.49
FXR1-202ENST00000357559 CUL4BQ13620 913 aa11.97□□□□□ -0.49
FXR1-202ENST00000357559 KARSQ15046 597 aaKnown RBP11.97□□□□□ -0.49
FXR1-202ENST00000357559 CEP120Q8N960 986 aa11.97□□□□□ -0.49
FXR1-202ENST00000357559 LIMCH1Q9UPQ0 1083 aa11.97□□□□□ -0.49
FXR1-202ENST00000357559 ANKRD30BQ9BXX2 1392 aa11.97□□□□□ -0.49
FXR1-202ENST00000357559 CCDC129Q6ZRS4 1044 aa11.96□□□□□ -0.49
FXR1-202ENST00000357559 NOP9Q86U38 636 aaKnown RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms