RNA–Protein interactions for RNA: ENST00000357428.5

USP33-201, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 5 BASIC

Gene USP33, Length 4,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-201ENST00000357428 RIMS1Q86UR5 1692 aaKnown RBP4.32□□□□□ -1.72
USP33-201ENST00000357428 CCDC192P0DO97 292 aa4.32□□□□□ -1.72
USP33-201ENST00000357428 XRCC6P12956 609 aaKnown RBP eCLIP4.32□□□□□ -1.72
USP33-201ENST00000357428 SLC5A1P13866 664 aa4.32□□□□□ -1.72
USP33-201ENST00000357428 TIMM10P62072 90 aa4.32□□□□□ -1.72
USP33-201ENST00000357428 ZSCAN23Q3MJ62 389 aa4.32□□□□□ -1.72
USP33-201ENST00000357428 TNNI3KQ59H18 835 aa4.32□□□□□ -1.72
USP33-201ENST00000357428 DNAJC10Q8IXB1 793 aa4.32□□□□□ -1.72
USP33-201ENST00000357428 TFIP11Q9UBB9 837 aaKnown RBP4.32□□□□□ -1.72
USP33-201ENST00000357428 ZNF652Q9Y2D9 606 aa4.32□□□□□ -1.72
USP33-201ENST00000357428 SNX14Q9Y5W7 946 aa4.32□□□□□ -1.72
USP33-201ENST00000357428 FPGT-TNNI3KV9GXZ4 949 aa4.32□□□□□ -1.72
USP33-201ENST00000357428 FER1L4A9Z1Z3 1794 aa4.32□□□□□ -1.72
USP33-201ENST00000357428 CCDC69A6NI79 296 aa4.32□□□□□ -1.72
USP33-201ENST00000357428 GOLGA8BA8MQT2 603 aa4.32□□□□□ -1.72
USP33-201ENST00000357428 ESPNB1AK53 854 aa4.32□□□□□ -1.72
USP33-201ENST00000357428 ZSCAN22P10073 491 aaPredicted RBP4.32□□□□□ -1.72
USP33-201ENST00000357428 ATP6V1AP38606 617 aa4.32□□□□□ -1.72
USP33-201ENST00000357428 DDB1Q16531 1140 aa4.32□□□□□ -1.72
USP33-201ENST00000357428 MCMDC2Q4G0Z9 681 aa4.32□□□□□ -1.72
USP33-201ENST00000357428 TTLL7Q6ZT98 887 aa4.32□□□□□ -1.72
USP33-201ENST00000357428 DZIP3Q86Y13 1208 aaKnown RBP4.32□□□□□ -1.72
USP33-201ENST00000357428 HELBQ8NG08 1087 aaPredicted RBP4.32□□□□□ -1.72
USP33-201ENST00000357428 TRIM5Q9C035 493 aa4.32□□□□□ -1.72
USP33-201ENST00000357428 CEP170BQ9Y4F5 1589 aaPredicted RBP4.31□□□□□ -1.72
USP33-201ENST00000357428 CCDC183Q5T5S1 534 aa4.31□□□□□ -1.72
USP33-201ENST00000357428 EAF2Q96CJ1 260 aaPredicted RBP4.31□□□□□ -1.72
USP33-201ENST00000357428 NAPBQ9H115 298 aa4.31□□□□□ -1.72
USP33-201ENST00000357428 REREQ9P2R6 1566 aa4.31□□□□□ -1.72
USP33-201ENST00000357428 MINDY4BA8MYZ0 360 aa4.31□□□□□ -1.72
USP33-201ENST00000357428 ZNF213O14771 459 aa4.31□□□□□ -1.72
USP33-201ENST00000357428 HMGB1P09429 215 aaKnown RBP4.31□□□□□ -1.72
USP33-201ENST00000357428 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.31□□□□□ -1.72
USP33-201ENST00000357428 Q6ZUG5 572 aa4.31□□□□□ -1.72
USP33-201ENST00000357428 IQSEC3Q9UPP2 1182 aaPredicted RBP4.31□□□□□ -1.72
USP33-201ENST00000357428 A0A1B0GUL7 405 aa4.31□□□□□ -1.72
USP33-201ENST00000357428 EYA2O00167 538 aa4.31□□□□□ -1.72
USP33-201ENST00000357428 IRS4O14654 1257 aaPredicted RBP4.31□□□□□ -1.72
USP33-201ENST00000357428 HSPA4P34932 840 aa4.31□□□□□ -1.72
USP33-201ENST00000357428 MAP3K12Q12852 859 aa4.31□□□□□ -1.72
USP33-201ENST00000357428 PKP1Q13835 747 aa4.31□□□□□ -1.72
USP33-201ENST00000357428 MAP3K11Q16584 847 aa4.31□□□□□ -1.72
USP33-201ENST00000357428 CHST3Q7LGC8 479 aa4.31□□□□□ -1.72
USP33-201ENST00000357428 USP48Q86UV5 1035 aa4.31□□□□□ -1.72
USP33-201ENST00000357428 TLR7Q9NYK1 1049 aaKnown RBP4.31□□□□□ -1.72
USP33-201ENST00000357428 CFAP45Q9UL16 551 aa4.31□□□□□ -1.72
USP33-201ENST00000357428 R3HCC1Q9Y3T6 440 aaKnown RBP4.31□□□□□ -1.72
USP33-201ENST00000357428 PES1O00541 588 aaKnown RBP4.3□□□□□ -1.72
USP33-201ENST00000357428 SLC27A2O14975 620 aa4.3□□□□□ -1.72
USP33-201ENST00000357428 ZPR1O75312 459 aa4.3□□□□□ -1.72
USP33-201ENST00000357428 F13A1P00488 732 aa4.3□□□□□ -1.72
USP33-201ENST00000357428 PTH1RQ03431 593 aa4.3□□□□□ -1.72
USP33-201ENST00000357428 DNM1Q05193 864 aaKnown RBP4.3□□□□□ -1.72
USP33-201ENST00000357428 RUFY3Q7L099 469 aa4.3□□□□□ -1.72
USP33-201ENST00000357428 CCDC144CPQ8IYA2 1237 aa4.3□□□□□ -1.72
USP33-201ENST00000357428 CKAP2LQ8IYA6 745 aa4.3□□□□□ -1.72
USP33-201ENST00000357428 TRIM22Q8IYM9 498 aa4.3□□□□□ -1.72
USP33-201ENST00000357428 CCDC82Q8N4S0 544 aa4.3□□□□□ -1.72
USP33-201ENST00000357428 ZNF592Q92610 1267 aa4.3□□□□□ -1.72
USP33-201ENST00000357428 CHAMP1Q96JM3 812 aa4.3□□□□□ -1.72
USP33-201ENST00000357428 C8orf76Q96K31 380 aa4.3□□□□□ -1.72
USP33-201ENST00000357428 UBAC1Q9BSL1 405 aa4.3□□□□□ -1.72
USP33-201ENST00000357428 OSBPL3Q9H4L5 887 aa4.3□□□□□ -1.72
USP33-201ENST00000357428 ANTXR1Q9H6X2 564 aa4.3□□□□□ -1.72
USP33-201ENST00000357428 ZNF335Q9H4Z2 1342 aaPredicted RBP4.3□□□□□ -1.72
USP33-201ENST00000357428 LMTK3Q96Q04 1460 aa4.3□□□□□ -1.72
USP33-201ENST00000357428 A0A0D9SFI3 127 aa4.3□□□□□ -1.72
USP33-201ENST00000357428 TPD52L1Q16890 204 aaPredicted RBP4.3□□□□□ -1.72
USP33-201ENST00000357428 CCDC191Q8NCU4 936 aa4.3□□□□□ -1.72
USP33-201ENST00000357428 PIBF1Q8WXW3 757 aa4.3□□□□□ -1.72
USP33-201ENST00000357428 INTS4Q96HW7 963 aaKnown RBP4.3□□□□□ -1.72
USP33-201ENST00000357428 C8orf37Q96NL8 207 aa4.3□□□□□ -1.72
USP33-201ENST00000357428 SCAND2PQ9GZW5 306 aaPredicted RBP4.3□□□□□ -1.72
USP33-201ENST00000357428 STAP2Q9UGK3 403 aa4.3□□□□□ -1.72
USP33-201ENST00000357428 NIP7Q9Y221 180 aaKnown RBP eCLIP4.3□□□□□ -1.72
USP33-201ENST00000357428 NCAPD2Q15021 1401 aa4.3□□□□□ -1.72
USP33-201ENST00000357428 CYP27B1O15528 508 aa4.3□□□□□ -1.72
USP33-201ENST00000357428 RNF113AO15541 343 aaKnown RBP4.3□□□□□ -1.72
USP33-201ENST00000357428 MARCH6O60337 910 aa4.3□□□□□ -1.72
USP33-201ENST00000357428 CDKL5O76039 1030 aa4.3□□□□□ -1.72
USP33-201ENST00000357428 XBP1P17861 261 aa4.3□□□□□ -1.72
USP33-201ENST00000357428 CDK11BP21127 795 aaKnown RBP4.3□□□□□ -1.72
USP33-201ENST00000357428 SYT1P21579 422 aa4.3□□□□□ -1.72
USP33-201ENST00000357428 PRIM1P49642 420 aaKnown RBP4.3□□□□□ -1.72
USP33-201ENST00000357428 HMGN5P82970 282 aaKnown RBP4.3□□□□□ -1.72
USP33-201ENST00000357428 VPS53Q5VIR6 699 aa4.3□□□□□ -1.72
USP33-201ENST00000357428 MICU3Q86XE3 530 aa4.3□□□□□ -1.72
USP33-201ENST00000357428 BRMS1Q9HCU9 246 aa4.3□□□□□ -1.72
USP33-201ENST00000357428 USP25Q9UHP3 1055 aa4.3□□□□□ -1.72
USP33-201ENST00000357428 WDR17Q8IZU2 1322 aa4.3□□□□□ -1.72
USP33-201ENST00000357428 SSH2Q76I76 1423 aa4.3□□□□□ -1.72
USP33-201ENST00000357428 C1orf167Q5SNV9 1468 aa4.29□□□□□ -1.72
USP33-201ENST00000357428 KLF18A0A0U1RQI7 1052 aa4.29□□□□□ -1.72
USP33-201ENST00000357428 ERVV-2B6SEH9 535 aa4.29□□□□□ -1.72
USP33-201ENST00000357428 HCLS1P14317 486 aaPredicted RBP4.29□□□□□ -1.72
USP33-201ENST00000357428 UBE2HP62256 183 aa4.29□□□□□ -1.72
USP33-201ENST00000357428 APOBRQ0VD83 1088 aa4.29□□□□□ -1.72
USP33-201ENST00000357428 TTF1Q15361 905 aaPredicted RBP4.29□□□□□ -1.72
USP33-201ENST00000357428 CAVIN4Q5BKX8 364 aa4.29□□□□□ -1.72
USP33-201ENST00000357428 SLC9C2Q5TAH2 1124 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms