RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.36■□□□□ 0.05
RTFDC1-202ENST00000357348 KIAA1211Q6ZU35 1233 aa15.36■□□□□ 0.05
RTFDC1-202ENST00000357348 ARHGEF1Q92888 912 aaKnown RBP15.36■□□□□ 0.05
RTFDC1-202ENST00000357348 ISCA1Q9BUE6 129 aa15.36■□□□□ 0.05
RTFDC1-202ENST00000357348 ATP8B2P98198 1209 aa15.35■□□□□ 0.05
RTFDC1-202ENST00000357348 EN1Q05925 392 aaPredicted RBP15.35■□□□□ 0.05
RTFDC1-202ENST00000357348 RC3H1Q5TC82 1133 aaKnown RBP15.35■□□□□ 0.05
RTFDC1-202ENST00000357348 USPL1Q5W0Q7 1092 aa15.35■□□□□ 0.05
RTFDC1-202ENST00000357348 CCDC191Q8NCU4 936 aa15.35■□□□□ 0.05
RTFDC1-202ENST00000357348 EXOC6BQ9Y2D4 811 aa15.35■□□□□ 0.05
RTFDC1-202ENST00000357348 TNS1Q9HBL0 1735 aaKnown RBP15.35■□□□□ 0.05
RTFDC1-202ENST00000357348 ANKRD36CQ5JPF3 1778 aa15.35■□□□□ 0.05
RTFDC1-202ENST00000357348 ERVV-1B6SEH8 477 aa15.35■□□□□ 0.05
RTFDC1-202ENST00000357348 ZNF500O60304 480 aaPredicted RBP15.35■□□□□ 0.05
RTFDC1-202ENST00000357348 SLC27A3Q5K4L6 730 aa15.35■□□□□ 0.05
RTFDC1-202ENST00000357348 CCDC85AQ96PX6 553 aaPredicted RBP15.35■□□□□ 0.05
RTFDC1-202ENST00000357348 NOL7Q9UMY1 257 aaKnown RBP15.35■□□□□ 0.05
RTFDC1-202ENST00000357348 UBN2Q6ZU65 1347 aa15.35■□□□□ 0.05
RTFDC1-202ENST00000357348 NLRP10Q86W26 655 aa15.34■□□□□ 0.05
RTFDC1-202ENST00000357348 CHMP3Q9Y3E7 222 aa15.34■□□□□ 0.05
RTFDC1-202ENST00000357348 UTYO14607 1347 aa15.33■□□□□ 0.05
RTFDC1-202ENST00000357348 PLSCR1O15162 318 aa15.33■□□□□ 0.05
RTFDC1-202ENST00000357348 EZH2Q15910 746 aaKnown RBP15.33■□□□□ 0.05
RTFDC1-202ENST00000357348 TRAPPC3LQ5T215 181 aa15.33■□□□□ 0.05
RTFDC1-202ENST00000357348 MCTP1Q6DN14 999 aa15.33■□□□□ 0.05
RTFDC1-202ENST00000357348 NIP7Q9Y221 180 aaKnown RBP eCLIP15.33■□□□□ 0.05
RTFDC1-202ENST00000357348 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.33■□□□□ 0.04
RTFDC1-202ENST00000357348 ZPR1O75312 459 aa15.33■□□□□ 0.04
RTFDC1-202ENST00000357348 HMMRO75330 724 aa15.33■□□□□ 0.04
RTFDC1-202ENST00000357348 RFC4P35249 363 aa15.33■□□□□ 0.04
RTFDC1-202ENST00000357348 HSP90AB3PQ58FF7 597 aa15.33■□□□□ 0.04
RTFDC1-202ENST00000357348 KLHDC4Q8TBB5 520 aa15.33■□□□□ 0.04
RTFDC1-202ENST00000357348 TRMT112Q9UI30 125 aaKnown RBP15.33■□□□□ 0.04
RTFDC1-202ENST00000357348 H7C1W4 665 aa15.32■□□□□ 0.04
RTFDC1-202ENST00000357348 SMARCA5O60264 1052 aaPredicted RBP15.32■□□□□ 0.04
RTFDC1-202ENST00000357348 MSNP26038 577 aaKnown RBP15.32■□□□□ 0.04
RTFDC1-202ENST00000357348 CASP7P55210 303 aa15.32■□□□□ 0.04
RTFDC1-202ENST00000357348 DEFB132Q7Z7B7 95 aa15.32■□□□□ 0.04
RTFDC1-202ENST00000357348 RBSNQ9H1K0 784 aa15.32■□□□□ 0.04
RTFDC1-202ENST00000357348 PA2G4Q9UQ80 394 aaKnown RBP15.32■□□□□ 0.04
RTFDC1-202ENST00000357348 UBR3Q6ZT12 1888 aa15.32■□□□□ 0.04
RTFDC1-202ENST00000357348 ZNF827Q17R98 1081 aa15.32■□□□□ 0.04
RTFDC1-202ENST00000357348 SUSD4Q5VX71 490 aa15.32■□□□□ 0.04
RTFDC1-202ENST00000357348 CAVIN1Q6NZI2 390 aaKnown RBP15.32■□□□□ 0.04
RTFDC1-202ENST00000357348 ZNF34Q8IZ26 560 aa15.32■□□□□ 0.04
RTFDC1-202ENST00000357348 PKNOX2Q96KN3 472 aa15.32■□□□□ 0.04
RTFDC1-202ENST00000357348 ZMYND15Q9H091 742 aa15.32■□□□□ 0.04
RTFDC1-202ENST00000357348 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.32■□□□□ 0.04
RTFDC1-202ENST00000357348 ZDHHC9Q9Y397 364 aa15.32■□□□□ 0.04
RTFDC1-202ENST00000357348 C4AP0C0L4 1744 aa15.32■□□□□ 0.04
RTFDC1-202ENST00000357348 TBC1D9BQ66K14 1250 aa15.31■□□□□ 0.04
RTFDC1-202ENST00000357348 BCL2L12Q9HB09 334 aa15.31■□□□□ 0.04
RTFDC1-202ENST00000357348 TFCP2L1Q9NZI6 479 aa15.31■□□□□ 0.04
RTFDC1-202ENST00000357348 BCORQ6W2J9 1755 aa15.31■□□□□ 0.04
RTFDC1-202ENST00000357348 SURF6O75683 361 aaKnown RBP15.31■□□□□ 0.04
RTFDC1-202ENST00000357348 MCM5P33992 734 aa15.31■□□□□ 0.04
RTFDC1-202ENST00000357348 LMBR1LQ6UX01 489 aa15.31■□□□□ 0.04
RTFDC1-202ENST00000357348 NUTM1Q86Y26 1132 aa15.31■□□□□ 0.04
RTFDC1-202ENST00000357348 SIL1Q9H173 461 aa15.31■□□□□ 0.04
RTFDC1-202ENST00000357348 NARFQ9UHQ1 456 aa15.31■□□□□ 0.04
RTFDC1-202ENST00000357348 ST18O60284 1047 aa15.3■□□□□ 0.04
RTFDC1-202ENST00000357348 PKP1Q13835 747 aa15.3■□□□□ 0.04
RTFDC1-202ENST00000357348 GPT2Q8TD30 523 aa15.3■□□□□ 0.04
RTFDC1-202ENST00000357348 SSH3Q8TE77 659 aa15.3■□□□□ 0.04
RTFDC1-202ENST00000357348 ZNF652Q9Y2D9 606 aa15.3■□□□□ 0.04
RTFDC1-202ENST00000357348 SDSP20132 328 aa15.29■□□□□ 0.04
RTFDC1-202ENST00000357348 TRIM28Q13263 835 aaKnown RBP15.29■□□□□ 0.04
RTFDC1-202ENST00000357348 SF3B2Q13435 895 aaKnown RBP15.29■□□□□ 0.04
RTFDC1-202ENST00000357348 C16orf71Q8IYS4 520 aaPredicted RBP15.29■□□□□ 0.04
RTFDC1-202ENST00000357348 CCDC24Q8N4L8 307 aa15.29■□□□□ 0.04
RTFDC1-202ENST00000357348 ZBTB38Q8NAP3 1195 aaPredicted RBP15.29■□□□□ 0.04
RTFDC1-202ENST00000357348 FOXO4P98177 505 aa15.29■□□□□ 0.04
RTFDC1-202ENST00000357348 HDAC5Q9UQL6 1122 aa15.29■□□□□ 0.04
RTFDC1-202ENST00000357348 PCCAP05165 728 aaPredicted RBP15.28■□□□□ 0.04
RTFDC1-202ENST00000357348 HCLS1P14317 486 aaPredicted RBP15.28■□□□□ 0.04
RTFDC1-202ENST00000357348 POLA2Q14181 598 aa15.28■□□□□ 0.04
RTFDC1-202ENST00000357348 LRSAM1Q6UWE0 723 aa15.28■□□□□ 0.04
RTFDC1-202ENST00000357348 OSBPL3Q9H4L5 887 aa15.28■□□□□ 0.04
RTFDC1-202ENST00000357348 CASC1Q6TDU7 716 aa15.28■□□□□ 0.04
RTFDC1-202ENST00000357348 SCN7AQ01118 1682 aa15.28■□□□□ 0.04
RTFDC1-202ENST00000357348 USP42Q9H9J4 1324 aaKnown RBP15.27■□□□□ 0.04
RTFDC1-202ENST00000357348 IRS4O14654 1257 aaPredicted RBP15.27■□□□□ 0.04
RTFDC1-202ENST00000357348 REC8O95072 547 aa15.27■□□□□ 0.04
RTFDC1-202ENST00000357348 OS9Q13438 667 aaPredicted RBP15.27■□□□□ 0.04
RTFDC1-202ENST00000357348 ZGPATQ8N5A5 531 aaKnown RBP15.27■□□□□ 0.04
RTFDC1-202ENST00000357348 OTUD7AQ8TE49 926 aaPredicted RBP15.27■□□□□ 0.04
RTFDC1-202ENST00000357348 UTP14AQ9BVJ6 771 aaKnown RBP15.27■□□□□ 0.04
RTFDC1-202ENST00000357348 IL1RAPL2Q9NP60 686 aa15.27■□□□□ 0.04
RTFDC1-202ENST00000357348 ZKSCAN5Q9Y2L8 839 aa15.27■□□□□ 0.04
RTFDC1-202ENST00000357348 MTX1Q13505 466 aa15.27■□□□□ 0.03
RTFDC1-202ENST00000357348 CLEC4GQ6UXB4 293 aa15.27■□□□□ 0.03
RTFDC1-202ENST00000357348 CAMKK2Q96RR4 588 aa15.27■□□□□ 0.03
RTFDC1-202ENST00000357348 PRPF40AO75400 957 aaKnown RBP15.26■□□□□ 0.03
RTFDC1-202ENST00000357348 GTF2E1P29083 439 aaPredicted RBP15.26■□□□□ 0.03
RTFDC1-202ENST00000357348 IL17RAQ96F46 866 aa15.26■□□□□ 0.03
RTFDC1-202ENST00000357348 ZNF594Q96JF6 807 aaPredicted RBP15.26■□□□□ 0.03
RTFDC1-202ENST00000357348 MAP7D2Q96T17 732 aa15.26■□□□□ 0.03
RTFDC1-202ENST00000357348 SETDB2Q96T68 719 aa15.26■□□□□ 0.03
RTFDC1-202ENST00000357348 TUBGCP6Q96RT7 1819 aa15.26■□□□□ 0.03
RTFDC1-202ENST00000357348 AKT1S1Q96B36 256 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms