RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 SLU7O95391 586 aaKnown RBP14.26□□□□□ -0.13
SMARCAL1-201ENST00000357276 PSMA5P28066 241 aa14.26□□□□□ -0.13
SMARCAL1-201ENST00000357276 ELF2Q15723 593 aa14.26□□□□□ -0.13
SMARCAL1-201ENST00000357276 CCDC93Q567U6 631 aa14.26□□□□□ -0.13
SMARCAL1-201ENST00000357276 C11orf57Q6ZUT1 292 aaPredicted RBP14.26□□□□□ -0.13
SMARCAL1-201ENST00000357276 SLC26A8Q96RN1 970 aa14.26□□□□□ -0.13
SMARCAL1-201ENST00000357276 ECHDC1Q9NTX5 307 aa14.26□□□□□ -0.13
SMARCAL1-201ENST00000357276 TFIP11Q9UBB9 837 aaKnown RBP14.26□□□□□ -0.13
SMARCAL1-201ENST00000357276 KIF2AO00139 706 aaPredicted RBP14.26□□□□□ -0.13
SMARCAL1-201ENST00000357276 BEND3Q5T5X7 828 aa14.26□□□□□ -0.13
SMARCAL1-201ENST00000357276 EVI5LQ96CN4 794 aa14.26□□□□□ -0.13
SMARCAL1-201ENST00000357276 TIGD1Q96MW7 591 aa14.26□□□□□ -0.13
SMARCAL1-201ENST00000357276 PHAXQ9H814 394 aaKnown RBP14.26□□□□□ -0.13
SMARCAL1-201ENST00000357276 ACEP12821 1306 aa14.26□□□□□ -0.13
SMARCAL1-201ENST00000357276 GOLGA6L4A6NEF3 574 aa14.26□□□□□ -0.13
SMARCAL1-201ENST00000357276 RPS6KB1P23443 525 aa14.26□□□□□ -0.13
SMARCAL1-201ENST00000357276 ZBTB22O15209 634 aa14.25□□□□□ -0.13
SMARCAL1-201ENST00000357276 DHX40Q8IX18 779 aaKnown RBP14.25□□□□□ -0.13
SMARCAL1-201ENST00000357276 EYA1Q99502 592 aa14.25□□□□□ -0.13
SMARCAL1-201ENST00000357276 MED23Q9ULK4 1368 aa14.25□□□□□ -0.13
SMARCAL1-201ENST00000357276 CYP2C19P33261 490 aa14.25□□□□□ -0.13
SMARCAL1-201ENST00000357276 OSBPL5Q9H0X9 879 aaPredicted RBP14.25□□□□□ -0.13
SMARCAL1-201ENST00000357276 RGPD8O14715 1765 aaPredicted RBP14.25□□□□□ -0.13
SMARCAL1-201ENST00000357276 CCDC69A6NI79 296 aa14.25□□□□□ -0.13
SMARCAL1-201ENST00000357276 GNAT3A8MTJ3 354 aa14.25□□□□□ -0.13
SMARCAL1-201ENST00000357276 IL17REQ8NFR9 667 aa14.25□□□□□ -0.13
SMARCAL1-201ENST00000357276 ZNF592Q92610 1267 aa14.25□□□□□ -0.13
SMARCAL1-201ENST00000357276 NECTIN2Q92692 538 aa14.25□□□□□ -0.13
SMARCAL1-201ENST00000357276 FHOD1Q9Y613 1164 aa14.25□□□□□ -0.13
SMARCAL1-201ENST00000357276 CTAGE5O15320 804 aa14.24□□□□□ -0.13
SMARCAL1-201ENST00000357276 ADD1P35611 737 aaKnown RBP14.24□□□□□ -0.13
SMARCAL1-201ENST00000357276 KCNJ6P48051 423 aa14.24□□□□□ -0.13
SMARCAL1-201ENST00000357276 CALCOCO1Q9P1Z2 691 aa14.24□□□□□ -0.13
SMARCAL1-201ENST00000357276 MARF1Q9Y4F3 1742 aaKnown RBP14.24□□□□□ -0.13
SMARCAL1-201ENST00000357276 KCNJ4P48050 445 aa14.24□□□□□ -0.13
SMARCAL1-201ENST00000357276 STX1AQ16623 288 aa14.24□□□□□ -0.13
SMARCAL1-201ENST00000357276 DDX54Q8TDD1 881 aaKnown RBP14.23□□□□□ -0.13
SMARCAL1-201ENST00000357276 ST7Q9NRC1 585 aa14.23□□□□□ -0.13
SMARCAL1-201ENST00000357276 HIP1O00291 1037 aa14.23□□□□□ -0.13
SMARCAL1-201ENST00000357276 SNW1Q13573 536 aaKnown RBP14.23□□□□□ -0.13
SMARCAL1-201ENST00000357276 TAF7Q15545 349 aaPredicted RBP14.23□□□□□ -0.13
SMARCAL1-201ENST00000357276 NBPF11Q86T75 865 aa14.23□□□□□ -0.13
SMARCAL1-201ENST00000357276 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.23□□□□□ -0.13
SMARCAL1-201ENST00000357276 V9GYY5 206 aaPredicted RBP14.23□□□□□ -0.13
SMARCAL1-201ENST00000357276 PIK3C2AO00443 1686 aa14.23□□□□□ -0.13
SMARCAL1-201ENST00000357276 GOLGA6L19H0YKK7 550 aa14.23□□□□□ -0.13
SMARCAL1-201ENST00000357276 PLPPR3Q6T4P5 718 aa14.23□□□□□ -0.13
SMARCAL1-201ENST00000357276 CLASRPQ8N2M8 674 aaKnown RBP14.23□□□□□ -0.13
SMARCAL1-201ENST00000357276 BICD2Q8TD16 824 aa14.23□□□□□ -0.13
SMARCAL1-201ENST00000357276 USP16Q9Y5T5 823 aa14.23□□□□□ -0.13
SMARCAL1-201ENST00000357276 BMS1Q14692 1282 aaKnown RBP14.22□□□□□ -0.13
SMARCAL1-201ENST00000357276 BLOC1S2Q6QNY1 142 aa14.22□□□□□ -0.13
SMARCAL1-201ENST00000357276 FAM227BQ96M60 508 aa14.22□□□□□ -0.13
SMARCAL1-201ENST00000357276 ZSCAN16Q9H4T2 348 aaPredicted RBP14.22□□□□□ -0.13
SMARCAL1-201ENST00000357276 TAF6LQ9Y6J9 622 aa14.22□□□□□ -0.13
SMARCAL1-201ENST00000357276 NMIQ13287 307 aaPredicted RBP14.22□□□□□ -0.13
SMARCAL1-201ENST00000357276 HDGFL1Q5TGJ6 251 aa14.22□□□□□ -0.13
SMARCAL1-201ENST00000357276 E4F1Q66K89 784 aaPredicted RBP14.22□□□□□ -0.13
SMARCAL1-201ENST00000357276 ENGASEQ8NFI3 743 aa14.22□□□□□ -0.13
SMARCAL1-201ENST00000357276 GTF3C6Q969F1 213 aa14.22□□□□□ -0.13
SMARCAL1-201ENST00000357276 IMPACTQ9P2X3 320 aa14.22□□□□□ -0.13
SMARCAL1-201ENST00000357276 ABCC6O95255 1503 aa14.22□□□□□ -0.13
SMARCAL1-201ENST00000357276 GSDMDP57764 484 aa14.21□□□□□ -0.13
SMARCAL1-201ENST00000357276 RCOR1Q9UKL0 485 aa14.21□□□□□ -0.13
SMARCAL1-201ENST00000357276 MRC1P22897 1456 aa14.21□□□□□ -0.13
SMARCAL1-201ENST00000357276 ZRANB2O95218 330 aaKnown RBP eCLIP14.21□□□□□ -0.13
SMARCAL1-201ENST00000357276 CAPN2P17655 700 aa14.21□□□□□ -0.13
SMARCAL1-201ENST00000357276 USPL1Q5W0Q7 1092 aa14.21□□□□□ -0.13
SMARCAL1-201ENST00000357276 HMG20BQ9P0W2 317 aa14.21□□□□□ -0.13
SMARCAL1-201ENST00000357276 CFAP45Q9UL16 551 aa14.21□□□□□ -0.13
SMARCAL1-201ENST00000357276 CEMIPQ8WUJ3 1361 aa14.21□□□□□ -0.13
SMARCAL1-201ENST00000357276 PSDA5PKW4 1024 aaPredicted RBP14.21□□□□□ -0.14
SMARCAL1-201ENST00000357276 TUBB4AP04350 444 aa14.21□□□□□ -0.14
SMARCAL1-201ENST00000357276 HOXB7P09629 217 aa14.2□□□□□ -0.14
SMARCAL1-201ENST00000357276 DNAAF4Q8WXU2 420 aa14.2□□□□□ -0.14
SMARCAL1-201ENST00000357276 GPATCH3Q96I76 525 aa14.2□□□□□ -0.14
SMARCAL1-201ENST00000357276 UBXN6Q9BZV1 441 aa14.2□□□□□ -0.14
SMARCAL1-201ENST00000357276 GOLPH3LQ9H4A5 285 aa14.2□□□□□ -0.14
SMARCAL1-201ENST00000357276 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.2□□□□□ -0.14
SMARCAL1-201ENST00000357276 ERC1Q8IUD2 1116 aa14.2□□□□□ -0.14
SMARCAL1-201ENST00000357276 LAMA4Q16363 1823 aa14.19□□□□□ -0.14
SMARCAL1-201ENST00000357276 KCNA6P17658 529 aa14.19□□□□□ -0.14
SMARCAL1-201ENST00000357276 PLA2G4AP47712 749 aa14.19□□□□□ -0.14
SMARCAL1-201ENST00000357276 CLCN6P51797 869 aa14.19□□□□□ -0.14
SMARCAL1-201ENST00000357276 SMARCC2Q8TAQ2 1214 aa14.19□□□□□ -0.14
SMARCAL1-201ENST00000357276 NOL10Q9BSC4 688 aaKnown RBP14.19□□□□□ -0.14
SMARCAL1-201ENST00000357276 TRMT1Q9NXH9 659 aaKnown RBP14.19□□□□□ -0.14
SMARCAL1-201ENST00000357276 A0A0D9SFI3 127 aa14.19□□□□□ -0.14
SMARCAL1-201ENST00000357276 BRF1Q92994 677 aa14.19□□□□□ -0.14
SMARCAL1-201ENST00000357276 PPP1R13BQ96KQ4 1090 aa14.19□□□□□ -0.14
SMARCAL1-201ENST00000357276 JAK2O60674 1132 aa14.19□□□□□ -0.14
SMARCAL1-201ENST00000357276 PNMA6AP0CW24 399 aaPredicted RBP14.19□□□□□ -0.14
SMARCAL1-201ENST00000357276 ERCC6LQ2NKX8 1250 aa14.19□□□□□ -0.14
SMARCAL1-201ENST00000357276 LRRN4CLQ8ND94 238 aa14.19□□□□□ -0.14
SMARCAL1-201ENST00000357276 TCEANC2Q96MN5 208 aa14.18□□□□□ -0.14
SMARCAL1-201ENST00000357276 DNAJC2Q99543 621 aaKnown RBP14.18□□□□□ -0.14
SMARCAL1-201ENST00000357276 ANO10Q9NW15 660 aa14.18□□□□□ -0.14
SMARCAL1-201ENST00000357276 BPIFA3Q9BQP9 254 aa14.18□□□□□ -0.14
SMARCAL1-201ENST00000357276 IFIT2P09913 472 aaKnown RBP14.17□□□□□ -0.14
SMARCAL1-201ENST00000357276 FILIP1Q7Z7B0 1213 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms