RNA–Protein interactions for RNA: ENST00000357089.8

UBXN11-202, Transcript of UBX domain protein 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene UBXN11, Length 1,555 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-202ENST00000357089 SRGAP3O43295 1099 aa18.32■□□□□ 0.52
UBXN11-202ENST00000357089 CSF1RP07333 972 aa18.32■□□□□ 0.52
UBXN11-202ENST00000357089 ATP8B2P98198 1209 aa18.32■□□□□ 0.52
UBXN11-202ENST00000357089 RIC1Q4ADV7 1423 aa18.32■□□□□ 0.52
UBXN11-202ENST00000357089 MTX1Q13505 466 aa18.31■□□□□ 0.52
UBXN11-202ENST00000357089 CCDC152Q4G0S7 254 aa18.31■□□□□ 0.52
UBXN11-202ENST00000357089 SIRT2Q8IXJ6 389 aa18.31■□□□□ 0.52
UBXN11-202ENST00000357089 GREM2Q9H772 168 aa18.31■□□□□ 0.52
UBXN11-202ENST00000357089 SF3B3Q15393 1217 aaKnown RBP18.3■□□□□ 0.52
UBXN11-202ENST00000357089 FAM161AQ3B820 660 aa18.3■□□□□ 0.52
UBXN11-202ENST00000357089 PDE6BP35913 854 aa18.3■□□□□ 0.52
UBXN11-202ENST00000357089 MYH3P11055 1940 aa18.29■□□□□ 0.52
UBXN11-202ENST00000357089 C10orf71Q711Q0 1435 aa18.29■□□□□ 0.52
UBXN11-202ENST00000357089 ITGA6P23229 1130 aa18.29■□□□□ 0.52
UBXN11-202ENST00000357089 CCDC57Q2TAC2 916 aa18.29■□□□□ 0.52
UBXN11-202ENST00000357089 ANKRD31Q8N7Z5 1873 aa18.28■□□□□ 0.52
UBXN11-202ENST00000357089 KLRG2A4D1S0 409 aaPredicted RBP18.28■□□□□ 0.52
UBXN11-202ENST00000357089 HMMRO75330 724 aa18.28■□□□□ 0.52
UBXN11-202ENST00000357089 IFIT5Q13325 482 aaKnown RBP18.28■□□□□ 0.52
UBXN11-202ENST00000357089 SSH3Q8TE77 659 aa18.28■□□□□ 0.52
UBXN11-202ENST00000357089 PPP1R1BQ9UD71 204 aaPredicted RBP18.28■□□□□ 0.52
UBXN11-202ENST00000357089 ANKRD18BA2A2Z9 1011 aa18.27■□□□□ 0.52
UBXN11-202ENST00000357089 POLA2Q14181 598 aa18.27■□□□□ 0.52
UBXN11-202ENST00000357089 CRY2Q49AN0 593 aa18.27■□□□□ 0.52
UBXN11-202ENST00000357089 KLHDC4Q8TBB5 520 aa18.27■□□□□ 0.52
UBXN11-202ENST00000357089 RPGRQ92834 1020 aaKnown RBP18.27■□□□□ 0.52
UBXN11-202ENST00000357089 SEC31BQ9NQW1 1179 aa18.27■□□□□ 0.52
UBXN11-202ENST00000357089 PPP4R2Q9NY27 417 aa18.27■□□□□ 0.52
UBXN11-202ENST00000357089 DDX46Q7L014 1031 aaKnown RBP18.26■□□□□ 0.51
UBXN11-202ENST00000357089 KLHL34Q8N239 644 aa18.26■□□□□ 0.51
UBXN11-202ENST00000357089 RWDD1Q9H446 243 aaPredicted RBP18.26■□□□□ 0.51
UBXN11-202ENST00000357089 RTL9Q8NET4 1388 aa18.26■□□□□ 0.51
UBXN11-202ENST00000357089 IGHDP01880 384 aa18.25■□□□□ 0.51
UBXN11-202ENST00000357089 RFX5P48382 616 aaPredicted RBP18.25■□□□□ 0.51
UBXN11-202ENST00000357089 HDAC1Q13547 482 aaPredicted RBP18.25■□□□□ 0.51
UBXN11-202ENST00000357089 TAF7LQ5H9L4 462 aa18.25■□□□□ 0.51
UBXN11-202ENST00000357089 C2CD5Q86YS7 1000 aa18.25■□□□□ 0.51
UBXN11-202ENST00000357089 ZNF594Q96JF6 807 aaPredicted RBP18.25■□□□□ 0.51
UBXN11-202ENST00000357089 CCDC136Q96JN2 1154 aa18.25■□□□□ 0.51
UBXN11-202ENST00000357089 PA2G4Q9UQ80 394 aaKnown RBP18.25■□□□□ 0.51
UBXN11-202ENST00000357089 H0YIN7 160 aa18.25■□□□□ 0.51
UBXN11-202ENST00000357089 SRGNP10124 158 aa18.25■□□□□ 0.51
UBXN11-202ENST00000357089 CHRNA5P30532 468 aa18.25■□□□□ 0.51
UBXN11-202ENST00000357089 PTPN12Q05209 780 aaKnown RBP18.25■□□□□ 0.51
UBXN11-202ENST00000357089 B4GALNT3Q6L9W6 998 aa18.25■□□□□ 0.51
UBXN11-202ENST00000357089 PELP1Q8IZL8 1130 aaKnown RBP18.25■□□□□ 0.51
UBXN11-202ENST00000357089 RBM17Q96I25 401 aaKnown RBP18.25■□□□□ 0.51
UBXN11-202ENST00000357089 SIL1Q9H173 461 aa18.24■□□□□ 0.51
UBXN11-202ENST00000357089 NPR1P16066 1061 aa18.23■□□□□ 0.51
UBXN11-202ENST00000357089 ZNF622Q969S3 477 aaKnown RBP eCLIP18.23■□□□□ 0.51
UBXN11-202ENST00000357089 MASTLQ96GX5 879 aa18.23■□□□□ 0.51
UBXN11-202ENST00000357089 CDC5LQ99459 802 aaKnown RBP18.23■□□□□ 0.51
UBXN11-202ENST00000357089 COL11A2P13942 1736 aaPredicted RBP18.23■□□□□ 0.51
UBXN11-202ENST00000357089 SURF6O75683 361 aaKnown RBP18.22■□□□□ 0.51
UBXN11-202ENST00000357089 HOXA10P31260 410 aaPredicted RBP18.22■□□□□ 0.51
UBXN11-202ENST00000357089 ANKRD18AQ8IVF6 992 aa18.22■□□□□ 0.51
UBXN11-202ENST00000357089 CELF1Q92879 486 aaKnown RBP18.22■□□□□ 0.51
UBXN11-202ENST00000357089 COPRSQ9NQ92 184 aa18.22■□□□□ 0.51
UBXN11-202ENST00000357089 PDZRN3Q9UPQ7 1066 aa18.22■□□□□ 0.51
UBXN11-202ENST00000357089 EXOC6BQ9Y2D4 811 aa18.22■□□□□ 0.51
UBXN11-202ENST00000357089 CD2APQ9Y5K6 639 aa18.22■□□□□ 0.51
UBXN11-202ENST00000357089 KIF13BQ9NQT8 1826 aa18.22■□□□□ 0.51
UBXN11-202ENST00000357089 COL4A1P02462 1669 aa18.22■□□□□ 0.51
UBXN11-202ENST00000357089 A0A0G2JLW4 131 aa18.21■□□□□ 0.51
UBXN11-202ENST00000357089 IGHMBP2P38935 993 aaKnown RBP18.21■□□□□ 0.51
UBXN11-202ENST00000357089 TGFB2P61812 414 aa18.21■□□□□ 0.51
UBXN11-202ENST00000357089 GRAPQ13588 217 aa18.21■□□□□ 0.51
UBXN11-202ENST00000357089 LDHAL6AQ6ZMR3 332 aa18.21■□□□□ 0.51
UBXN11-202ENST00000357089 GRAPLQ8TC17 118 aaPredicted RBP18.21■□□□□ 0.51
UBXN11-202ENST00000357089 MPHOSPH8Q99549 860 aa18.21■□□□□ 0.51
UBXN11-202ENST00000357089 DCAF8L1A6NGE4 600 aa18.21■□□□□ 0.51
UBXN11-202ENST00000357089 DPEP1P16444 411 aa18.21■□□□□ 0.51
UBXN11-202ENST00000357089 RPS8P62241 208 aaKnown RBP18.21■□□□□ 0.51
UBXN11-202ENST00000357089 CRAMP1Q96RY5 1269 aa18.21■□□□□ 0.51
UBXN11-202ENST00000357089 PUS3Q9BZE2 481 aaKnown RBP18.21■□□□□ 0.51
UBXN11-202ENST00000357089 ALDH1B1P30837 517 aa18.2■□□□□ 0.5
UBXN11-202ENST00000357089 G3BP1Q13283 466 aaKnown RBP eCLIP18.2■□□□□ 0.5
UBXN11-202ENST00000357089 OS9Q13438 667 aaPredicted RBP18.2■□□□□ 0.5
UBXN11-202ENST00000357089 LRRC24Q50LG9 513 aa18.2■□□□□ 0.5
UBXN11-202ENST00000357089 STYK1Q6J9G0 422 aa18.2■□□□□ 0.5
UBXN11-202ENST00000357089 DCTPP1Q9H773 170 aa18.2■□□□□ 0.5
UBXN11-202ENST00000357089 CNNM1Q9NRU3 951 aa18.2■□□□□ 0.5
UBXN11-202ENST00000357089 TAF1P21675 1872 aa18.19■□□□□ 0.5
UBXN11-202ENST00000357089 APBB1O00213 710 aa18.19■□□□□ 0.5
UBXN11-202ENST00000357089 NOP58Q9Y2X3 529 aaKnown RBP18.19■□□□□ 0.5
UBXN11-202ENST00000357089 EYA2O00167 538 aa18.18■□□□□ 0.5
UBXN11-202ENST00000357089 KCNA3P22001 575 aa18.18■□□□□ 0.5
UBXN11-202ENST00000357089 HSP90AB4PQ58FF6 505 aa18.18■□□□□ 0.5
UBXN11-202ENST00000357089 GCC1Q96CN9 775 aa18.18■□□□□ 0.5
UBXN11-202ENST00000357089 FHDC1Q9C0D6 1143 aaPredicted RBP18.18■□□□□ 0.5
UBXN11-202ENST00000357089 BBOX1O75936 387 aa18.17■□□□□ 0.5
UBXN11-202ENST00000357089 BSDC1Q9NW68 430 aaPredicted RBP18.17■□□□□ 0.5
UBXN11-202ENST00000357089 PPEF1O14829 653 aaPredicted RBP18.17■□□□□ 0.5
UBXN11-202ENST00000357089 CIAO1O76071 339 aa18.17■□□□□ 0.5
UBXN11-202ENST00000357089 ATG9AQ7Z3C6 839 aa18.17■□□□□ 0.5
UBXN11-202ENST00000357089 NLGN2Q8NFZ4 835 aa18.17■□□□□ 0.5
UBXN11-202ENST00000357089 KDM2BQ8NHM5 1336 aa18.17■□□□□ 0.5
UBXN11-202ENST00000357089 CNKSR1Q969H4 720 aa18.17■□□□□ 0.5
UBXN11-202ENST00000357089 SPEF2Q9C093 1822 aa18.17■□□□□ 0.5
UBXN11-202ENST00000357089 FBXO3Q9UK99 471 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms