RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 PIM2Q9P1W9 311 aa20.08■□□□□ 0.81
FDPS-201ENST00000356657 WWC3Q9ULE0 1092 aa20.08■□□□□ 0.81
FDPS-201ENST00000356657 ARFGEF1Q9Y6D6 1849 aa20.07■□□□□ 0.8
FDPS-201ENST00000356657 DPEP1P16444 411 aa20.07■□□□□ 0.8
FDPS-201ENST00000356657 PANK1Q8TE04 598 aa20.07■□□□□ 0.8
FDPS-201ENST00000356657 RBM17Q96I25 401 aaKnown RBP20.07■□□□□ 0.8
FDPS-201ENST00000356657 CRAMP1Q96RY5 1269 aa20.07■□□□□ 0.8
FDPS-201ENST00000356657 TNNQ9UQP3 1299 aa20.07■□□□□ 0.8
FDPS-201ENST00000356657 DDX46Q7L014 1031 aaKnown RBP20.06■□□□□ 0.8
FDPS-201ENST00000356657 TMC4Q7Z404 712 aa20.06■□□□□ 0.8
FDPS-201ENST00000356657 CSF1RP07333 972 aa20.05■□□□□ 0.8
FDPS-201ENST00000356657 RABL6Q3YEC7 729 aaPredicted RBP20.05■□□□□ 0.8
FDPS-201ENST00000356657 TTLL11Q8NHH1 800 aa20.05■□□□□ 0.8
FDPS-201ENST00000356657 MEIS3Q99687 375 aa20.05■□□□□ 0.8
FDPS-201ENST00000356657 GOLGB1Q14789 3259 aaKnown RBP20.05■□□□□ 0.8
FDPS-201ENST00000356657 A0A0G2JLW4 131 aa20.05■□□□□ 0.8
FDPS-201ENST00000356657 KCNA3P22001 575 aa20.05■□□□□ 0.8
FDPS-201ENST00000356657 CHRNA5P30532 468 aa20.05■□□□□ 0.8
FDPS-201ENST00000356657 TTLL6Q8N841 843 aa20.05■□□□□ 0.8
FDPS-201ENST00000356657 UTRNP46939 3433 aa20.04■□□□□ 0.8
FDPS-201ENST00000356657 ZBTB7BO15156 539 aaPredicted RBP20.04■□□□□ 0.8
FDPS-201ENST00000356657 GNAI2P04899 355 aa20.04■□□□□ 0.8
FDPS-201ENST00000356657 FOXO4P98177 505 aa20.04■□□□□ 0.8
FDPS-201ENST00000356657 AAMPQ13685 434 aa20.04■□□□□ 0.8
FDPS-201ENST00000356657 SUCLG2Q96I99 432 aa20.04■□□□□ 0.8
FDPS-201ENST00000356657 CDC5LQ99459 802 aaKnown RBP20.04■□□□□ 0.8
FDPS-201ENST00000356657 CACNA1SQ13698 1873 aa20.03■□□□□ 0.8
FDPS-201ENST00000356657 DALRD3Q5D0E6 543 aaKnown RBP20.03■□□□□ 0.8
FDPS-201ENST00000356657 SOGA3Q5TF21 947 aa20.03■□□□□ 0.8
FDPS-201ENST00000356657 C3orf67Q6ZVT6 689 aa20.03■□□□□ 0.8
FDPS-201ENST00000356657 JARID2Q92833 1246 aaPredicted RBP20.03■□□□□ 0.8
FDPS-201ENST00000356657 ZNF622Q969S3 477 aaKnown RBP eCLIP20.03■□□□□ 0.87e-15■□□□□ 9.1
FDPS-201ENST00000356657 COG6Q9Y2V7 657 aa20.03■□□□□ 0.8
FDPS-201ENST00000356657 BBOX1O75936 387 aa20.02■□□□□ 0.8
FDPS-201ENST00000356657 GRAPQ13588 217 aa20.02■□□□□ 0.8
FDPS-201ENST00000356657 GRIPAP1Q4V328 841 aa20.02■□□□□ 0.8
FDPS-201ENST00000356657 GRAPLQ8TC17 118 aaPredicted RBP20.02■□□□□ 0.8
FDPS-201ENST00000356657 SUPT16HQ9Y5B9 1047 aaKnown RBP20.02■□□□□ 0.8
FDPS-201ENST00000356657 CHD4Q14839 1912 aa20.02■□□□□ 0.79
FDPS-201ENST00000356657 YBX3P16989 372 aaKnown RBP eCLIP20.01■□□□□ 0.79
FDPS-201ENST00000356657 YY1P25490 414 aa20.01■□□□□ 0.79
FDPS-201ENST00000356657 MTX1Q13505 466 aa20.01■□□□□ 0.79
FDPS-201ENST00000356657 CC2D2BQ6DHV5 1058 aa20.01■□□□□ 0.79
FDPS-201ENST00000356657 LMBR1LQ6UX01 489 aa20.01■□□□□ 0.79
FDPS-201ENST00000356657 KAZALD1Q96I82 304 aa20.01■□□□□ 0.79
FDPS-201ENST00000356657 BICC1Q9H694 974 aaKnown RBP20.01■□□□□ 0.79
FDPS-201ENST00000356657 GRIN3BO60391 1043 aa20■□□□□ 0.79
FDPS-201ENST00000356657 IFIT5Q13325 482 aaKnown RBP20■□□□□ 0.79
FDPS-201ENST00000356657 CCDC57Q2TAC2 916 aa20■□□□□ 0.79
FDPS-201ENST00000356657 C20orf194Q5TEA3 1177 aa20■□□□□ 0.79
FDPS-201ENST00000356657 PRPF40BQ6NWY9 871 aaKnown RBP20■□□□□ 0.79
FDPS-201ENST00000356657 LRRFIP2Q9Y608 721 aaKnown RBP20■□□□□ 0.79
FDPS-201ENST00000356657 SLX4Q8IY92 1834 aa20■□□□□ 0.79
FDPS-201ENST00000356657 LRRC37AA6NMS7 1700 aa20■□□□□ 0.79
FDPS-201ENST00000356657 ANKRD18BA2A2Z9 1011 aa19.99■□□□□ 0.79
FDPS-201ENST00000356657 TMX4Q9H1E5 349 aaPredicted RBP19.99■□□□□ 0.79
FDPS-201ENST00000356657 GREM2Q9H772 168 aa19.99■□□□□ 0.79
FDPS-201ENST00000356657 ZBTB40Q9NUA8 1239 aa19.99■□□□□ 0.79
FDPS-201ENST00000356657 ITGA6P23229 1130 aa19.99■□□□□ 0.79
FDPS-201ENST00000356657 FAM161AQ3B820 660 aa19.99■□□□□ 0.79
FDPS-201ENST00000356657 ANKRD44Q8N8A2 993 aa19.99■□□□□ 0.79
FDPS-201ENST00000356657 RPS8P62241 208 aaKnown RBP19.98■□□□□ 0.79
FDPS-201ENST00000356657 EPHA10Q5JZY3 1008 aa19.98■□□□□ 0.79
FDPS-201ENST00000356657 ANKRD18AQ8IVF6 992 aa19.98■□□□□ 0.79
FDPS-201ENST00000356657 BCS1LQ9Y276 419 aa19.98■□□□□ 0.79
FDPS-201ENST00000356657 CHMP3Q9Y3E7 222 aa19.98■□□□□ 0.79
FDPS-201ENST00000356657 IGHMBP2P38935 993 aaKnown RBP19.97■□□□□ 0.79
FDPS-201ENST00000356657 TAF1P21675 1872 aa19.97■□□□□ 0.79
FDPS-201ENST00000356657 PPEF1O14829 653 aaPredicted RBP19.96■□□□□ 0.79
FDPS-201ENST00000356657 FBXO3Q9UK99 471 aa19.96■□□□□ 0.79
FDPS-201ENST00000356657 TAF7LQ5H9L4 462 aa19.95■□□□□ 0.78
FDPS-201ENST00000356657 SP8Q8IXZ3 490 aa19.95■□□□□ 0.78
FDPS-201ENST00000356657 BSDC1Q9NW68 430 aaPredicted RBP19.95■□□□□ 0.78
FDPS-201ENST00000356657 ATP6V0A2Q9Y487 856 aa19.95■□□□□ 0.78
FDPS-201ENST00000356657 SPEF2Q9C093 1822 aa19.95■□□□□ 0.78
FDPS-201ENST00000356657 FER1L6Q2WGJ9 1857 aa19.94■□□□□ 0.78
FDPS-201ENST00000356657 RPAP2Q8IXW5 612 aaPredicted RBP19.94■□□□□ 0.78
FDPS-201ENST00000356657 C7orf43Q8WVR3 580 aa19.94■□□□□ 0.78
FDPS-201ENST00000356657 CELF1Q92879 486 aaKnown RBP19.94■□□□□ 0.78
FDPS-201ENST00000356657 CCDC85AQ96PX6 553 aaPredicted RBP19.94■□□□□ 0.78
FDPS-201ENST00000356657 MPHOSPH8Q99549 860 aa19.94■□□□□ 0.78
FDPS-201ENST00000356657 SEC31BQ9NQW1 1179 aa19.94■□□□□ 0.78
FDPS-201ENST00000356657 CCDC93Q567U6 631 aa19.93■□□□□ 0.78
FDPS-201ENST00000356657 RTKN2Q8IZC4 609 aa19.93■□□□□ 0.78
FDPS-201ENST00000356657 SRGAP3O43295 1099 aa19.92■□□□□ 0.78
FDPS-201ENST00000356657 HMMRO75330 724 aa19.92■□□□□ 0.78
FDPS-201ENST00000356657 LTBP3Q9NS15 1303 aa19.91■□□□□ 0.78
FDPS-201ENST00000356657 ATP8B2P98198 1209 aa19.91■□□□□ 0.78
FDPS-201ENST00000356657 CEP85Q6P2H3 762 aa19.91■□□□□ 0.78
FDPS-201ENST00000356657 SSH3Q8TE77 659 aa19.91■□□□□ 0.78
FDPS-201ENST00000356657 CRBNQ96SW2 442 aa19.91■□□□□ 0.78
FDPS-201ENST00000356657 COPRSQ9NQ92 184 aa19.91■□□□□ 0.78
FDPS-201ENST00000356657 SNED1Q8TER0 1413 aa19.9■□□□□ 0.78
FDPS-201ENST00000356657 C21orf2O43822 256 aa19.9■□□□□ 0.78
FDPS-201ENST00000356657 LDHAL6AQ6ZMR3 332 aa19.9■□□□□ 0.78
FDPS-201ENST00000356657 ANKRD2Q9GZV1 360 aa19.9■□□□□ 0.78
FDPS-201ENST00000356657 LTBP1Q14766 1721 aa19.9■□□□□ 0.78
FDPS-201ENST00000356657 COL4A1P02462 1669 aa19.89■□□□□ 0.77
FDPS-201ENST00000356657 CIAO1O76071 339 aa19.89■□□□□ 0.77
FDPS-201ENST00000356657 RFX5P48382 616 aaPredicted RBP19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms