RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 SLU7O95391 586 aaKnown RBP6.35□□□□□ -1.39
PTPRD-202ENST00000356435 MSANTD4Q8NCY6 345 aa6.35□□□□□ -1.39
PTPRD-202ENST00000356435 PPP1R14CQ8TAE6 165 aa6.35□□□□□ -1.39
PTPRD-202ENST00000356435 UNC13AQ9UPW8 1703 aa6.35□□□□□ -1.39
PTPRD-202ENST00000356435 TNNT1P13805 278 aa6.35□□□□□ -1.39
PTPRD-202ENST00000356435 NSD2O96028 1365 aa6.34□□□□□ -1.39
PTPRD-202ENST00000356435 KRT13P13646 458 aa6.34□□□□□ -1.39
PTPRD-202ENST00000356435 CAMK4Q16566 473 aa6.34□□□□□ -1.39
PTPRD-202ENST00000356435 C6orf163Q5TEZ5 329 aa6.34□□□□□ -1.39
PTPRD-202ENST00000356435 BIN2Q9UBW5 565 aaPredicted RBP6.34□□□□□ -1.39
PTPRD-202ENST00000356435 STX6O43752 255 aa6.34□□□□□ -1.39
PTPRD-202ENST00000356435 ZNF500O60304 480 aaPredicted RBP6.34□□□□□ -1.39
PTPRD-202ENST00000356435 PHACTR2O75167 634 aa6.34□□□□□ -1.39
PTPRD-202ENST00000356435 NOP2P46087 812 aaKnown RBP6.34□□□□□ -1.39
PTPRD-202ENST00000356435 SMARCC2Q8TAQ2 1214 aa6.34□□□□□ -1.39
PTPRD-202ENST00000356435 PIK3R4Q99570 1358 aa6.34□□□□□ -1.39
PTPRD-202ENST00000356435 PAFAH1B1P43034 410 aa6.34□□□□□ -1.39
PTPRD-202ENST00000356435 TMEM67Q5HYA8 995 aa6.34□□□□□ -1.39
PTPRD-202ENST00000356435 UBAP1LF5GYI3 381 aa6.34□□□□□ -1.39
PTPRD-202ENST00000356435 MICALCLQ6ZW33 695 aa6.34□□□□□ -1.39
PTPRD-202ENST00000356435 UBXN4Q92575 508 aa6.34□□□□□ -1.39
PTPRD-202ENST00000356435 NYXQ9GZU5 481 aa6.34□□□□□ -1.39
PTPRD-202ENST00000356435 ZBTB3Q9H5J0 574 aa6.34□□□□□ -1.39
PTPRD-202ENST00000356435 RASAL2Q9UJF2 1139 aa6.34□□□□□ -1.39
PTPRD-202ENST00000356435 KANK3Q6NY19 840 aa6.34□□□□□ -1.39
PTPRD-202ENST00000356435 CNNM3Q8NE01 707 aa6.34□□□□□ -1.39
PTPRD-202ENST00000356435 KRT23Q9C075 422 aa6.34□□□□□ -1.39
PTPRD-202ENST00000356435 GPATCH8Q9UKJ3 1502 aaKnown RBP6.34□□□□□ -1.39
PTPRD-202ENST00000356435 BMP15O95972 392 aa6.34□□□□□ -1.4
PTPRD-202ENST00000356435 GPTP24298 496 aa6.34□□□□□ -1.4
PTPRD-202ENST00000356435 ARL1P40616 181 aaPredicted RBP6.34□□□□□ -1.4
PTPRD-202ENST00000356435 NBPF1Q3BBV0 1214 aa6.34□□□□□ -1.4
PTPRD-202ENST00000356435 GIMAP7Q8NHV1 300 aa6.34□□□□□ -1.4
PTPRD-202ENST00000356435 EVI5LQ96CN4 794 aa6.34□□□□□ -1.4
PTPRD-202ENST00000356435 BEGAINQ9BUH8 593 aa6.34□□□□□ -1.4
PTPRD-202ENST00000356435 PLS1Q14651 629 aa6.34□□□□□ -1.4
PTPRD-202ENST00000356435 CLEC17AQ6ZS10 378 aa6.34□□□□□ -1.4
PTPRD-202ENST00000356435 CADPS2Q86UW7 1296 aa6.34□□□□□ -1.4
PTPRD-202ENST00000356435 PDCL2Q8N4E4 241 aa6.34□□□□□ -1.4
PTPRD-202ENST00000356435 BOLA2Q9H3K6 86 aa6.34□□□□□ -1.4
PTPRD-202ENST00000356435 MIS18AQ9NYP9 233 aa6.34□□□□□ -1.4
PTPRD-202ENST00000356435 USP19O94966 1318 aa6.33□□□□□ -1.4
PTPRD-202ENST00000356435 IDEP14735 1019 aa6.33□□□□□ -1.4
PTPRD-202ENST00000356435 BMP2KLQ5H9B9 411 aa6.33□□□□□ -1.4
PTPRD-202ENST00000356435 FILIP1Q7Z7B0 1213 aa6.33□□□□□ -1.4
PTPRD-202ENST00000356435 EXOC6BQ9Y2D4 811 aa6.33□□□□□ -1.4
PTPRD-202ENST00000356435 PRPHP41219 470 aa6.33□□□□□ -1.4
PTPRD-202ENST00000356435 RAB3GAP1Q15042 981 aa6.33□□□□□ -1.4
PTPRD-202ENST00000356435 PTPRCP08575 1304 aa6.33□□□□□ -1.4
PTPRD-202ENST00000356435 PLCG2P16885 1265 aa6.33□□□□□ -1.4
PTPRD-202ENST00000356435 SETDB2Q96T68 719 aa6.33□□□□□ -1.4
PTPRD-202ENST00000356435 EYA3Q99504 573 aa6.33□□□□□ -1.4
PTPRD-202ENST00000356435 GTPBP4Q9BZE4 634 aaKnown RBP6.33□□□□□ -1.4
PTPRD-202ENST00000356435 ATP10AO60312 1499 aa6.33□□□□□ -1.4
PTPRD-202ENST00000356435 ATP6V1AP38606 617 aa6.33□□□□□ -1.4
PTPRD-202ENST00000356435 METAP2P50579 478 aaKnown RBP eCLIP6.33□□□□□ -1.4
PTPRD-202ENST00000356435 CCDC82Q8N4S0 544 aa6.33□□□□□ -1.4
PTPRD-202ENST00000356435 NCOA7Q8NI08 942 aa6.33□□□□□ -1.4
PTPRD-202ENST00000356435 IQCGQ9H095 443 aaKnown RBP6.33□□□□□ -1.4
PTPRD-202ENST00000356435 NDC80O14777 642 aa6.33□□□□□ -1.4
PTPRD-202ENST00000356435 CCDC175P0C221 793 aa6.33□□□□□ -1.4
PTPRD-202ENST00000356435 DNA2P51530 1060 aa6.33□□□□□ -1.4
PTPRD-202ENST00000356435 SPECC1LQ69YQ0 1117 aa6.33□□□□□ -1.4
PTPRD-202ENST00000356435 HMG20BQ9P0W2 317 aa6.33□□□□□ -1.4
PTPRD-202ENST00000356435 MAGI3Q5TCQ9 1506 aa6.33□□□□□ -1.4
PTPRD-202ENST00000356435 TMCO5BA8MYB1 307 aa6.33□□□□□ -1.4
PTPRD-202ENST00000356435 CCDC183Q5T5S1 534 aa6.33□□□□□ -1.4
PTPRD-202ENST00000356435 AMOTL2Q9Y2J4 779 aa6.33□□□□□ -1.4
PTPRD-202ENST00000356435 RTL9Q8NET4 1388 aa6.33□□□□□ -1.4
PTPRD-202ENST00000356435 IARSP41252 1262 aaKnown RBP6.33□□□□□ -1.4
PTPRD-202ENST00000356435 KRT28Q7Z3Y7 464 aa6.33□□□□□ -1.4
PTPRD-202ENST00000356435 SH2D4AQ9H788 454 aa6.33□□□□□ -1.4
PTPRD-202ENST00000356435 VEZTQ9HBM0 779 aa6.33□□□□□ -1.4
PTPRD-202ENST00000356435 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.33□□□□□ -1.4
PTPRD-202ENST00000356435 TMPOP42166 694 aaKnown RBP6.32□□□□□ -1.4
PTPRD-202ENST00000356435 TNNI2P48788 182 aa6.32□□□□□ -1.4
PTPRD-202ENST00000356435 STX1AQ16623 288 aa6.32□□□□□ -1.4
PTPRD-202ENST00000356435 CEP112Q8N8E3 955 aa6.32□□□□□ -1.4
PTPRD-202ENST00000356435 CNNM2Q9H8M5 875 aa6.32□□□□□ -1.4
PTPRD-202ENST00000356435 ZKSCAN5Q9Y2L8 839 aa6.32□□□□□ -1.4
PTPRD-202ENST00000356435 MAGI1Q96QZ7 1491 aaPredicted RBP6.32□□□□□ -1.4
PTPRD-202ENST00000356435 CDK13Q14004 1512 aaKnown RBP6.32□□□□□ -1.4
PTPRD-202ENST00000356435 POLR1AO95602 1720 aaPredicted RBP6.32□□□□□ -1.4
PTPRD-202ENST00000356435 KIAA1524Q8TCG1 905 aa6.32□□□□□ -1.4
PTPRD-202ENST00000356435 VAT1LQ9HCJ6 419 aa6.32□□□□□ -1.4
PTPRD-202ENST00000356435 SCAF11Q99590 1463 aaKnown RBP6.32□□□□□ -1.4
PTPRD-202ENST00000356435 PRPF4BQ13523 1007 aaKnown RBP6.32□□□□□ -1.4
PTPRD-202ENST00000356435 TTC16Q8NEE8 873 aa6.32□□□□□ -1.4
PTPRD-202ENST00000356435 NUP153P49790 1475 aaKnown RBP6.32□□□□□ -1.4
PTPRD-202ENST00000356435 LPXNO60711 386 aa6.32□□□□□ -1.4
PTPRD-202ENST00000356435 RARSP54136 660 aaKnown RBP6.32□□□□□ -1.4
PTPRD-202ENST00000356435 ZNF445P59923 1031 aa6.32□□□□□ -1.4
PTPRD-202ENST00000356435 C6orf50Q9HD87 102 aa6.32□□□□□ -1.4
PTPRD-202ENST00000356435 MAP3K2Q9Y2U5 619 aa6.32□□□□□ -1.4
PTPRD-202ENST00000356435 SNRPA1P09661 255 aaKnown RBP6.32□□□□□ -1.4
PTPRD-202ENST00000356435 BRDTQ58F21 947 aaPredicted RBP6.32□□□□□ -1.4
PTPRD-202ENST00000356435 TNPO1Q92973 898 aaKnown RBP6.32□□□□□ -1.4
PTPRD-202ENST00000356435 ASXL1Q8IXJ9 1541 aa6.32□□□□□ -1.4
PTPRD-202ENST00000356435 WASLO00401 505 aaPredicted RBP6.32□□□□□ -1.4
PTPRD-202ENST00000356435 UBA7P41226 1012 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms