RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 LRRC8AQ8IWT6 810 aa15.96■□□□□ 0.15
TRIM4-203ENST00000355947 LRRC59Q96AG4 307 aaKnown RBP15.96■□□□□ 0.15
TRIM4-203ENST00000355947 PAXBP1Q9Y5B6 917 aa15.96■□□□□ 0.15
TRIM4-203ENST00000355947 ARHGAP31Q2M1Z3 1444 aa15.96■□□□□ 0.15
TRIM4-203ENST00000355947 LMOD1P29536 600 aaPredicted RBP15.96■□□□□ 0.15
TRIM4-203ENST00000355947 APOBRQ0VD83 1088 aa15.96■□□□□ 0.15
TRIM4-203ENST00000355947 CRB1P82279 1406 aa15.96■□□□□ 0.15
TRIM4-203ENST00000355947 SNW1Q13573 536 aaKnown RBP15.96■□□□□ 0.15
TRIM4-203ENST00000355947 MNS1Q8NEH6 495 aa15.96■□□□□ 0.15
TRIM4-203ENST00000355947 EPC1Q9H2F5 836 aa15.96■□□□□ 0.15
TRIM4-203ENST00000355947 ZNF330Q9Y3S2 320 aaPredicted RBP15.96■□□□□ 0.15
TRIM4-203ENST00000355947 ATP7BP35670 1465 aa15.96■□□□□ 0.14
TRIM4-203ENST00000355947 URI1O94763 535 aaPredicted RBP15.95■□□□□ 0.14
TRIM4-203ENST00000355947 PDILTQ8N807 584 aa15.95■□□□□ 0.14
TRIM4-203ENST00000355947 DNAI1Q9UI46 699 aa15.95■□□□□ 0.14
TRIM4-203ENST00000355947 DLG5Q8TDM6 1919 aa15.95■□□□□ 0.14
TRIM4-203ENST00000355947 LRRN4CLQ8ND94 238 aa15.95■□□□□ 0.14
TRIM4-203ENST00000355947 BICC1Q9H694 974 aaKnown RBP15.95■□□□□ 0.14
TRIM4-203ENST00000355947 IFNKQ9P0W0 207 aa15.95■□□□□ 0.14
TRIM4-203ENST00000355947 RPS6KB1P23443 525 aa15.94■□□□□ 0.14
TRIM4-203ENST00000355947 HAND2P61296 217 aa15.94■□□□□ 0.14
TRIM4-203ENST00000355947 NECTIN1Q15223 517 aa15.94■□□□□ 0.14
TRIM4-203ENST00000355947 CEP57L1Q8IYX8 460 aa15.94■□□□□ 0.14
TRIM4-203ENST00000355947 ZNF397Q8NF99 534 aaPredicted RBP15.94■□□□□ 0.14
TRIM4-203ENST00000355947 CTIFO43310 598 aaKnown RBP15.94■□□□□ 0.14
TRIM4-203ENST00000355947 ARHGAP29Q52LW3 1261 aa15.94■□□□□ 0.14
TRIM4-203ENST00000355947 NEK1Q96PY6 1258 aa15.94■□□□□ 0.14
TRIM4-203ENST00000355947 AATKQ6ZMQ8 1374 aa15.94■□□□□ 0.14
TRIM4-203ENST00000355947 STK38Q15208 465 aa15.93■□□□□ 0.14
TRIM4-203ENST00000355947 DDX41Q9UJV9 622 aaKnown RBP15.93■□□□□ 0.14
TRIM4-203ENST00000355947 NRDCO43847 1150 aa15.93■□□□□ 0.14
TRIM4-203ENST00000355947 STX1AQ16623 288 aa15.93■□□□□ 0.14
TRIM4-203ENST00000355947 CCDC34Q96HJ3 373 aa15.93■□□□□ 0.14
TRIM4-203ENST00000355947 USP28Q96RU2 1077 aa15.93■□□□□ 0.14
TRIM4-203ENST00000355947 SLU7O95391 586 aaKnown RBP15.93■□□□□ 0.14
TRIM4-203ENST00000355947 SLC39A6Q13433 755 aa15.93■□□□□ 0.14
TRIM4-203ENST00000355947 HSP90AB3PQ58FF7 597 aa15.93■□□□□ 0.14
TRIM4-203ENST00000355947 BEND3Q5T5X7 828 aa15.93■□□□□ 0.14
TRIM4-203ENST00000355947 TTLL5Q6EMB2 1281 aa15.93■□□□□ 0.14
TRIM4-203ENST00000355947 SUCLG2Q96I99 432 aa15.93■□□□□ 0.14
TRIM4-203ENST00000355947 GJB4Q9NTQ9 266 aa15.93■□□□□ 0.14
TRIM4-203ENST00000355947 CFAP45Q9UL16 551 aa15.93■□□□□ 0.14
TRIM4-203ENST00000355947 ALKQ9UM73 1620 aa15.93■□□□□ 0.14
TRIM4-203ENST00000355947 SFPQP23246 707 aaKnown RBP eCLIP15.92■□□□□ 0.14
TRIM4-203ENST00000355947 CEBPAP49715 358 aaPredicted RBP15.92■□□□□ 0.14
TRIM4-203ENST00000355947 TOB2Q14106 344 aaPredicted RBP15.92■□□□□ 0.14
TRIM4-203ENST00000355947 ANKRD1Q15327 319 aa15.92■□□□□ 0.14
TRIM4-203ENST00000355947 CREBRFQ8IUR6 639 aa15.92■□□□□ 0.14
TRIM4-203ENST00000355947 PIK3C2BO00750 1634 aa15.92■□□□□ 0.14
TRIM4-203ENST00000355947 CCDC85AQ96PX6 553 aaPredicted RBP15.92■□□□□ 0.14
TRIM4-203ENST00000355947 NOL10Q9BSC4 688 aaKnown RBP15.92■□□□□ 0.14
TRIM4-203ENST00000355947 ATP5J2-PTCD1G3V325 749 aa15.92■□□□□ 0.14
TRIM4-203ENST00000355947 PTCD1O75127 700 aaKnown RBP15.92■□□□□ 0.14
TRIM4-203ENST00000355947 PLA2G4DQ86XP0 818 aa15.92■□□□□ 0.14
TRIM4-203ENST00000355947 TDRD7Q8NHU6 1098 aaKnown RBP15.92■□□□□ 0.14
TRIM4-203ENST00000355947 CCDC66A2RUB6 948 aa15.91■□□□□ 0.14
TRIM4-203ENST00000355947 NEK11Q8NG66 645 aa15.91■□□□□ 0.14
TRIM4-203ENST00000355947 GOLPH3LQ9H4A5 285 aa15.91■□□□□ 0.14
TRIM4-203ENST00000355947 SEC31AO94979 1220 aaKnown RBP15.91■□□□□ 0.14
TRIM4-203ENST00000355947 TNNT3P45378 269 aaPredicted RBP15.91■□□□□ 0.14
TRIM4-203ENST00000355947 UBXN4Q92575 508 aa15.91■□□□□ 0.14
TRIM4-203ENST00000355947 REREQ9P2R6 1566 aa15.91■□□□□ 0.14
TRIM4-203ENST00000355947 ATP2B1P20020 1258 aa15.9■□□□□ 0.14
TRIM4-203ENST00000355947 MARCKSP29966 332 aaPredicted RBP15.9■□□□□ 0.14
TRIM4-203ENST00000355947 NEO1Q92859 1461 aa15.9■□□□□ 0.14
TRIM4-203ENST00000355947 LMTK2Q8IWU2 1503 aa15.9■□□□□ 0.14
TRIM4-203ENST00000355947 MYO5BQ9ULV0 1848 aa15.9■□□□□ 0.14
TRIM4-203ENST00000355947 SERPINC1P01008 464 aa15.9■□□□□ 0.14
TRIM4-203ENST00000355947 POLA2Q14181 598 aa15.9■□□□□ 0.14
TRIM4-203ENST00000355947 TEX35Q5T0J7 233 aa15.9■□□□□ 0.14
TRIM4-203ENST00000355947 ANO10Q9NW15 660 aa15.9■□□□□ 0.14
TRIM4-203ENST00000355947 PTPDC1A2A3K4 754 aa15.9■□□□□ 0.14
TRIM4-203ENST00000355947 SASH1O94885 1247 aa15.9■□□□□ 0.14
TRIM4-203ENST00000355947 SLFN14P0C7P3 912 aa15.9■□□□□ 0.14
TRIM4-203ENST00000355947 TERF2Q15554 542 aa15.9■□□□□ 0.14
TRIM4-203ENST00000355947 C1orf141Q5JVX7 400 aa15.9■□□□□ 0.14
TRIM4-203ENST00000355947 MAP4K1Q92918 833 aa15.9■□□□□ 0.14
TRIM4-203ENST00000355947 XPO4Q9C0E2 1151 aaKnown RBP15.9■□□□□ 0.14
TRIM4-203ENST00000355947 AOX1Q06278 1338 aa15.9■□□□□ 0.14
TRIM4-203ENST00000355947 TTC41PQ6P2S7 1318 aa15.9■□□□□ 0.14
TRIM4-203ENST00000355947 SIGLEC1Q9BZZ2 1709 aa15.9■□□□□ 0.14
TRIM4-203ENST00000355947 GPHNQ9NQX3 736 aaPredicted RBP15.89■□□□□ 0.13
TRIM4-203ENST00000355947 A0A0G2JLW4 131 aa15.89■□□□□ 0.13
TRIM4-203ENST00000355947 HDGFP51858 240 aaKnown RBP15.89■□□□□ 0.13
TRIM4-203ENST00000355947 GYS2P54840 703 aa15.89■□□□□ 0.13
TRIM4-203ENST00000355947 CFAP100Q494V2 611 aa15.89■□□□□ 0.13
TRIM4-203ENST00000355947 MYD88Q99836 296 aa15.89■□□□□ 0.13
TRIM4-203ENST00000355947 ZCCHC17Q9NP64 241 aaKnown RBP15.89■□□□□ 0.13
TRIM4-203ENST00000355947 SNRKQ9NRH2 765 aa15.89■□□□□ 0.13
TRIM4-203ENST00000355947 DIP2CQ9Y2E4 1556 aa15.89■□□□□ 0.13
TRIM4-203ENST00000355947 FLT4P35916 1363 aa15.89■□□□□ 0.13
TRIM4-203ENST00000355947 GOLIM4O00461 696 aa15.89■□□□□ 0.13
TRIM4-203ENST00000355947 HOXC9P31274 260 aa15.88■□□□□ 0.13
TRIM4-203ENST00000355947 SCRN1Q12765 414 aa15.88■□□□□ 0.13
TRIM4-203ENST00000355947 DPCR1Q3MIW9 517 aa15.88■□□□□ 0.13
TRIM4-203ENST00000355947 ERC1Q8IUD2 1116 aa15.88■□□□□ 0.13
TRIM4-203ENST00000355947 TIGD1Q96MW7 591 aa15.88■□□□□ 0.13
TRIM4-203ENST00000355947 MAP3K5Q99683 1374 aa15.88■□□□□ 0.13
TRIM4-203ENST00000355947 ROBO2Q9HCK4 1378 aa15.88■□□□□ 0.13
TRIM4-203ENST00000355947 KIF20BQ96Q89 1820 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms