RNA–Protein interactions for RNA: ENST00000355637.8

RBFOX1-203, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 3,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-203ENST00000355637 C16orf87Q6PH81 154 aa10.35□□□□□ -0.75
RBFOX1-203ENST00000355637 ASXL1Q8IXJ9 1541 aa10.35□□□□□ -0.75
RBFOX1-203ENST00000355637 ATP10AO60312 1499 aa10.35□□□□□ -0.75
RBFOX1-203ENST00000355637 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.34□□□□□ -0.75
RBFOX1-203ENST00000355637 AP5Z1O43299 807 aa10.34□□□□□ -0.75
RBFOX1-203ENST00000355637 GADD45BO75293 160 aaPredicted RBP10.34□□□□□ -0.75
RBFOX1-203ENST00000355637 ZCRB1Q8TBF4 217 aaKnown RBP10.34□□□□□ -0.75
RBFOX1-203ENST00000355637 MKRN1Q9UHC7 482 aaKnown RBP10.34□□□□□ -0.75
RBFOX1-203ENST00000355637 SMARCA5O60264 1052 aaPredicted RBP10.34□□□□□ -0.75
RBFOX1-203ENST00000355637 CAVIN2O95810 425 aa10.34□□□□□ -0.75
RBFOX1-203ENST00000355637 GIMAP6Q6P9H5 292 aa10.34□□□□□ -0.75
RBFOX1-203ENST00000355637 IQUBQ8NA54 791 aa10.34□□□□□ -0.75
RBFOX1-203ENST00000355637 DRAXINQ8NBI3 349 aaPredicted RBP10.34□□□□□ -0.75
RBFOX1-203ENST00000355637 ACBD3Q9H3P7 528 aa10.34□□□□□ -0.75
RBFOX1-203ENST00000355637 CLIP2Q9UDT6 1046 aa10.34□□□□□ -0.75
RBFOX1-203ENST00000355637 CAPN7Q9Y6W3 813 aa10.34□□□□□ -0.75
RBFOX1-203ENST00000355637 RTEL1-TNFRSF6BF6WH68 1400 aa10.34□□□□□ -0.75
RBFOX1-203ENST00000355637 SASH3O75995 380 aa10.33□□□□□ -0.76
RBFOX1-203ENST00000355637 FMNL1O95466 1100 aaPredicted RBP10.33□□□□□ -0.76
RBFOX1-203ENST00000355637 CPP00450 1065 aa10.33□□□□□ -0.76
RBFOX1-203ENST00000355637 LAMB3Q13751 1172 aa10.33□□□□□ -0.76
RBFOX1-203ENST00000355637 ZNF280DQ6N043 979 aa10.33□□□□□ -0.76
RBFOX1-203ENST00000355637 BCL2L13Q9BXK5 485 aa10.33□□□□□ -0.76
RBFOX1-203ENST00000355637 CARD14Q9BXL6 1004 aa10.33□□□□□ -0.76
RBFOX1-203ENST00000355637 STK31Q9BXU1 1019 aa10.33□□□□□ -0.76
RBFOX1-203ENST00000355637 DNAI1Q9UI46 699 aa10.33□□□□□ -0.76
RBFOX1-203ENST00000355637 DMRT2Q9Y5R5 561 aa10.33□□□□□ -0.76
RBFOX1-203ENST00000355637 CHD1O14646 1710 aa10.33□□□□□ -0.76
RBFOX1-203ENST00000355637 GPTP24298 496 aa10.33□□□□□ -0.76
RBFOX1-203ENST00000355637 AMOTQ4VCS5 1084 aa10.33□□□□□ -0.76
RBFOX1-203ENST00000355637 TMEM132EQ6IEE7 984 aa10.33□□□□□ -0.76
RBFOX1-203ENST00000355637 CABS1Q96KC9 395 aa10.33□□□□□ -0.76
RBFOX1-203ENST00000355637 TSGA10Q9BZW7 698 aa10.33□□□□□ -0.76
RBFOX1-203ENST00000355637 ZMYM3Q14202 1370 aa10.33□□□□□ -0.76
RBFOX1-203ENST00000355637 ZNF521Q96K83 1311 aa10.33□□□□□ -0.76
RBFOX1-203ENST00000355637 U2AF1L5P0DN76 240 aaPredicted RBP10.33□□□□□ -0.76
RBFOX1-203ENST00000355637 U2AF1Q01081 240 aaKnown RBP eCLIP10.33□□□□□ -0.76
RBFOX1-203ENST00000355637 SAFB2Q14151 953 aaKnown RBP eCLIP10.33□□□□□ -0.76
RBFOX1-203ENST00000355637 KCNB1Q14721 858 aa10.33□□□□□ -0.76
RBFOX1-203ENST00000355637 NOL8Q76FK4 1167 aaKnown RBP10.33□□□□□ -0.76
RBFOX1-203ENST00000355637 NCAPG2Q86XI2 1143 aa10.33□□□□□ -0.76
RBFOX1-203ENST00000355637 B4GALNT2Q8NHY0 566 aa10.33□□□□□ -0.76
RBFOX1-203ENST00000355637 STAG1Q8WVM7 1258 aa10.33□□□□□ -0.76
RBFOX1-203ENST00000355637 ZCWPW1Q9H0M4 648 aa10.33□□□□□ -0.76
RBFOX1-203ENST00000355637 MCM8Q9UJA3 840 aa10.33□□□□□ -0.76
RBFOX1-203ENST00000355637 PHF8Q9UPP1 1060 aa10.33□□□□□ -0.76
RBFOX1-203ENST00000355637 SCNN1BP51168 640 aa10.32□□□□□ -0.76
RBFOX1-203ENST00000355637 TAX1BP1Q86VP1 789 aa10.32□□□□□ -0.76
RBFOX1-203ENST00000355637 TACO1Q9BSH4 297 aaKnown RBP10.32□□□□□ -0.76
RBFOX1-203ENST00000355637 SLC12A5Q9H2X9 1139 aa10.32□□□□□ -0.76
RBFOX1-203ENST00000355637 LAMC1P11047 1609 aa10.32□□□□□ -0.76
RBFOX1-203ENST00000355637 INPP5BP32019 993 aa10.32□□□□□ -0.76
RBFOX1-203ENST00000355637 RRP12Q5JTH9 1297 aaKnown RBP10.32□□□□□ -0.76
RBFOX1-203ENST00000355637 ZSCAN25Q6NSZ9 544 aa10.32□□□□□ -0.76
RBFOX1-203ENST00000355637 CCDC102AQ96A19 550 aa10.32□□□□□ -0.76
RBFOX1-203ENST00000355637 PHACTR1Q9C0D0 580 aa10.32□□□□□ -0.76
RBFOX1-203ENST00000355637 RANBP17Q9H2T7 1088 aaKnown RBP10.32□□□□□ -0.76
RBFOX1-203ENST00000355637 ARFGAP3Q9NP61 516 aa10.32□□□□□ -0.76
RBFOX1-203ENST00000355637 IL16Q14005 1332 aa10.32□□□□□ -0.76
RBFOX1-203ENST00000355637 MAGEA10P43363 369 aaPredicted RBP10.32□□□□□ -0.76
RBFOX1-203ENST00000355637 CCDC178Q5BJE1 867 aa10.32□□□□□ -0.76
RBFOX1-203ENST00000355637 HOMER1Q86YM7 354 aa10.32□□□□□ -0.76
RBFOX1-203ENST00000355637 EZH1Q92800 747 aaPredicted RBP10.32□□□□□ -0.76
RBFOX1-203ENST00000355637 PIK3C2GO75747 1445 aa10.31□□□□□ -0.76
RBFOX1-203ENST00000355637 E2F5Q15329 346 aa10.31□□□□□ -0.76
RBFOX1-203ENST00000355637 TMC6Q7Z403 805 aa10.31□□□□□ -0.76
RBFOX1-203ENST00000355637 KIAA1328Q86T90 577 aa10.31□□□□□ -0.76
RBFOX1-203ENST00000355637 ZKSCAN4Q969J2 545 aaPredicted RBP10.31□□□□□ -0.76
RBFOX1-203ENST00000355637 ARPC5LQ9BPX5 153 aa10.31□□□□□ -0.76
RBFOX1-203ENST00000355637 IRX2Q9BZI1 471 aaPredicted RBP10.31□□□□□ -0.76
RBFOX1-203ENST00000355637 YIPF3Q9GZM5 350 aa10.31□□□□□ -0.76
RBFOX1-203ENST00000355637 IQCGQ9H095 443 aaKnown RBP10.31□□□□□ -0.76
RBFOX1-203ENST00000355637 BICC1Q9H694 974 aaKnown RBP10.31□□□□□ -0.76
RBFOX1-203ENST00000355637 CHMP3Q9Y3E7 222 aa10.31□□□□□ -0.76
RBFOX1-203ENST00000355637 NKTRP30414 1462 aaKnown RBP10.31□□□□□ -0.76
RBFOX1-203ENST00000355637 PPP1R12BO60237 982 aaPredicted RBP10.31□□□□□ -0.76
RBFOX1-203ENST00000355637 ZRANB2O95218 330 aaKnown RBP eCLIP10.31□□□□□ -0.76
RBFOX1-203ENST00000355637 BRD1O95696 1058 aa10.31□□□□□ -0.76
RBFOX1-203ENST00000355637 CCDC114Q96M63 670 aa10.31□□□□□ -0.76
RBFOX1-203ENST00000355637 FAM107BQ9H098 131 aa10.31□□□□□ -0.76
RBFOX1-203ENST00000355637 MYO6Q9UM54 1294 aa10.31□□□□□ -0.76
RBFOX1-203ENST00000355637 ABCC1P33527 1531 aa10.31□□□□□ -0.76
RBFOX1-203ENST00000355637 H3BQF6 201 aa10.3□□□□□ -0.76
RBFOX1-203ENST00000355637 MYO1FO00160 1098 aa10.3□□□□□ -0.76
RBFOX1-203ENST00000355637 CHUKO15111 745 aa10.3□□□□□ -0.76
RBFOX1-203ENST00000355637 SSBP05455 408 aaKnown RBP eCLIP10.3□□□□□ -0.76
RBFOX1-203ENST00000355637 CACTINQ8WUQ7 758 aaKnown RBP10.3□□□□□ -0.76
RBFOX1-203ENST00000355637 TRIM4Q9C037 500 aa10.3□□□□□ -0.76
RBFOX1-203ENST00000355637 PSD3Q9NYI0 1048 aa10.3□□□□□ -0.76
RBFOX1-203ENST00000355637 STK24Q9Y6E0 443 aa10.3□□□□□ -0.76
RBFOX1-203ENST00000355637 TBC1D8O95759 1140 aa10.3□□□□□ -0.76
RBFOX1-203ENST00000355637 NEFHP12036 1026 aa10.3□□□□□ -0.76
RBFOX1-203ENST00000355637 RAB27AP51159 221 aa10.3□□□□□ -0.76
RBFOX1-203ENST00000355637 CDR1P51861 262 aa10.3□□□□□ -0.76
RBFOX1-203ENST00000355637 FOXD4Q12950 439 aaPredicted RBP10.3□□□□□ -0.76
RBFOX1-203ENST00000355637 HSP90B2PQ58FF3 399 aa10.3□□□□□ -0.76
RBFOX1-203ENST00000355637 TMEM110Q86TL2 294 aa10.3□□□□□ -0.76
RBFOX1-203ENST00000355637 CFAP53Q96M91 514 aa10.3□□□□□ -0.76
RBFOX1-203ENST00000355637 PDE11AQ9HCR9 933 aa10.3□□□□□ -0.76
RBFOX1-203ENST00000355637 IQSEC3Q9UPP2 1182 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms