RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 SRRTQ9BXP5 876 aaKnown RBP9.19□□□□□ -0.94
CD46-203ENST00000354848 ADCY9O60503 1353 aa9.19□□□□□ -0.94
CD46-203ENST00000354848 MAGEA9P43362 315 aa9.18□□□□□ -0.94
CD46-203ENST00000354848 KCNJ6P48051 423 aa9.18□□□□□ -0.94
CD46-203ENST00000354848 DDX54Q8TDD1 881 aaKnown RBP9.18□□□□□ -0.94
CD46-203ENST00000354848 DRC1Q96MC2 740 aa9.18□□□□□ -0.94
CD46-203ENST00000354848 PRAM1Q96QH2 718 aa9.18□□□□□ -0.94
CD46-203ENST00000354848 TM6SF1Q9BZW5 370 aa9.18□□□□□ -0.94
CD46-203ENST00000354848 MINK1Q8N4C8 1332 aaPredicted RBP9.18□□□□□ -0.94
CD46-203ENST00000354848 FANCGO15287 622 aa9.18□□□□□ -0.94
CD46-203ENST00000354848 IFIT2P09913 472 aaKnown RBP9.18□□□□□ -0.94
CD46-203ENST00000354848 EVCP57679 992 aa9.18□□□□□ -0.94
CD46-203ENST00000354848 PTH1RQ03431 593 aa9.18□□□□□ -0.94
CD46-203ENST00000354848 PRPF40BQ6NWY9 871 aaKnown RBP9.18□□□□□ -0.94
CD46-203ENST00000354848 LARP1Q6PKG0 1096 aaKnown RBP9.18□□□□□ -0.94
CD46-203ENST00000354848 STK26Q9P289 416 aa9.18□□□□□ -0.94
CD46-203ENST00000354848 URI1O94763 535 aaPredicted RBP9.18□□□□□ -0.94
CD46-203ENST00000354848 CNTROBQ8N137 903 aa9.18□□□□□ -0.94
CD46-203ENST00000354848 AOPEPQ8N6M6 819 aa9.18□□□□□ -0.94
CD46-203ENST00000354848 CCDC150Q8NCX0 1101 aa9.18□□□□□ -0.94
CD46-203ENST00000354848 FUT8Q9BYC5 575 aa9.18□□□□□ -0.94
CD46-203ENST00000354848 H3BQF6 201 aa9.17□□□□□ -0.94
CD46-203ENST00000354848 ATP2B1P20020 1258 aa9.17□□□□□ -0.94
CD46-203ENST00000354848 SFPQP23246 707 aaKnown RBP eCLIP9.17□□□□□ -0.94
CD46-203ENST00000354848 LRRFIP1Q32MZ4 808 aaKnown RBP9.17□□□□□ -0.94
CD46-203ENST00000354848 TRIM65Q6PJ69 517 aa9.17□□□□□ -0.94
CD46-203ENST00000354848 ARFGAP3Q9NP61 516 aa9.17□□□□□ -0.94
CD46-203ENST00000354848 CRYBG1Q9Y4K1 1723 aa9.17□□□□□ -0.94
CD46-203ENST00000354848 LMTK2Q8IWU2 1503 aa9.17□□□□□ -0.94
CD46-203ENST00000354848 IVLP07476 585 aa9.17□□□□□ -0.94
CD46-203ENST00000354848 LEKR1Q6ZMV7 388 aa9.17□□□□□ -0.94
CD46-203ENST00000354848 CABP1Q9NZU7 370 aa9.17□□□□□ -0.94
CD46-203ENST00000354848 PARP3Q9Y6F1 533 aa9.17□□□□□ -0.94
CD46-203ENST00000354848 TTC41PQ6P2S7 1318 aa9.16□□□□□ -0.94
CD46-203ENST00000354848 CTAGE5O15320 804 aa9.16□□□□□ -0.94
CD46-203ENST00000354848 PRR29P0C7W0 189 aa9.16□□□□□ -0.94
CD46-203ENST00000354848 TMC6Q7Z403 805 aa9.16□□□□□ -0.94
CD46-203ENST00000354848 GPR161Q8N6U8 529 aaKnown RBP9.16□□□□□ -0.94
CD46-203ENST00000354848 ANO10Q9NW15 660 aa9.16□□□□□ -0.94
CD46-203ENST00000354848 MYH15Q9Y2K3 1946 aa9.16□□□□□ -0.94
CD46-203ENST00000354848 SOS1Q07889 1333 aaPredicted RBP9.16□□□□□ -0.94
CD46-203ENST00000354848 EIF3CLB5ME19 914 aaKnown RBP9.16□□□□□ -0.94
CD46-203ENST00000354848 CLGNO14967 610 aa9.16□□□□□ -0.94
CD46-203ENST00000354848 GIGYF1O75420 1035 aaPredicted RBP9.16□□□□□ -0.94
CD46-203ENST00000354848 SART3Q15020 963 aaKnown RBP9.16□□□□□ -0.94
CD46-203ENST00000354848 MCM10Q7L590 875 aa9.16□□□□□ -0.94
CD46-203ENST00000354848 GPATCH11Q8N954 259 aa9.16□□□□□ -0.94
CD46-203ENST00000354848 KCNB2Q92953 911 aa9.16□□□□□ -0.94
CD46-203ENST00000354848 EIF3CQ99613 913 aaKnown RBP9.16□□□□□ -0.94
CD46-203ENST00000354848 RAB11FIP3O75154 756 aa9.16□□□□□ -0.94
CD46-203ENST00000354848 APPP05067 770 aa9.16□□□□□ -0.94
CD46-203ENST00000354848 COL9A3Q14050 684 aaPredicted RBP9.16□□□□□ -0.94
CD46-203ENST00000354848 FOXR1Q6PIV2 292 aa9.16□□□□□ -0.94
CD46-203ENST00000354848 CEP57L1Q8IYX8 460 aa9.16□□□□□ -0.94
CD46-203ENST00000354848 XPO4Q9C0E2 1151 aaKnown RBP9.16□□□□□ -0.94
CD46-203ENST00000354848 NPATQ14207 1427 aa9.15□□□□□ -0.94
CD46-203ENST00000354848 NEXMIFQ5QGS0 1516 aa9.15□□□□□ -0.94
CD46-203ENST00000354848 SMC2O95347 1197 aa9.15□□□□□ -0.94
CD46-203ENST00000354848 MYCNP04198 464 aaPredicted RBP9.15□□□□□ -0.94
CD46-203ENST00000354848 PTPRMP28827 1452 aa9.15□□□□□ -0.94
CD46-203ENST00000354848 XRN1Q8IZH2 1706 aaKnown RBP9.15□□□□□ -0.94
CD46-203ENST00000354848 CCP110O43303 1012 aa9.15□□□□□ -0.94
CD46-203ENST00000354848 NRDCO43847 1150 aa9.15□□□□□ -0.94
CD46-203ENST00000354848 NECTIN1Q15223 517 aa9.15□□□□□ -0.94
CD46-203ENST00000354848 PARD6BQ9BYG5 372 aa9.15□□□□□ -0.94
CD46-203ENST00000354848 DEF6Q9H4E7 631 aa9.15□□□□□ -0.94
CD46-203ENST00000354848 ATP7BP35670 1465 aa9.15□□□□□ -0.95
CD46-203ENST00000354848 RESTQ13127 1097 aa9.14□□□□□ -0.95
CD46-203ENST00000354848 GNL2Q13823 731 aaKnown RBP9.14□□□□□ -0.95
CD46-203ENST00000354848 CT47A1Q5JQC4 288 aaPredicted RBP9.14□□□□□ -0.95
CD46-203ENST00000354848 AXDND1Q5T1B0 1012 aaPredicted RBP9.14□□□□□ -0.95
CD46-203ENST00000354848 CCAR1Q8IX12 1150 aaKnown RBP9.14□□□□□ -0.95
CD46-203ENST00000354848 FBXW7Q969H0 707 aa9.14□□□□□ -0.95
CD46-203ENST00000354848 GOLPH3LQ9H4A5 285 aa9.14□□□□□ -0.95
CD46-203ENST00000354848 IFNKQ9P0W0 207 aa9.14□□□□□ -0.95
CD46-203ENST00000354848 MAP2K7O14733 419 aa9.14□□□□□ -0.95
CD46-203ENST00000354848 RPS6KA5O75582 802 aa9.14□□□□□ -0.95
CD46-203ENST00000354848 ZKSCAN1P17029 563 aaPredicted RBP9.14□□□□□ -0.95
CD46-203ENST00000354848 LONRF2Q1L5Z9 754 aa9.14□□□□□ -0.95
CD46-203ENST00000354848 RSRC2Q7L4I2 434 aaKnown RBP9.14□□□□□ -0.95
CD46-203ENST00000354848 PPM1EQ8WY54 764 aa9.14□□□□□ -0.95
CD46-203ENST00000354848 ERCC4Q92889 916 aaPredicted RBP9.14□□□□□ -0.95
CD46-203ENST00000354848 SENP3Q9H4L4 574 aaPredicted RBP9.14□□□□□ -0.95
CD46-203ENST00000354848 VPS18Q9P253 973 aa9.14□□□□□ -0.95
CD46-203ENST00000354848 CORO7P57737 925 aa9.14□□□□□ -0.95
CD46-203ENST00000354848 CEBPZQ03701 1054 aaKnown RBP9.14□□□□□ -0.95
CD46-203ENST00000354848 RHPN1Q8TCX5 695 aa9.14□□□□□ -0.95
CD46-203ENST00000354848 RUFY2Q8WXA3 655 aa9.14□□□□□ -0.95
CD46-203ENST00000354848 TCEANC2Q96MN5 208 aa9.14□□□□□ -0.95
CD46-203ENST00000354848 NAT10Q9H0A0 1025 aaKnown RBP9.14□□□□□ -0.95
CD46-203ENST00000354848 MIS18AQ9NYP9 233 aa9.14□□□□□ -0.95
CD46-203ENST00000354848 CFAP45Q9UL16 551 aa9.14□□□□□ -0.95
CD46-203ENST00000354848 ARAP3Q8WWN8 1544 aa9.13□□□□□ -0.95
CD46-203ENST00000354848 E2F4Q16254 413 aa9.13□□□□□ -0.95
CD46-203ENST00000354848 SSH3Q8TE77 659 aa9.13□□□□□ -0.95
CD46-203ENST00000354848 DDX11Q96FC9 970 aa9.13□□□□□ -0.95
CD46-203ENST00000354848 CDK19Q9BWU1 502 aa9.13□□□□□ -0.95
CD46-203ENST00000354848 ZSCAN16Q9H4T2 348 aaPredicted RBP9.13□□□□□ -0.95
CD46-203ENST00000354848 KINO60870 393 aaKnown RBP9.13□□□□□ -0.95
CD46-203ENST00000354848 SURF6O75683 361 aaKnown RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms