RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 TICAM2Q86XR7 235 aa26.63■■□□□ 1.85
NKX2-1-201ENST00000354822 USP48Q86UV5 1035 aa26.63■■□□□ 1.85
NKX2-1-201ENST00000354822 PAPPAQ13219 1627 aa26.62■■□□□ 1.85
NKX2-1-201ENST00000354822 PHF14O94880 888 aa26.62■■□□□ 1.85
NKX2-1-201ENST00000354822 FOXO4P98177 505 aa26.62■■□□□ 1.85
NKX2-1-201ENST00000354822 LARP6Q9BRS8 491 aaKnown RBP26.62■■□□□ 1.85
NKX2-1-201ENST00000354822 RBSNQ9H1K0 784 aa26.62■■□□□ 1.85
NKX2-1-201ENST00000354822 CCDC83Q8IWF9 413 aa26.61■■□□□ 1.85
NKX2-1-201ENST00000354822 CCDC191Q8NCU4 936 aa26.61■■□□□ 1.85
NKX2-1-201ENST00000354822 SYCE3A1L190 88 aa26.61■■□□□ 1.85
NKX2-1-201ENST00000354822 BLOC1S2Q6QNY1 142 aa26.61■■□□□ 1.85
NKX2-1-201ENST00000354822 HAUS7Q99871 368 aa26.61■■□□□ 1.85
NKX2-1-201ENST00000354822 GPR108Q9NPR9 543 aa26.61■■□□□ 1.85
NKX2-1-201ENST00000354822 F13A1P00488 732 aa26.6■■□□□ 1.85
NKX2-1-201ENST00000354822 KRT32Q14532 448 aa26.6■■□□□ 1.85
NKX2-1-201ENST00000354822 TAF5LO75529 589 aa26.6■■□□□ 1.85
NKX2-1-201ENST00000354822 LARGE1O95461 756 aa26.6■■□□□ 1.85
NKX2-1-201ENST00000354822 GJB2P29033 226 aa26.6■■□□□ 1.85
NKX2-1-201ENST00000354822 USPL1Q5W0Q7 1092 aa26.6■■□□□ 1.85
NKX2-1-201ENST00000354822 CSPP1Q1MSJ5 1256 aa26.59■■□□□ 1.85
NKX2-1-201ENST00000354822 DDX54Q8TDD1 881 aaKnown RBP26.59■■□□□ 1.85
NKX2-1-201ENST00000354822 ME3Q16798 604 aa26.58■■□□□ 1.85
NKX2-1-201ENST00000354822 TTLL7Q6ZT98 887 aa26.58■■□□□ 1.85
NKX2-1-201ENST00000354822 ATG3Q9NT62 314 aa26.58■■□□□ 1.85
NKX2-1-201ENST00000354822 DBNDD2Q9BQY9 259 aa26.58■■□□□ 1.85
NKX2-1-201ENST00000354822 KCPQ6ZWJ8 1503 aa26.58■■□□□ 1.85
NKX2-1-201ENST00000354822 RPS6KB1P23443 525 aa26.57■■□□□ 1.84
NKX2-1-201ENST00000354822 IL15P40933 162 aaPredicted RBP26.57■■□□□ 1.84
NKX2-1-201ENST00000354822 A1BGP04217 495 aa26.57■■□□□ 1.84
NKX2-1-201ENST00000354822 ZNF589Q86UQ0 364 aaPredicted RBP26.57■■□□□ 1.84
NKX2-1-201ENST00000354822 CHMP3Q9Y3E7 222 aa26.57■■□□□ 1.84
NKX2-1-201ENST00000354822 FOXD4L6Q3SYB3 417 aaPredicted RBP26.56■■□□□ 1.84
NKX2-1-201ENST00000354822 FOXD4L3Q6VB84 417 aaPredicted RBP26.56■■□□□ 1.84
NKX2-1-201ENST00000354822 KLHL34Q8N239 644 aa26.56■■□□□ 1.84
NKX2-1-201ENST00000354822 TPCN1Q9ULQ1 816 aa26.56■■□□□ 1.84
NKX2-1-201ENST00000354822 MCMDC2Q4G0Z9 681 aa26.56■■□□□ 1.84
NKX2-1-201ENST00000354822 HS1BP3Q53T59 392 aa26.56■■□□□ 1.84
NKX2-1-201ENST00000354822 U3KPZ7 1027 aaPredicted RBP26.56■■□□□ 1.84
NKX2-1-201ENST00000354822 COL14A1Q05707 1796 aaKnown RBP26.55■■□□□ 1.84
NKX2-1-201ENST00000354822 TNS2Q63HR2 1409 aa26.55■■□□□ 1.84
NKX2-1-201ENST00000354822 ROBO1Q9Y6N7 1651 aa26.55■■□□□ 1.84
NKX2-1-201ENST00000354822 UBE2HP62256 183 aa26.55■■□□□ 1.84
NKX2-1-201ENST00000354822 EDC3Q96F86 508 aaKnown RBP26.55■■□□□ 1.84
NKX2-1-201ENST00000354822 GDPD2Q9HCC8 539 aa26.55■■□□□ 1.84
NKX2-1-201ENST00000354822 GADD45BO75293 160 aaPredicted RBP26.54■■□□□ 1.84
NKX2-1-201ENST00000354822 PDCP20941 246 aa26.54■■□□□ 1.84
NKX2-1-201ENST00000354822 MTMR6Q9Y217 621 aa26.54■■□□□ 1.84
NKX2-1-201ENST00000354822 NUP188Q5SRE5 1749 aa26.54■■□□□ 1.84
NKX2-1-201ENST00000354822 LETM1O95202 739 aaPredicted RBP26.54■■□□□ 1.84
NKX2-1-201ENST00000354822 ATG9AQ7Z3C6 839 aa26.54■■□□□ 1.84
NKX2-1-201ENST00000354822 KBTBD3Q8NAB2 608 aa26.54■■□□□ 1.84
NKX2-1-201ENST00000354822 DNAJC2Q99543 621 aaKnown RBP26.54■■□□□ 1.84
NKX2-1-201ENST00000354822 BTG4Q9NY30 223 aa26.54■■□□□ 1.84
NKX2-1-201ENST00000354822 CNPY2Q9Y2B0 182 aa26.54■■□□□ 1.84
NKX2-1-201ENST00000354822 AHDC1Q5TGY3 1603 aaPredicted RBP26.53■■□□□ 1.84
NKX2-1-201ENST00000354822 TEX13AQ9BXU3 409 aaPredicted RBP26.53■■□□□ 1.84
NKX2-1-201ENST00000354822 TOGARAM1Q9Y4F4 1720 aa26.53■■□□□ 1.84
NKX2-1-201ENST00000354822 CIAO1O76071 339 aa26.53■■□□□ 1.84
NKX2-1-201ENST00000354822 PDLIM2Q96JY6 352 aa26.53■■□□□ 1.84
NKX2-1-201ENST00000354822 TSPY26PQ9H489 355 aa26.53■■□□□ 1.84
NKX2-1-201ENST00000354822 ST3GAL1Q11201 340 aa26.52■■□□□ 1.84
NKX2-1-201ENST00000354822 COL22A1Q8NFW1 1626 aaPredicted RBP26.52■■□□□ 1.84
NKX2-1-201ENST00000354822 EYA2O00167 538 aa26.51■■□□□ 1.84
NKX2-1-201ENST00000354822 ZBTB3Q9H5J0 574 aa26.51■■□□□ 1.84
NKX2-1-201ENST00000354822 TCHHQ07283 1943 aa26.51■■□□□ 1.83
NKX2-1-201ENST00000354822 LARP1BQ659C4 914 aaKnown RBP26.5■■□□□ 1.83
NKX2-1-201ENST00000354822 NECAB1Q8N987 351 aa26.5■■□□□ 1.83
NKX2-1-201ENST00000354822 NEUROD6Q96NK8 337 aa26.5■■□□□ 1.83
NKX2-1-201ENST00000354822 TMOD3Q9NYL9 352 aa26.5■■□□□ 1.83
NKX2-1-201ENST00000354822 SH3TC1Q8TE82 1336 aa26.5■■□□□ 1.83
NKX2-1-201ENST00000354822 PALLDQ8WX93 1383 aa26.5■■□□□ 1.83
NKX2-1-201ENST00000354822 CCDC183Q5T5S1 534 aa26.5■■□□□ 1.83
NKX2-1-201ENST00000354822 NEK1Q96PY6 1258 aa26.5■■□□□ 1.83
NKX2-1-201ENST00000354822 ISCA1Q9BUE6 129 aa26.5■■□□□ 1.83
NKX2-1-201ENST00000354822 HELLSQ9NRZ9 838 aa26.5■■□□□ 1.83
NKX2-1-201ENST00000354822 TRIM28Q13263 835 aaKnown RBP26.49■■□□□ 1.83
NKX2-1-201ENST00000354822 VSIG10Q8N0Z9 540 aa26.49■■□□□ 1.83
NKX2-1-201ENST00000354822 FBXO3Q9UK99 471 aa26.49■■□□□ 1.83
NKX2-1-201ENST00000354822 ZNF609O15014 1411 aa26.49■■□□□ 1.83
NKX2-1-201ENST00000354822 TOB2Q14106 344 aaPredicted RBP26.48■■□□□ 1.83
NKX2-1-201ENST00000354822 ZSCAN30Q86W11 494 aa26.48■■□□□ 1.83
NKX2-1-201ENST00000354822 TCIRG1Q13488 830 aa26.48■■□□□ 1.83
NKX2-1-201ENST00000354822 DDX46Q7L014 1031 aaKnown RBP26.48■■□□□ 1.83
NKX2-1-201ENST00000354822 PAG1Q9NWQ8 432 aa26.48■■□□□ 1.83
NKX2-1-201ENST00000354822 TJP1Q07157 1748 aa26.47■■□□□ 1.83
NKX2-1-201ENST00000354822 FAM184AQ8NB25 1140 aa26.47■■□□□ 1.83
NKX2-1-201ENST00000354822 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.47■■□□□ 1.83
NKX2-1-201ENST00000354822 DISP2A7MBM2 1401 aa26.47■■□□□ 1.83
NKX2-1-201ENST00000354822 VPS37CA5D8V6 355 aaPredicted RBP26.46■■□□□ 1.83
NKX2-1-201ENST00000354822 HMGB1P09429 215 aaKnown RBP26.46■■□□□ 1.83
NKX2-1-201ENST00000354822 NDUFB9Q9Y6M9 179 aa26.46■■□□□ 1.83
NKX2-1-201ENST00000354822 COL16A1Q07092 1604 aaPredicted RBP26.46■■□□□ 1.83
NKX2-1-201ENST00000354822 TIMM10P62072 90 aa26.46■■□□□ 1.83
NKX2-1-201ENST00000354822 TAF6LQ9Y6J9 622 aa26.46■■□□□ 1.83
NKX2-1-201ENST00000354822 FIBPO43427 364 aa26.44■■□□□ 1.82
NKX2-1-201ENST00000354822 DNM1Q05193 864 aaKnown RBP26.44■■□□□ 1.82
NKX2-1-201ENST00000354822 DSCC1Q9BVC3 393 aa26.44■■□□□ 1.82
NKX2-1-201ENST00000354822 PLCH1Q4KWH8 1693 aa26.44■■□□□ 1.82
NKX2-1-201ENST00000354822 GOLIM4O00461 696 aa26.44■■□□□ 1.82
NKX2-1-201ENST00000354822 CCDC57Q2TAC2 916 aa26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms