RNA–Protein interactions for RNA: ENST00000354500.6

TRPM3-201, Transcript of transient receptor potential cation channel subfamily M member 3, humanhuman

TSL 1 (best)

Gene TRPM3, Length 4,459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM3-201ENST00000354500 MKNK2Q9HBH9 465 aa14.19□□□□□ -0.14
TRPM3-201ENST00000354500 NCOA5Q9HCD5 579 aaKnown RBP14.19□□□□□ -0.14
TRPM3-201ENST00000354500 MAPK8IP2Q13387 824 aaPredicted RBP14.19□□□□□ -0.14
TRPM3-201ENST00000354500 NOLC1Q14978 699 aaKnown RBP eCLIP14.19□□□□□ -0.14
TRPM3-201ENST00000354500 SOGA3Q5TF21 947 aa14.19□□□□□ -0.14
TRPM3-201ENST00000354500 IP6K1Q92551 441 aa14.19□□□□□ -0.14
TRPM3-201ENST00000354500 ANKIB1Q9P2G1 1089 aa14.19□□□□□ -0.14
TRPM3-201ENST00000354500 ZKSCAN5Q9Y2L8 839 aa14.19□□□□□ -0.14
TRPM3-201ENST00000354500 MAST1Q9Y2H9 1570 aa14.18□□□□□ -0.14
TRPM3-201ENST00000354500 TOP1P11387 765 aaKnown RBP14.18□□□□□ -0.14
TRPM3-201ENST00000354500 ENOX2Q16206 610 aaKnown RBP14.18□□□□□ -0.14
TRPM3-201ENST00000354500 SNX14Q9Y5W7 946 aa14.18□□□□□ -0.14
TRPM3-201ENST00000354500 ATP7AQ04656 1500 aa14.18□□□□□ -0.14
TRPM3-201ENST00000354500 NCOA7Q8NI08 942 aa14.18□□□□□ -0.14
TRPM3-201ENST00000354500 VAT1LQ9HCJ6 419 aa14.18□□□□□ -0.14
TRPM3-201ENST00000354500 HMG20BQ9P0W2 317 aa14.18□□□□□ -0.14
TRPM3-201ENST00000354500 ATP10AO60312 1499 aa14.18□□□□□ -0.14
TRPM3-201ENST00000354500 A1BGP04217 495 aa14.18□□□□□ -0.14
TRPM3-201ENST00000354500 ARHGAP29Q52LW3 1261 aa14.18□□□□□ -0.14
TRPM3-201ENST00000354500 DEF6Q9H4E7 631 aa14.18□□□□□ -0.14
TRPM3-201ENST00000354500 PAG1Q9NWQ8 432 aa14.18□□□□□ -0.14
TRPM3-201ENST00000354500 JAG2Q9Y219 1238 aa14.18□□□□□ -0.14
TRPM3-201ENST00000354500 LMOD1P29536 600 aaPredicted RBP14.17□□□□□ -0.14
TRPM3-201ENST00000354500 DNA2P51530 1060 aa14.17□□□□□ -0.14
TRPM3-201ENST00000354500 CAVIN4Q5BKX8 364 aa14.17□□□□□ -0.14
TRPM3-201ENST00000354500 DDX21Q9NR30 783 aaKnown RBP eCLIP14.17□□□□□ -0.14
TRPM3-201ENST00000354500 CCDC171Q6TFL3 1326 aa14.17□□□□□ -0.14
TRPM3-201ENST00000354500 SLC5A1P13866 664 aa14.17□□□□□ -0.14
TRPM3-201ENST00000354500 UNC5CLQ8IV45 518 aa14.17□□□□□ -0.14
TRPM3-201ENST00000354500 KIF18AQ8NI77 898 aa14.17□□□□□ -0.14
TRPM3-201ENST00000354500 SUCLG2Q96I99 432 aa14.17□□□□□ -0.14
TRPM3-201ENST00000354500 TMEM63CQ9P1W3 806 aa14.17□□□□□ -0.14
TRPM3-201ENST00000354500 ERVK-7P63135 1459 aa14.17□□□□□ -0.14
TRPM3-201ENST00000354500 MCM5P33992 734 aa14.17□□□□□ -0.14
TRPM3-201ENST00000354500 FAM193AP78312 1265 aa14.17□□□□□ -0.14
TRPM3-201ENST00000354500 NOM1Q5C9Z4 860 aaKnown RBP14.17□□□□□ -0.14
TRPM3-201ENST00000354500 ZFYVE9O95405 1425 aa14.17□□□□□ -0.14
TRPM3-201ENST00000354500 SGSM2O43147 1006 aa14.17□□□□□ -0.14
TRPM3-201ENST00000354500 CBFA2T2O43439 604 aa14.17□□□□□ -0.14
TRPM3-201ENST00000354500 EIF5P55010 431 aaKnown RBP14.17□□□□□ -0.14
TRPM3-201ENST00000354500 TYRO3Q06418 890 aa14.17□□□□□ -0.14
TRPM3-201ENST00000354500 AXDND1Q5T1B0 1012 aaPredicted RBP14.17□□□□□ -0.14
TRPM3-201ENST00000354500 FAM200AQ8TCP9 573 aa14.17□□□□□ -0.14
TRPM3-201ENST00000354500 ZNHIT6Q9NWK9 470 aaKnown RBP14.17□□□□□ -0.14
TRPM3-201ENST00000354500 PDIA4P13667 645 aaKnown RBP14.16□□□□□ -0.14
TRPM3-201ENST00000354500 SSRP1Q08945 709 aaKnown RBP14.16□□□□□ -0.14
TRPM3-201ENST00000354500 ZNF790Q6PG37 636 aa14.16□□□□□ -0.14
TRPM3-201ENST00000354500 TRMT1LQ7Z2T5 733 aaKnown RBP14.16□□□□□ -0.14
TRPM3-201ENST00000354500 CTCFLQ8NI51 663 aaPredicted RBP14.16□□□□□ -0.14
TRPM3-201ENST00000354500 ERCC4Q92889 916 aaPredicted RBP14.16□□□□□ -0.14
TRPM3-201ENST00000354500 DACH1Q9UI36 760 aa14.16□□□□□ -0.14
TRPM3-201ENST00000354500 ZNF652Q9Y2D9 606 aa14.16□□□□□ -0.14
TRPM3-201ENST00000354500 IGSF3O75054 1194 aa14.16□□□□□ -0.14
TRPM3-201ENST00000354500 PTGS1P23219 599 aa14.16□□□□□ -0.14
TRPM3-201ENST00000354500 IQCA1Q86XH1 822 aa14.16□□□□□ -0.14
TRPM3-201ENST00000354500 SIRT2Q8IXJ6 389 aa14.16□□□□□ -0.14
TRPM3-201ENST00000354500 AOPEPQ8N6M6 819 aa14.16□□□□□ -0.14
TRPM3-201ENST00000354500 MIGA1Q8NAN2 632 aa14.16□□□□□ -0.14
TRPM3-201ENST00000354500 GCC2Q8IWJ2 1684 aa14.16□□□□□ -0.14
TRPM3-201ENST00000354500 KDM5CP41229 1560 aa14.16□□□□□ -0.14
TRPM3-201ENST00000354500 EPB41L2O43491 1005 aaKnown RBP14.16□□□□□ -0.14
TRPM3-201ENST00000354500 RUFY3Q7L099 469 aa14.16□□□□□ -0.14
TRPM3-201ENST00000354500 ALG1Q9BT22 464 aa14.16□□□□□ -0.14
TRPM3-201ENST00000354500 LMBRD1Q9NUN5 540 aa14.16□□□□□ -0.14
TRPM3-201ENST00000354500 ZFYVE27Q5T4F4 411 aa14.15□□□□□ -0.14
TRPM3-201ENST00000354500 DZIP1Q86YF9 867 aaKnown RBP14.15□□□□□ -0.14
TRPM3-201ENST00000354500 ZNF496Q96IT1 587 aaPredicted RBP14.15□□□□□ -0.14
TRPM3-201ENST00000354500 PRC1O43663 620 aa14.15□□□□□ -0.14
TRPM3-201ENST00000354500 AFMP43652 599 aa14.15□□□□□ -0.14
TRPM3-201ENST00000354500 STX1AQ16623 288 aa14.15□□□□□ -0.14
TRPM3-201ENST00000354500 WASF1Q92558 559 aa14.15□□□□□ -0.14
TRPM3-201ENST00000354500 PBRM1Q86U86 1689 aa14.15□□□□□ -0.14
TRPM3-201ENST00000354500 MFSD6Q6ZSS7 791 aa14.15□□□□□ -0.14
TRPM3-201ENST00000354500 ZKSCAN3Q9BRR0 538 aa14.15□□□□□ -0.14
TRPM3-201ENST00000354500 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.15□□□□□ -0.14
TRPM3-201ENST00000354500 ABCC4O15439 1325 aa14.15□□□□□ -0.14
TRPM3-201ENST00000354500 TTC41PQ6P2S7 1318 aa14.15□□□□□ -0.14
TRPM3-201ENST00000354500 PTPDC1A2A3K4 754 aa14.15□□□□□ -0.14
TRPM3-201ENST00000354500 IL15P40933 162 aaPredicted RBP14.15□□□□□ -0.14
TRPM3-201ENST00000354500 NLRP5P59047 1200 aa14.15□□□□□ -0.14
TRPM3-201ENST00000354500 STIM1Q13586 685 aa14.15□□□□□ -0.14
TRPM3-201ENST00000354500 TRERF1Q96PN7 1200 aa14.15□□□□□ -0.14
TRPM3-201ENST00000354500 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.15□□□□□ -0.14
TRPM3-201ENST00000354500 CT47A1Q5JQC4 288 aaPredicted RBP14.14□□□□□ -0.15
TRPM3-201ENST00000354500 PPP4R3BQ5MIZ7 849 aa14.14□□□□□ -0.15
TRPM3-201ENST00000354500 EDC4Q6P2E9 1401 aaKnown RBP14.14□□□□□ -0.15
TRPM3-201ENST00000354500 TBX22Q9Y458 520 aa14.14□□□□□ -0.15
TRPM3-201ENST00000354500 RTL1A6NKG5 1358 aa14.14□□□□□ -0.15
TRPM3-201ENST00000354500 INSRP06213 1382 aa14.14□□□□□ -0.15
TRPM3-201ENST00000354500 YEATS2Q9ULM3 1422 aa14.14□□□□□ -0.15
TRPM3-201ENST00000354500 CCP110O43303 1012 aa14.14□□□□□ -0.15
TRPM3-201ENST00000354500 SKILP12757 684 aa14.14□□□□□ -0.15
TRPM3-201ENST00000354500 INTS4Q96HW7 963 aaKnown RBP14.14□□□□□ -0.15
TRPM3-201ENST00000354500 PKNOX2Q96KN3 472 aa14.14□□□□□ -0.15
TRPM3-201ENST00000354500 A0A1B0GVL5 298 aa14.14□□□□□ -0.15
TRPM3-201ENST00000354500 C6orf229H3BNL8 230 aa14.14□□□□□ -0.15
TRPM3-201ENST00000354500 JAK2O60674 1132 aa14.14□□□□□ -0.15
TRPM3-201ENST00000354500 SYKP43405 635 aa14.14□□□□□ -0.15
TRPM3-201ENST00000354500 ZHX1Q9UKY1 873 aaPredicted RBP14.14□□□□□ -0.15
TRPM3-201ENST00000354500 CCDC196A0A1B0GTZ2 297 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms