RNA–Protein interactions for RNA: ENST00000351959.9

TNFRSF25-203, Transcript of TNF receptor superfamily member 25, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF25, Length 1,441 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-203ENST00000351959 CHMP3Q9Y3E7 222 aa25.04■■□□□ 1.6
TNFRSF25-203ENST00000351959 C10orf71Q711Q0 1435 aa25.03■■□□□ 1.6
TNFRSF25-203ENST00000351959 SRGAP3O43295 1099 aa25.03■■□□□ 1.6
TNFRSF25-203ENST00000351959 CCDC85AQ96PX6 553 aaPredicted RBP25.03■■□□□ 1.6
TNFRSF25-203ENST00000351959 GREM2Q9H772 168 aa25.03■■□□□ 1.6
TNFRSF25-203ENST00000351959 CD2APQ9Y5K6 639 aa25.03■■□□□ 1.6
TNFRSF25-203ENST00000351959 DDX60Q8IY21 1712 aaKnown RBP25.02■■□□□ 1.6
TNFRSF25-203ENST00000351959 IFIT5Q13325 482 aaKnown RBP25.02■■□□□ 1.6
TNFRSF25-203ENST00000351959 CCDC57Q2TAC2 916 aa25.02■■□□□ 1.6
TNFRSF25-203ENST00000351959 RTL9Q8NET4 1388 aa25.01■■□□□ 1.59
TNFRSF25-203ENST00000351959 PNMA6EA0A0J9YXQ4 647 aa25.01■■□□□ 1.59
TNFRSF25-203ENST00000351959 H0YIN7 160 aa25.01■■□□□ 1.59
TNFRSF25-203ENST00000351959 HMMRO75330 724 aa25.01■■□□□ 1.59
TNFRSF25-203ENST00000351959 SRGNP10124 158 aa25.01■■□□□ 1.59
TNFRSF25-203ENST00000351959 FAM161AQ3B820 660 aa25.01■■□□□ 1.59
TNFRSF25-203ENST00000351959 SIRT2Q8IXJ6 389 aa25.01■■□□□ 1.59
TNFRSF25-203ENST00000351959 SSH3Q8TE77 659 aa25.01■■□□□ 1.59
TNFRSF25-203ENST00000351959 RPGRQ92834 1020 aaKnown RBP25.01■■□□□ 1.59
TNFRSF25-203ENST00000351959 ANKRD18BA2A2Z9 1011 aa25■■□□□ 1.59
TNFRSF25-203ENST00000351959 ITGA6P23229 1130 aa25■■□□□ 1.59
TNFRSF25-203ENST00000351959 HOXA10P31260 410 aaPredicted RBP25■■□□□ 1.59
TNFRSF25-203ENST00000351959 TGFB2P61812 414 aa25■■□□□ 1.59
TNFRSF25-203ENST00000351959 POLA2Q14181 598 aa25■■□□□ 1.59
TNFRSF25-203ENST00000351959 DDX46Q7L014 1031 aaKnown RBP25■■□□□ 1.59
TNFRSF25-203ENST00000351959 C2CD5Q86YS7 1000 aa25■■□□□ 1.59
TNFRSF25-203ENST00000351959 LAMB2P55268 1798 aa24.99■■□□□ 1.59
TNFRSF25-203ENST00000351959 NPR1P16066 1061 aa24.99■■□□□ 1.59
TNFRSF25-203ENST00000351959 RBM17Q96I25 401 aaKnown RBP24.99■■□□□ 1.59
TNFRSF25-203ENST00000351959 MASTLQ96GX5 879 aa24.98■■□□□ 1.59
TNFRSF25-203ENST00000351959 SEC31BQ9NQW1 1179 aa24.98■■□□□ 1.59
TNFRSF25-203ENST00000351959 PPP1R1BQ9UD71 204 aaPredicted RBP24.98■■□□□ 1.59
TNFRSF25-203ENST00000351959 RFX5P48382 616 aaPredicted RBP24.97■■□□□ 1.59
TNFRSF25-203ENST00000351959 CRAMP1Q96RY5 1269 aa24.97■■□□□ 1.59
TNFRSF25-203ENST00000351959 CDC5LQ99459 802 aaKnown RBP24.97■■□□□ 1.59
TNFRSF25-203ENST00000351959 RWDD1Q9H446 243 aaPredicted RBP24.96■■□□□ 1.59
TNFRSF25-203ENST00000351959 TNRC6CQ9HCJ0 1690 aaKnown RBP24.96■■□□□ 1.59
TNFRSF25-203ENST00000351959 ANKRD31Q8N7Z5 1873 aa24.96■■□□□ 1.59
TNFRSF25-203ENST00000351959 CHRNA5P30532 468 aa24.95■■□□□ 1.59
TNFRSF25-203ENST00000351959 ALDH1B1P30837 517 aa24.95■■□□□ 1.59
TNFRSF25-203ENST00000351959 HDAC1Q13547 482 aaPredicted RBP24.95■■□□□ 1.59
TNFRSF25-203ENST00000351959 TAF7LQ5H9L4 462 aa24.95■■□□□ 1.59
TNFRSF25-203ENST00000351959 STYK1Q6J9G0 422 aa24.95■■□□□ 1.59
TNFRSF25-203ENST00000351959 KLHL34Q8N239 644 aa24.95■■□□□ 1.59
TNFRSF25-203ENST00000351959 COPRSQ9NQ92 184 aa24.95■■□□□ 1.59
TNFRSF25-203ENST00000351959 MYH3P11055 1940 aa24.95■■□□□ 1.58
TNFRSF25-203ENST00000351959 RPS8P62241 208 aaKnown RBP24.95■■□□□ 1.58
TNFRSF25-203ENST00000351959 PTPN12Q05209 780 aaKnown RBP24.95■■□□□ 1.58
TNFRSF25-203ENST00000351959 DPEP1P16444 411 aa24.94■■□□□ 1.58
TNFRSF25-203ENST00000351959 GRAPQ13588 217 aa24.94■■□□□ 1.58
TNFRSF25-203ENST00000351959 ANKRD18AQ8IVF6 992 aa24.94■■□□□ 1.58
TNFRSF25-203ENST00000351959 GRAPLQ8TC17 118 aaPredicted RBP24.94■■□□□ 1.58
TNFRSF25-203ENST00000351959 ZNF622Q969S3 477 aaKnown RBP eCLIP24.94■■□□□ 1.58
TNFRSF25-203ENST00000351959 PPP4R2Q9NY27 417 aa24.94■■□□□ 1.58
TNFRSF25-203ENST00000351959 A0A0G2JLW4 131 aa24.93■■□□□ 1.58
TNFRSF25-203ENST00000351959 BBOX1O75936 387 aa24.93■■□□□ 1.58
TNFRSF25-203ENST00000351959 IGHMBP2P38935 993 aaKnown RBP24.93■■□□□ 1.58
TNFRSF25-203ENST00000351959 CELF1Q92879 486 aaKnown RBP24.93■■□□□ 1.58
TNFRSF25-203ENST00000351959 CNKSR1Q969H4 720 aa24.93■■□□□ 1.58
TNFRSF25-203ENST00000351959 ZNF594Q96JF6 807 aaPredicted RBP24.93■■□□□ 1.58
TNFRSF25-203ENST00000351959 KLHDC4Q8TBB5 520 aa24.92■■□□□ 1.58
TNFRSF25-203ENST00000351959 FBXO3Q9UK99 471 aa24.92■■□□□ 1.58
TNFRSF25-203ENST00000351959 KIF13BQ9NQT8 1826 aa24.92■■□□□ 1.58
TNFRSF25-203ENST00000351959 SURF6O75683 361 aaKnown RBP24.91■■□□□ 1.58
TNFRSF25-203ENST00000351959 KCNA3P22001 575 aa24.91■■□□□ 1.58
TNFRSF25-203ENST00000351959 LDHAL6AQ6ZMR3 332 aa24.91■■□□□ 1.58
TNFRSF25-203ENST00000351959 MPHOSPH8Q99549 860 aa24.91■■□□□ 1.58
TNFRSF25-203ENST00000351959 FHDC1Q9C0D6 1143 aaPredicted RBP24.91■■□□□ 1.58
TNFRSF25-203ENST00000351959 PA2G4Q9UQ80 394 aaKnown RBP24.91■■□□□ 1.58
TNFRSF25-203ENST00000351959 NOP58Q9Y2X3 529 aaKnown RBP24.91■■□□□ 1.58
TNFRSF25-203ENST00000351959 IGHDP01880 384 aa24.9■■□□□ 1.58
TNFRSF25-203ENST00000351959 DCTPP1Q9H773 170 aa24.9■■□□□ 1.58
TNFRSF25-203ENST00000351959 BSDC1Q9NW68 430 aaPredicted RBP24.9■■□□□ 1.58
TNFRSF25-203ENST00000351959 G3BP1Q13283 466 aaKnown RBP eCLIP24.89■■□□□ 1.58
TNFRSF25-203ENST00000351959 HSP90AB4PQ58FF6 505 aa24.89■■□□□ 1.58
TNFRSF25-203ENST00000351959 CCDC136Q96JN2 1154 aa24.89■■□□□ 1.58
TNFRSF25-203ENST00000351959 EYA2O00167 538 aa24.88■■□□□ 1.57
TNFRSF25-203ENST00000351959 CIAO1O76071 339 aa24.88■■□□□ 1.57
TNFRSF25-203ENST00000351959 TMC4Q7Z404 712 aa24.88■■□□□ 1.57
TNFRSF25-203ENST00000351959 PIM2Q9P1W9 311 aa24.88■■□□□ 1.57
TNFRSF25-203ENST00000351959 TTLL6Q8N841 843 aa24.87■■□□□ 1.57
TNFRSF25-203ENST00000351959 SYT17Q9BSW7 474 aa24.87■■□□□ 1.57
TNFRSF25-203ENST00000351959 PUS3Q9BZE2 481 aaKnown RBP24.87■■□□□ 1.57
TNFRSF25-203ENST00000351959 SIL1Q9H173 461 aa24.87■■□□□ 1.57
TNFRSF25-203ENST00000351959 CNNM1Q9NRU3 951 aa24.87■■□□□ 1.57
TNFRSF25-203ENST00000351959 GCC1Q96CN9 775 aa24.86■■□□□ 1.57
TNFRSF25-203ENST00000351959 RIPOR2Q9Y4F9 1068 aa24.86■■□□□ 1.57
TNFRSF25-203ENST00000351959 GTF3C3Q9Y5Q9 886 aa24.86■■□□□ 1.57
TNFRSF25-203ENST00000351959 IL15P40933 162 aaPredicted RBP24.86■■□□□ 1.57
TNFRSF25-203ENST00000351959 LRRC24Q50LG9 513 aa24.86■■□□□ 1.57
TNFRSF25-203ENST00000351959 NLGN2Q8NFZ4 835 aa24.86■■□□□ 1.57
TNFRSF25-203ENST00000351959 EXOC6BQ9Y2D4 811 aa24.86■■□□□ 1.57
TNFRSF25-203ENST00000351959 PPEF1O14829 653 aaPredicted RBP24.85■■□□□ 1.57
TNFRSF25-203ENST00000351959 RAB11FIP3O75154 756 aa24.85■■□□□ 1.57
TNFRSF25-203ENST00000351959 OS9Q13438 667 aaPredicted RBP24.85■■□□□ 1.57
TNFRSF25-203ENST00000351959 PRPF40BQ6NWY9 871 aaKnown RBP24.85■■□□□ 1.57
TNFRSF25-203ENST00000351959 ATG9AQ7Z3C6 839 aa24.85■■□□□ 1.57
TNFRSF25-203ENST00000351959 COL11A2P13942 1736 aaPredicted RBP24.84■■□□□ 1.57
TNFRSF25-203ENST00000351959 ERC1Q8IUD2 1116 aa24.84■■□□□ 1.57
TNFRSF25-203ENST00000351959 SP8Q8IXZ3 490 aa24.84■■□□□ 1.57
TNFRSF25-203ENST00000351959 MINPP1Q9UNW1 487 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms