RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 MCCP23508 829 aa8.4□□□□□ -1.06
TRIM55-203ENST00000350034 CRKLP46109 303 aaKnown RBP8.4□□□□□ -1.06
TRIM55-203ENST00000350034 TICAM2Q86XR7 235 aa8.4□□□□□ -1.06
TRIM55-203ENST00000350034 DZIP3Q86Y13 1208 aaKnown RBP8.4□□□□□ -1.06
TRIM55-203ENST00000350034 RUFY2Q8WXA3 655 aa8.4□□□□□ -1.06
TRIM55-203ENST00000350034 ACSBG1Q96GR2 724 aa8.4□□□□□ -1.06
TRIM55-203ENST00000350034 NGLY1Q96IV0 654 aa8.4□□□□□ -1.06
TRIM55-203ENST00000350034 ANO2Q9NQ90 1003 aa8.4□□□□□ -1.06
TRIM55-203ENST00000350034 PALD1Q9ULE6 856 aa8.4□□□□□ -1.06
TRIM55-203ENST00000350034 CCDC9Q9Y3X0 531 aaKnown RBP8.4□□□□□ -1.06
TRIM55-203ENST00000350034 RGL2O15211 777 aa8.39□□□□□ -1.07
TRIM55-203ENST00000350034 KCNQ2O43526 872 aa8.39□□□□□ -1.07
TRIM55-203ENST00000350034 CAMTA2O94983 1202 aa8.39□□□□□ -1.07
TRIM55-203ENST00000350034 ATP6V1AP38606 617 aa8.39□□□□□ -1.07
TRIM55-203ENST00000350034 FAM98CQ17RN3 349 aaKnown RBP8.39□□□□□ -1.07
TRIM55-203ENST00000350034 LRRC24Q50LG9 513 aa8.39□□□□□ -1.07
TRIM55-203ENST00000350034 RTL5Q5HYW3 569 aaPredicted RBP8.39□□□□□ -1.07
TRIM55-203ENST00000350034 FAM89AQ96GI7 184 aa8.39□□□□□ -1.07
TRIM55-203ENST00000350034 AK7Q96M32 723 aa8.39□□□□□ -1.07
TRIM55-203ENST00000350034 C8orf37Q96NL8 207 aa8.39□□□□□ -1.07
TRIM55-203ENST00000350034 HAUS7Q99871 368 aa8.39□□□□□ -1.07
TRIM55-203ENST00000350034 DBNDD2Q9BQY9 259 aa8.39□□□□□ -1.07
TRIM55-203ENST00000350034 BOLA2Q9H3K6 86 aa8.39□□□□□ -1.07
TRIM55-203ENST00000350034 DIAPH3Q9NSV4 1193 aa8.39□□□□□ -1.07
TRIM55-203ENST00000350034 ZNF330Q9Y3S2 320 aaPredicted RBP8.39□□□□□ -1.07
TRIM55-203ENST00000350034 ZNF831Q5JPB2 1677 aa8.39□□□□□ -1.07
TRIM55-203ENST00000350034 ZNF609O15014 1411 aa8.38□□□□□ -1.07
TRIM55-203ENST00000350034 MED23Q9ULK4 1368 aa8.38□□□□□ -1.07
TRIM55-203ENST00000350034 UBN2Q6ZU65 1347 aa8.38□□□□□ -1.07
TRIM55-203ENST00000350034 THSD7AQ9UPZ6 1657 aa8.38□□□□□ -1.07
TRIM55-203ENST00000350034 ST18O60284 1047 aa8.38□□□□□ -1.07
TRIM55-203ENST00000350034 FRAT2O75474 233 aaPredicted RBP8.38□□□□□ -1.07
TRIM55-203ENST00000350034 MCM2P49736 904 aa8.38□□□□□ -1.07
TRIM55-203ENST00000350034 CCDC57Q2TAC2 916 aa8.38□□□□□ -1.07
TRIM55-203ENST00000350034 CWC27Q6UX04 472 aaKnown RBP8.38□□□□□ -1.07
TRIM55-203ENST00000350034 TTLL11Q8NHH1 800 aa8.38□□□□□ -1.07
TRIM55-203ENST00000350034 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.38□□□□□ -1.07
TRIM55-203ENST00000350034 ZNF594Q96JF6 807 aaPredicted RBP8.38□□□□□ -1.07
TRIM55-203ENST00000350034 PUS3Q9BZE2 481 aaKnown RBP8.38□□□□□ -1.07
TRIM55-203ENST00000350034 TBC1D2BQ9UPU7 963 aa8.38□□□□□ -1.07
TRIM55-203ENST00000350034 CHMP3Q9Y3E7 222 aa8.38□□□□□ -1.07
TRIM55-203ENST00000350034 IRS4O14654 1257 aaPredicted RBP8.37□□□□□ -1.07
TRIM55-203ENST00000350034 ONECUT3O60422 494 aaPredicted RBP8.37□□□□□ -1.07
TRIM55-203ENST00000350034 PDE8AO60658 829 aa8.37□□□□□ -1.07
TRIM55-203ENST00000350034 GPTP24298 496 aa8.37□□□□□ -1.07
TRIM55-203ENST00000350034 CTSWP56202 376 aa8.37□□□□□ -1.07
TRIM55-203ENST00000350034 PTH1RQ03431 593 aa8.37□□□□□ -1.07
TRIM55-203ENST00000350034 NMIQ13287 307 aaPredicted RBP8.37□□□□□ -1.07
TRIM55-203ENST00000350034 RAB3GAP1Q15042 981 aa8.37□□□□□ -1.07
TRIM55-203ENST00000350034 PARP10Q53GL7 1025 aa8.37□□□□□ -1.07
TRIM55-203ENST00000350034 KIAA1211Q6ZU35 1233 aa8.37□□□□□ -1.07
TRIM55-203ENST00000350034 SYNE4Q8N205 404 aa8.37□□□□□ -1.07
TRIM55-203ENST00000350034 SPRYD3Q8NCJ5 442 aa8.37□□□□□ -1.07
TRIM55-203ENST00000350034 CEP126Q9P2H0 1117 aa8.37□□□□□ -1.07
TRIM55-203ENST00000350034 USP21Q9UK80 565 aa8.37□□□□□ -1.07
TRIM55-203ENST00000350034 RIPOR2Q9Y4F9 1068 aa8.37□□□□□ -1.07
TRIM55-203ENST00000350034 SNX14Q9Y5W7 946 aa8.37□□□□□ -1.07
TRIM55-203ENST00000350034 CCDC171Q6TFL3 1326 aa8.36□□□□□ -1.07
TRIM55-203ENST00000350034 CNTNAP4Q9C0A0 1308 aa8.36□□□□□ -1.07
TRIM55-203ENST00000350034 ANKRD36CQ5JPF3 1778 aa8.36□□□□□ -1.07
TRIM55-203ENST00000350034 NEK4P51957 841 aa8.36□□□□□ -1.07
TRIM55-203ENST00000350034 IFIT5Q13325 482 aaKnown RBP8.36□□□□□ -1.07
TRIM55-203ENST00000350034 CUL4AQ13619 759 aa8.36□□□□□ -1.07
TRIM55-203ENST00000350034 NECTIN1Q15223 517 aa8.36□□□□□ -1.07
TRIM55-203ENST00000350034 RC3H1Q5TC82 1133 aaKnown RBP8.36□□□□□ -1.07
TRIM55-203ENST00000350034 SUSD4Q5VX71 490 aa8.36□□□□□ -1.07
TRIM55-203ENST00000350034 CLEC17AQ6ZS10 378 aa8.36□□□□□ -1.07
TRIM55-203ENST00000350034 RASEFQ8IZ41 740 aa8.36□□□□□ -1.07
TRIM55-203ENST00000350034 TNS4Q8IZW8 715 aa8.36□□□□□ -1.07
TRIM55-203ENST00000350034 MAP4K1Q92918 833 aa8.36□□□□□ -1.07
TRIM55-203ENST00000350034 FAM227BQ96M60 508 aa8.36□□□□□ -1.07
TRIM55-203ENST00000350034 TTC14Q96N46 770 aa8.36□□□□□ -1.07
TRIM55-203ENST00000350034 FSD1Q9BTV5 496 aa8.36□□□□□ -1.07
TRIM55-203ENST00000350034 TM6SF1Q9BZW5 370 aa8.36□□□□□ -1.07
TRIM55-203ENST00000350034 CWC22Q9HCG8 908 aaKnown RBP8.36□□□□□ -1.07
TRIM55-203ENST00000350034 TRMT112Q9UI30 125 aaKnown RBP8.36□□□□□ -1.07
TRIM55-203ENST00000350034 AKAP2Q9Y2D5 859 aa8.36□□□□□ -1.07
TRIM55-203ENST00000350034 ATRNO75882 1429 aa8.36□□□□□ -1.07
TRIM55-203ENST00000350034 RIC1Q4ADV7 1423 aa8.36□□□□□ -1.07
TRIM55-203ENST00000350034 RTL9Q8NET4 1388 aa8.35□□□□□ -1.07
TRIM55-203ENST00000350034 A0A0D9SFI3 127 aa8.35□□□□□ -1.07
TRIM55-203ENST00000350034 A0A1B0GUL7 405 aa8.35□□□□□ -1.07
TRIM55-203ENST00000350034 ANKRD18BA2A2Z9 1011 aa8.35□□□□□ -1.07
TRIM55-203ENST00000350034 CYP2E1P05181 493 aaPredicted RBP8.35□□□□□ -1.07
TRIM55-203ENST00000350034 ITGA6P23229 1130 aa8.35□□□□□ -1.07
TRIM55-203ENST00000350034 MCM4P33991 863 aa8.35□□□□□ -1.07
TRIM55-203ENST00000350034 TIMM10P62072 90 aa8.35□□□□□ -1.07
TRIM55-203ENST00000350034 TSGA10IPQ3SY00 556 aa8.35□□□□□ -1.07
TRIM55-203ENST00000350034 COL13A1Q5TAT6 717 aaPredicted RBP8.35□□□□□ -1.07
TRIM55-203ENST00000350034 USPL1Q5W0Q7 1092 aa8.35□□□□□ -1.07
TRIM55-203ENST00000350034 CLEC4GQ6UXB4 293 aa8.35□□□□□ -1.07
TRIM55-203ENST00000350034 VGLL2Q8N8G2 317 aa8.35□□□□□ -1.07
TRIM55-203ENST00000350034 KBTBD3Q8NAB2 608 aa8.35□□□□□ -1.07
TRIM55-203ENST00000350034 LINC00116Q8NCU8 138 aa8.35□□□□□ -1.07
TRIM55-203ENST00000350034 EDC3Q96F86 508 aaKnown RBP8.35□□□□□ -1.07
TRIM55-203ENST00000350034 TMX3Q96JJ7 454 aa8.35□□□□□ -1.07
TRIM55-203ENST00000350034 GJD4Q96KN9 370 aaPredicted RBP8.35□□□□□ -1.07
TRIM55-203ENST00000350034 ARXQ96QS3 562 aa8.35□□□□□ -1.07
TRIM55-203ENST00000350034 UTP14AQ9BVJ6 771 aaKnown RBP8.35□□□□□ -1.07
TRIM55-203ENST00000350034 GREM2Q9H772 168 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms