RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 CCDC57Q2TAC2 916 aa20.08■□□□□ 0.81
SAMM50-201ENST00000350028 L1TD1Q5T7N2 865 aaKnown RBP20.08■□□□□ 0.81
SAMM50-201ENST00000350028 PRPF40BQ6NWY9 871 aaKnown RBP20.08■□□□□ 0.81
SAMM50-201ENST00000350028 RBM8AQ9Y5S9 174 aaKnown RBP20.08■□□□□ 0.81
SAMM50-201ENST00000350028 CDHR2Q9BYE9 1310 aa20.08■□□□□ 0.8
SAMM50-201ENST00000350028 A0A0D9SFI3 127 aa20.07■□□□□ 0.8
SAMM50-201ENST00000350028 DDB1Q16531 1140 aa20.07■□□□□ 0.8
SAMM50-201ENST00000350028 SYTL4Q96C24 671 aaPredicted RBP20.07■□□□□ 0.8
SAMM50-201ENST00000350028 DOT1LQ8TEK3 1739 aa20.07■□□□□ 0.8
SAMM50-201ENST00000350028 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.07■□□□□ 0.8
SAMM50-201ENST00000350028 CSF1RP07333 972 aa20.07■□□□□ 0.8
SAMM50-201ENST00000350028 KCNJ4P48050 445 aa20.07■□□□□ 0.8
SAMM50-201ENST00000350028 NOL8Q76FK4 1167 aaKnown RBP20.07■□□□□ 0.8
SAMM50-201ENST00000350028 ZSWIM6Q9HCJ5 1215 aa20.07■□□□□ 0.8
SAMM50-201ENST00000350028 LIMCH1Q9UPQ0 1083 aa20.07■□□□□ 0.8
SAMM50-201ENST00000350028 ZDHHC9Q9Y397 364 aa20.07■□□□□ 0.8
SAMM50-201ENST00000350028 IL6STP40189 918 aaPredicted RBP20.06■□□□□ 0.8
SAMM50-201ENST00000350028 PKP1Q13835 747 aa20.06■□□□□ 0.8
SAMM50-201ENST00000350028 LRRC24Q50LG9 513 aa20.06■□□□□ 0.8
SAMM50-201ENST00000350028 VPS53Q5VIR6 699 aa20.06■□□□□ 0.8
SAMM50-201ENST00000350028 RNF20Q5VTR2 975 aa20.06■□□□□ 0.8
SAMM50-201ENST00000350028 CREB3L3Q68CJ9 461 aa20.06■□□□□ 0.8
SAMM50-201ENST00000350028 NEUROD6Q96NK8 337 aa20.06■□□□□ 0.8
SAMM50-201ENST00000350028 ARXQ96QS3 562 aa20.06■□□□□ 0.8
SAMM50-201ENST00000350028 ANKRD36CQ5JPF3 1778 aa20.05■□□□□ 0.8
SAMM50-201ENST00000350028 ERVV-1B6SEH8 477 aa20.05■□□□□ 0.8
SAMM50-201ENST00000350028 CASTP20810 708 aaKnown RBP20.05■□□□□ 0.8
SAMM50-201ENST00000350028 AK2P54819 239 aa20.05■□□□□ 0.8
SAMM50-201ENST00000350028 ZNF594Q96JF6 807 aaPredicted RBP20.05■□□□□ 0.8
SAMM50-201ENST00000350028 JAKMIP1Q96N16 626 aaKnown RBP20.05■□□□□ 0.8
SAMM50-201ENST00000350028 CEP126Q9P2H0 1117 aa20.05■□□□□ 0.8
SAMM50-201ENST00000350028 CYP46A1Q9Y6A2 500 aa20.05■□□□□ 0.8
SAMM50-201ENST00000350028 ZNF609O15014 1411 aa20.05■□□□□ 0.8
SAMM50-201ENST00000350028 KAT6BQ8WYB5 2073 aa20.05■□□□□ 0.8
SAMM50-201ENST00000350028 PSMA5P28066 241 aa20.05■□□□□ 0.8
SAMM50-201ENST00000350028 HLFQ16534 295 aa20.05■□□□□ 0.8
SAMM50-201ENST00000350028 NLRP10Q86W26 655 aa20.05■□□□□ 0.8
SAMM50-201ENST00000350028 EDC3Q96F86 508 aaKnown RBP20.05■□□□□ 0.8
SAMM50-201ENST00000350028 FAM89AQ96GI7 184 aa20.05■□□□□ 0.8
SAMM50-201ENST00000350028 DNAJC2Q99543 621 aaKnown RBP20.05■□□□□ 0.8
SAMM50-201ENST00000350028 GZF1Q9H116 711 aaPredicted RBP20.05■□□□□ 0.8
SAMM50-201ENST00000350028 PDRG1Q9NUG6 133 aa20.05■□□□□ 0.8
SAMM50-201ENST00000350028 ZBTB1Q9Y2K1 713 aa20.05■□□□□ 0.8
SAMM50-201ENST00000350028 KBTBD3Q8NAB2 608 aa20.04■□□□□ 0.8
SAMM50-201ENST00000350028 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.04■□□□□ 0.8
SAMM50-201ENST00000350028 ZSCAN31Q96LW9 406 aaPredicted RBP20.04■□□□□ 0.8
SAMM50-201ENST00000350028 AKAP2Q9Y2D5 859 aa20.04■□□□□ 0.8
SAMM50-201ENST00000350028 SPATA31A5Q5VU36 1347 aa20.04■□□□□ 0.8
SAMM50-201ENST00000350028 SPATA31A7Q8IWB4 1347 aa20.04■□□□□ 0.8
SAMM50-201ENST00000350028 SLC27A2O14975 620 aa20.03■□□□□ 0.8
SAMM50-201ENST00000350028 BRD1O95696 1058 aa20.03■□□□□ 0.8
SAMM50-201ENST00000350028 TIMM10P62072 90 aa20.03■□□□□ 0.8
SAMM50-201ENST00000350028 MCTP1Q6DN14 999 aa20.03■□□□□ 0.8
SAMM50-201ENST00000350028 RUFY3Q7L099 469 aa20.03■□□□□ 0.8
SAMM50-201ENST00000350028 HMG20BQ9P0W2 317 aa20.03■□□□□ 0.8
SAMM50-201ENST00000350028 PALLDQ8WX93 1383 aa20.03■□□□□ 0.8
SAMM50-201ENST00000350028 FSD2A1L4K1 749 aa20.02■□□□□ 0.8
SAMM50-201ENST00000350028 GOLGA6L3A6NEY3 463 aa20.02■□□□□ 0.8
SAMM50-201ENST00000350028 TAF5LO75529 589 aa20.02■□□□□ 0.8
SAMM50-201ENST00000350028 IFIT5Q13325 482 aaKnown RBP20.02■□□□□ 0.8
SAMM50-201ENST00000350028 ADCK5Q3MIX3 580 aa20.02■□□□□ 0.8
SAMM50-201ENST00000350028 MEX3CQ5U5Q3 659 aaKnown RBP20.02■□□□□ 0.8
SAMM50-201ENST00000350028 BARGINQ6ZT62 677 aa20.02■□□□□ 0.8
SAMM50-201ENST00000350028 PUS3Q9BZE2 481 aaKnown RBP20.02■□□□□ 0.8
SAMM50-201ENST00000350028 ISY1Q9ULR0 285 aaKnown RBP20.02■□□□□ 0.8
SAMM50-201ENST00000350028 AFF2P51816 1311 aa20.02■□□□□ 0.8
SAMM50-201ENST00000350028 A0A1B0GUL7 405 aa20.02■□□□□ 0.79
SAMM50-201ENST00000350028 TSGA10IPQ3SY00 556 aa20.02■□□□□ 0.79
SAMM50-201ENST00000350028 MCMDC2Q4G0Z9 681 aa20.02■□□□□ 0.79
SAMM50-201ENST00000350028 TAF7LQ5H9L4 462 aa20.02■□□□□ 0.79
SAMM50-201ENST00000350028 USPL1Q5W0Q7 1092 aa20.02■□□□□ 0.79
SAMM50-201ENST00000350028 USP21Q9UK80 565 aa20.02■□□□□ 0.79
SAMM50-201ENST00000350028 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.02■□□□□ 0.79
SAMM50-201ENST00000350028 NUP98P52948 1817 aa20.01■□□□□ 0.79
SAMM50-201ENST00000350028 SPEF2Q9C093 1822 aa20.01■□□□□ 0.79
SAMM50-201ENST00000350028 KLHL40Q2TBA0 621 aa20.01■□□□□ 0.79
SAMM50-201ENST00000350028 ZNF589Q86UQ0 364 aaPredicted RBP20.01■□□□□ 0.79
SAMM50-201ENST00000350028 DZIP3Q86Y13 1208 aaKnown RBP20.01■□□□□ 0.79
SAMM50-201ENST00000350028 SH2B1Q9NRF2 756 aaPredicted RBP20.01■□□□□ 0.79
SAMM50-201ENST00000350028 PAG1Q9NWQ8 432 aa20.01■□□□□ 0.79
SAMM50-201ENST00000350028 RPAP1Q9BWH6 1393 aaPredicted RBP20.01■□□□□ 0.79
SAMM50-201ENST00000350028 GPTP24298 496 aa20■□□□□ 0.79
SAMM50-201ENST00000350028 DDX46Q7L014 1031 aaKnown RBP20■□□□□ 0.79
SAMM50-201ENST00000350028 ALDH8A1Q9H2A2 487 aaPredicted RBP20■□□□□ 0.79
SAMM50-201ENST00000350028 IFIT1P09914 478 aaKnown RBP19.99■□□□□ 0.79
SAMM50-201ENST00000350028 VPS72Q15906 364 aa19.99■□□□□ 0.79
SAMM50-201ENST00000350028 MARCH10Q8NA82 808 aaPredicted RBP19.99■□□□□ 0.79
SAMM50-201ENST00000350028 HELLSQ9NRZ9 838 aa19.99■□□□□ 0.79
SAMM50-201ENST00000350028 LMBRD1Q9NUN5 540 aa19.99■□□□□ 0.79
SAMM50-201ENST00000350028 U3KPZ7 1027 aaPredicted RBP19.99■□□□□ 0.79
SAMM50-201ENST00000350028 SH3TC1Q8TE82 1336 aa19.99■□□□□ 0.79
SAMM50-201ENST00000350028 CPA1P15085 419 aa19.99■□□□□ 0.79
SAMM50-201ENST00000350028 KRT32Q14532 448 aa19.99■□□□□ 0.79
SAMM50-201ENST00000350028 TTLL11Q8NHH1 800 aa19.99■□□□□ 0.79
SAMM50-201ENST00000350028 NDUFB9Q9Y6M9 179 aa19.99■□□□□ 0.79
SAMM50-201ENST00000350028 DDX49Q9Y6V7 483 aaKnown RBP19.99■□□□□ 0.79
SAMM50-201ENST00000350028 WDR33Q9C0J8 1336 aaKnown RBP19.99■□□□□ 0.79
SAMM50-201ENST00000350028 GOLIM4O00461 696 aa19.98■□□□□ 0.79
SAMM50-201ENST00000350028 EIF5P55010 431 aaKnown RBP19.98■□□□□ 0.79
SAMM50-201ENST00000350028 CTSWP56202 376 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms