RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 GLIS2Q9BZE0 524 aaPredicted RBP12.69□□□□□ -0.38
MRPL55-204ENST00000348259 TSKSQ9UJT2 592 aa12.69□□□□□ -0.38
MRPL55-204ENST00000348259 ZNRF3Q9ULT6 936 aa12.69□□□□□ -0.38
MRPL55-204ENST00000348259 PPIP5K2O43314 1243 aa12.68□□□□□ -0.38
MRPL55-204ENST00000348259 GMPSP49915 693 aaPredicted RBP12.68□□□□□ -0.38
MRPL55-204ENST00000348259 KIAA2012Q0VF49 1180 aa12.68□□□□□ -0.38
MRPL55-204ENST00000348259 ZC3H15Q8WU90 426 aaKnown RBP12.68□□□□□ -0.38
MRPL55-204ENST00000348259 MCOLN1Q9GZU1 580 aa12.68□□□□□ -0.38
MRPL55-204ENST00000348259 ZBTB3Q9H5J0 574 aa12.68□□□□□ -0.38
MRPL55-204ENST00000348259 SCN9AQ15858 1988 aa12.67□□□□□ -0.38
MRPL55-204ENST00000348259 CCDC85CA6NKD9 419 aa12.67□□□□□ -0.38
MRPL55-204ENST00000348259 YDJCA8MPS7 323 aa12.67□□□□□ -0.38
MRPL55-204ENST00000348259 CELF2O95319 508 aaKnown RBP12.67□□□□□ -0.38
MRPL55-204ENST00000348259 PARP10Q53GL7 1025 aa12.67□□□□□ -0.38
MRPL55-204ENST00000348259 KIF6Q6ZMV9 814 aa12.67□□□□□ -0.38
MRPL55-204ENST00000348259 NGEFQ8N5V2 710 aa12.67□□□□□ -0.38
MRPL55-204ENST00000348259 TRPM4Q8TD43 1214 aa12.67□□□□□ -0.38
MRPL55-204ENST00000348259 ZIC5Q96T25 663 aa12.67□□□□□ -0.38
MRPL55-204ENST00000348259 RRP7AQ9Y3A4 280 aaKnown RBP12.67□□□□□ -0.38
MRPL55-204ENST00000348259 PSME4Q14997 1843 aa12.67□□□□□ -0.38
MRPL55-204ENST00000348259 SHTN1A0MZ66 631 aa12.66□□□□□ -0.38
MRPL55-204ENST00000348259 MYL6BP14649 208 aa12.66□□□□□ -0.38
MRPL55-204ENST00000348259 SP8Q8IXZ3 490 aa12.66□□□□□ -0.38
MRPL55-204ENST00000348259 BEGAINQ9BUH8 593 aa12.66□□□□□ -0.38
MRPL55-204ENST00000348259 AKAP11Q9UKA4 1901 aa12.65□□□□□ -0.38
MRPL55-204ENST00000348259 FAM155AB1AL88 458 aaPredicted RBP12.65□□□□□ -0.38
MRPL55-204ENST00000348259 WDR43Q15061 677 aaKnown RBP eCLIP12.65□□□□□ -0.38
MRPL55-204ENST00000348259 PROSER3Q2NL68 480 aa12.65□□□□□ -0.38
MRPL55-204ENST00000348259 PPP1R42Q7Z4L9 355 aa12.65□□□□□ -0.38
MRPL55-204ENST00000348259 SUPT20HQ8NEM7 779 aa12.65□□□□□ -0.38
MRPL55-204ENST00000348259 NLRP3Q96P20 1036 aa12.65□□□□□ -0.38
MRPL55-204ENST00000348259 THUMPD2Q9BTF0 503 aaKnown RBP12.65□□□□□ -0.38
MRPL55-204ENST00000348259 PCDH10Q9P2E7 1040 aa12.65□□□□□ -0.38
MRPL55-204ENST00000348259 ADAMTS8Q9UP79 889 aa12.65□□□□□ -0.38
MRPL55-204ENST00000348259 TCERG1O14776 1098 aaKnown RBP12.64□□□□□ -0.39
MRPL55-204ENST00000348259 BBOX1O75936 387 aa12.64□□□□□ -0.39
MRPL55-204ENST00000348259 GRM1Q13255 1194 aa12.64□□□□□ -0.39
MRPL55-204ENST00000348259 NFE2L2Q16236 605 aa12.64□□□□□ -0.39
MRPL55-204ENST00000348259 CIAPIN1Q6FI81 312 aa12.64□□□□□ -0.39
MRPL55-204ENST00000348259 PAXIP1Q6ZW49 1069 aaPredicted RBP12.64□□□□□ -0.39
MRPL55-204ENST00000348259 ZNF646O15015 1829 aaPredicted RBP12.64□□□□□ -0.39
MRPL55-204ENST00000348259 NOGQ13253 232 aa12.63□□□□□ -0.39
MRPL55-204ENST00000348259 CDC37L1Q7L3B6 337 aa12.63□□□□□ -0.39
MRPL55-204ENST00000348259 NLRP10Q86W26 655 aa12.63□□□□□ -0.39
MRPL55-204ENST00000348259 UTP14AQ9BVJ6 771 aaKnown RBP12.63□□□□□ -0.39
MRPL55-204ENST00000348259 RAD17O75943 681 aa12.62□□□□□ -0.39
MRPL55-204ENST00000348259 EGFRP00533 1210 aa12.62□□□□□ -0.39
MRPL55-204ENST00000348259 NCBP3Q53F19 620 aaKnown RBP12.62□□□□□ -0.39
MRPL55-204ENST00000348259 DLK2Q6UY11 383 aa12.62□□□□□ -0.39
MRPL55-204ENST00000348259 DPP8Q6V1X1 898 aaPredicted RBP12.62□□□□□ -0.39
MRPL55-204ENST00000348259 MPNDQ8N594 471 aa12.62□□□□□ -0.39
MRPL55-204ENST00000348259 HTTP42858 3142 aa12.62□□□□□ -0.39
MRPL55-204ENST00000348259 ZNF609O15014 1411 aa12.62□□□□□ -0.39
MRPL55-204ENST00000348259 RTL9Q8NET4 1388 aa12.61□□□□□ -0.39
MRPL55-204ENST00000348259 GRAPQ13588 217 aa12.61□□□□□ -0.39
MRPL55-204ENST00000348259 TNIP1Q15025 636 aa12.61□□□□□ -0.39
MRPL55-204ENST00000348259 GRAPLQ8TC17 118 aaPredicted RBP12.61□□□□□ -0.39
MRPL55-204ENST00000348259 DPF2Q92785 391 aa12.61□□□□□ -0.39
MRPL55-204ENST00000348259 SAGE1Q9NXZ1 904 aa12.61□□□□□ -0.39
MRPL55-204ENST00000348259 CNOT7Q9UIV1 285 aaKnown RBP12.61□□□□□ -0.39
MRPL55-204ENST00000348259 GTF3C3Q9Y5Q9 886 aa12.61□□□□□ -0.39
MRPL55-204ENST00000348259 ANXA1P04083 346 aa12.6□□□□□ -0.39
MRPL55-204ENST00000348259 HCLS1P14317 486 aaPredicted RBP12.6□□□□□ -0.39
MRPL55-204ENST00000348259 DGKZQ13574 1117 aa12.6□□□□□ -0.39
MRPL55-204ENST00000348259 MICALL2Q8IY33 904 aa12.6□□□□□ -0.39
MRPL55-204ENST00000348259 BABAM1Q9NWV8 329 aa12.6□□□□□ -0.39
MRPL55-204ENST00000348259 HUNKP57058 714 aa12.59□□□□□ -0.39
MRPL55-204ENST00000348259 TCIRG1Q13488 830 aa12.59□□□□□ -0.39
MRPL55-204ENST00000348259 TMC4Q7Z404 712 aa12.59□□□□□ -0.39
MRPL55-204ENST00000348259 USP48Q86UV5 1035 aa12.59□□□□□ -0.39
MRPL55-204ENST00000348259 ZBTB12Q9Y330 459 aaPredicted RBP12.59□□□□□ -0.39
MRPL55-204ENST00000348259 PSMD14O00487 310 aa12.58□□□□□ -0.4
MRPL55-204ENST00000348259 HSP90AB3PQ58FF7 597 aa12.58□□□□□ -0.4
MRPL55-204ENST00000348259 RGMBQ6NW40 437 aa12.58□□□□□ -0.4
MRPL55-204ENST00000348259 SAMD7Q7Z3H4 446 aa12.58□□□□□ -0.4
MRPL55-204ENST00000348259 BCL2L13Q9BXK5 485 aa12.58□□□□□ -0.4
MRPL55-204ENST00000348259 ZNF408Q9H9D4 720 aa12.58□□□□□ -0.4
MRPL55-204ENST00000348259 SH3TC1Q8TE82 1336 aa12.58□□□□□ -0.4
MRPL55-204ENST00000348259 PAPPA2Q9BXP8 1791 aa12.57□□□□□ -0.4
MRPL55-204ENST00000348259 SF3B3Q15393 1217 aaKnown RBP12.57□□□□□ -0.4
MRPL55-204ENST00000348259 DDX46Q7L014 1031 aaKnown RBP12.57□□□□□ -0.4
MRPL55-204ENST00000348259 COPS6Q7L5N1 327 aa12.57□□□□□ -0.4
MRPL55-204ENST00000348259 XAGE3Q8WTP9 111 aa12.57□□□□□ -0.4
MRPL55-204ENST00000348259 CELF1Q92879 486 aaKnown RBP12.57□□□□□ -0.4
MRPL55-204ENST00000348259 ISCA1Q9BUE6 129 aa12.57□□□□□ -0.4
MRPL55-204ENST00000348259 GBA2Q9HCG7 927 aaPredicted RBP12.57□□□□□ -0.4
MRPL55-204ENST00000348259 POLLQ9UGP5 575 aa12.57□□□□□ -0.4
MRPL55-204ENST00000348259 TSPYL4Q9UJ04 414 aa12.57□□□□□ -0.4
MRPL55-204ENST00000348259 MKI67P46013 3256 aaKnown RBP12.57□□□□□ -0.4
MRPL55-204ENST00000348259 LAMB1P07942 1786 aa12.56□□□□□ -0.4
MRPL55-204ENST00000348259 ADM5C9JUS6 153 aa12.56□□□□□ -0.4
MRPL55-204ENST00000348259 H7C1D1 291 aa12.56□□□□□ -0.4
MRPL55-204ENST00000348259 SLC10A3P09131 477 aa12.56□□□□□ -0.4
MRPL55-204ENST00000348259 RPS12P25398 132 aaKnown RBP12.56□□□□□ -0.4
MRPL55-204ENST00000348259 TMX4Q9H1E5 349 aaPredicted RBP12.56□□□□□ -0.4
MRPL55-204ENST00000348259 KCNQ5Q9NR82 932 aa12.56□□□□□ -0.4
MRPL55-204ENST00000348259 RNF186Q9NXI6 227 aa12.56□□□□□ -0.4
MRPL55-204ENST00000348259 EIF2S2P20042 333 aaKnown RBP12.55□□□□□ -0.4
MRPL55-204ENST00000348259 KIF23Q02241 960 aaPredicted RBP12.55□□□□□ -0.4
MRPL55-204ENST00000348259 TBC1D10BQ4KMP7 808 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms