RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 ISCA1Q9BUE6 129 aa20.65■□□□□ 0.9
SMARCC2-202ENST00000347471 USP21Q9UK80 565 aa20.65■□□□□ 0.9
SMARCC2-202ENST00000347471 NIP7Q9Y221 180 aaKnown RBP eCLIP20.65■□□□□ 0.9
SMARCC2-202ENST00000347471 ADCK5Q3MIX3 580 aa20.65■□□□□ 0.9
SMARCC2-202ENST00000347471 HSPA4P34932 840 aa20.65■□□□□ 0.9
SMARCC2-202ENST00000347471 CCDC87Q9NVE4 849 aa20.65■□□□□ 0.9
SMARCC2-202ENST00000347471 GOLGA6L22H0YM25 854 aa20.64■□□□□ 0.9
SMARCC2-202ENST00000347471 PI16Q6UXB8 463 aa20.64■□□□□ 0.9
SMARCC2-202ENST00000347471 ATG9AQ7Z3C6 839 aa20.64■□□□□ 0.9
SMARCC2-202ENST00000347471 VSIG10Q8N0Z9 540 aa20.64■□□□□ 0.9
SMARCC2-202ENST00000347471 ITPK1Q13572 414 aa20.64■□□□□ 0.89
SMARCC2-202ENST00000347471 ZBTB38Q8NAP3 1195 aaPredicted RBP20.64■□□□□ 0.89
SMARCC2-202ENST00000347471 STK3Q13188 491 aa20.63■□□□□ 0.89
SMARCC2-202ENST00000347471 MRC1P22897 1456 aa20.63■□□□□ 0.89
SMARCC2-202ENST00000347471 ANKRD18BA2A2Z9 1011 aa20.62■□□□□ 0.89
SMARCC2-202ENST00000347471 CCDC158Q5M9N0 1113 aa20.62■□□□□ 0.89
SMARCC2-202ENST00000347471 CDCA7Q9BWT1 371 aaPredicted RBP20.62■□□□□ 0.89
SMARCC2-202ENST00000347471 CCDC171Q6TFL3 1326 aa20.62■□□□□ 0.89
SMARCC2-202ENST00000347471 BCL9O00512 1426 aa20.62■□□□□ 0.89
SMARCC2-202ENST00000347471 SPATA31A5Q5VU36 1347 aa20.62■□□□□ 0.89
SMARCC2-202ENST00000347471 SPATA31A7Q8IWB4 1347 aa20.62■□□□□ 0.89
SMARCC2-202ENST00000347471 PCCAP05165 728 aaPredicted RBP20.62■□□□□ 0.89
SMARCC2-202ENST00000347471 PHF14O94880 888 aa20.61■□□□□ 0.89
SMARCC2-202ENST00000347471 AK2P54819 239 aa20.61■□□□□ 0.89
SMARCC2-202ENST00000347471 PPFIA3O75145 1194 aa20.61■□□□□ 0.89
SMARCC2-202ENST00000347471 LRRC2Q9BYS8 371 aa20.61■□□□□ 0.89
SMARCC2-202ENST00000347471 HIP1O00291 1037 aa20.61■□□□□ 0.89
SMARCC2-202ENST00000347471 ATP5JP18859 108 aa20.61■□□□□ 0.89
SMARCC2-202ENST00000347471 PDRG1Q9NUG6 133 aa20.61■□□□□ 0.89
SMARCC2-202ENST00000347471 PAG1Q9NWQ8 432 aa20.61■□□□□ 0.89
SMARCC2-202ENST00000347471 TAF5LO75529 589 aa20.6■□□□□ 0.89
SMARCC2-202ENST00000347471 RAB3GAP1Q15042 981 aa20.6■□□□□ 0.89
SMARCC2-202ENST00000347471 NECAB1Q8N987 351 aa20.6■□□□□ 0.89
SMARCC2-202ENST00000347471 MPHOSPH8Q99549 860 aa20.6■□□□□ 0.89
SMARCC2-202ENST00000347471 PALLDQ8WX93 1383 aa20.6■□□□□ 0.89
SMARCC2-202ENST00000347471 CCDC83Q8IWF9 413 aa20.6■□□□□ 0.89
SMARCC2-202ENST00000347471 CYP46A1Q9Y6A2 500 aa20.6■□□□□ 0.89
SMARCC2-202ENST00000347471 TAF6LQ9Y6J9 622 aa20.6■□□□□ 0.89
SMARCC2-202ENST00000347471 CREB3L3Q68CJ9 461 aa20.6■□□□□ 0.89
SMARCC2-202ENST00000347471 XAGE2Q96GT9 111 aa20.6■□□□□ 0.89
SMARCC2-202ENST00000347471 IQSEC3Q9UPP2 1182 aaPredicted RBP20.6■□□□□ 0.89
SMARCC2-202ENST00000347471 DDX11L8A8MPP1 907 aa20.59■□□□□ 0.89
SMARCC2-202ENST00000347471 CIZ1Q9ULV3 898 aaPredicted RBP20.59■□□□□ 0.89
SMARCC2-202ENST00000347471 KCPQ6ZWJ8 1503 aa20.59■□□□□ 0.89
SMARCC2-202ENST00000347471 SEC31BQ9NQW1 1179 aa20.59■□□□□ 0.89
SMARCC2-202ENST00000347471 DDX49Q9Y6V7 483 aaKnown RBP20.59■□□□□ 0.89
SMARCC2-202ENST00000347471 IL6STP40189 918 aaPredicted RBP20.59■□□□□ 0.89
SMARCC2-202ENST00000347471 ANAPC15P60006 121 aa20.59■□□□□ 0.89
SMARCC2-202ENST00000347471 ATP2B3Q16720 1220 aa20.59■□□□□ 0.89
SMARCC2-202ENST00000347471 SUSD4Q5VX71 490 aa20.59■□□□□ 0.89
SMARCC2-202ENST00000347471 TTLL11Q8NHH1 800 aa20.59■□□□□ 0.89
SMARCC2-202ENST00000347471 ABCC6O95255 1503 aa20.58■□□□□ 0.89
SMARCC2-202ENST00000347471 HSP90B1P14625 803 aaKnown RBP20.58■□□□□ 0.89
SMARCC2-202ENST00000347471 CTSWP56202 376 aa20.58■□□□□ 0.89
SMARCC2-202ENST00000347471 NUCB2P80303 420 aa20.58■□□□□ 0.89
SMARCC2-202ENST00000347471 COL9A3Q14050 684 aaPredicted RBP20.58■□□□□ 0.89
SMARCC2-202ENST00000347471 PARP4Q9UKK3 1724 aaKnown RBP20.58■□□□□ 0.88
SMARCC2-202ENST00000347471 CRYBG1Q9Y4K1 1723 aa20.58■□□□□ 0.88
SMARCC2-202ENST00000347471 IDH1O75874 414 aaKnown RBP20.58■□□□□ 0.88
SMARCC2-202ENST00000347471 USP42Q9H9J4 1324 aaKnown RBP20.58■□□□□ 0.88
SMARCC2-202ENST00000347471 SIPA1L3O60292 1781 aaPredicted RBP20.57■□□□□ 0.88
SMARCC2-202ENST00000347471 RNF20Q5VTR2 975 aa20.57■□□□□ 0.88
SMARCC2-202ENST00000347471 RTN4Q9NQC3 1192 aaKnown RBP20.57■□□□□ 0.88
SMARCC2-202ENST00000347471 UBN2Q6ZU65 1347 aa20.57■□□□□ 0.88
SMARCC2-202ENST00000347471 PKD1L3Q7Z443 1732 aa20.57■□□□□ 0.88
SMARCC2-202ENST00000347471 FOSBP53539 338 aa20.57■□□□□ 0.88
SMARCC2-202ENST00000347471 GDPD2Q9HCC8 539 aa20.57■□□□□ 0.88
SMARCC2-202ENST00000347471 THRAP3Q9Y2W1 955 aaKnown RBP20.57■□□□□ 0.88
SMARCC2-202ENST00000347471 PRPF40AO75400 957 aaKnown RBP20.56■□□□□ 0.88
SMARCC2-202ENST00000347471 HAND2P61296 217 aa20.56■□□□□ 0.88
SMARCC2-202ENST00000347471 BAG4O95429 457 aaKnown RBP20.56■□□□□ 0.88
SMARCC2-202ENST00000347471 SCARF1Q14162 830 aa20.56■□□□□ 0.88
SMARCC2-202ENST00000347471 INTS5Q6P9B9 1019 aaKnown RBP20.56■□□□□ 0.88
SMARCC2-202ENST00000347471 BLOC1S2Q6QNY1 142 aa20.56■□□□□ 0.88
SMARCC2-202ENST00000347471 UTP14AQ9BVJ6 771 aaKnown RBP20.56■□□□□ 0.88
SMARCC2-202ENST00000347471 SLC27A2O14975 620 aa20.55■□□□□ 0.88
SMARCC2-202ENST00000347471 MCM2P49736 904 aa20.55■□□□□ 0.88
SMARCC2-202ENST00000347471 VPS53Q5VIR6 699 aa20.55■□□□□ 0.88
SMARCC2-202ENST00000347471 SH3TC1Q8TE82 1336 aa20.55■□□□□ 0.88
SMARCC2-202ENST00000347471 APPP05067 770 aa20.55■□□□□ 0.88
SMARCC2-202ENST00000347471 HAUS7Q99871 368 aa20.55■□□□□ 0.88
SMARCC2-202ENST00000347471 SMC3Q9UQE7 1217 aa20.55■□□□□ 0.88
SMARCC2-202ENST00000347471 TNS2Q63HR2 1409 aa20.55■□□□□ 0.88
SMARCC2-202ENST00000347471 ZAP70P43403 619 aa20.55■□□□□ 0.88
SMARCC2-202ENST00000347471 STK11IPQ8N1F8 1099 aa20.55■□□□□ 0.88
SMARCC2-202ENST00000347471 AKAP2Q9Y2D5 859 aa20.55■□□□□ 0.88
SMARCC2-202ENST00000347471 NHSL1Q5SYE7 1610 aa20.55■□□□□ 0.88
SMARCC2-202ENST00000347471 GNPATO15228 680 aa20.54■□□□□ 0.88
SMARCC2-202ENST00000347471 PDE8AO60658 829 aa20.54■□□□□ 0.88
SMARCC2-202ENST00000347471 CHST3Q7LGC8 479 aa20.54■□□□□ 0.88
SMARCC2-202ENST00000347471 KBTBD3Q8NAB2 608 aa20.54■□□□□ 0.88
SMARCC2-202ENST00000347471 VPS37CA5D8V6 355 aaPredicted RBP20.54■□□□□ 0.88
SMARCC2-202ENST00000347471 LARGE1O95461 756 aa20.54■□□□□ 0.88
SMARCC2-202ENST00000347471 EIF5P55010 431 aaKnown RBP20.54■□□□□ 0.88
SMARCC2-202ENST00000347471 DISP2A7MBM2 1401 aa20.53■□□□□ 0.88
SMARCC2-202ENST00000347471 MCMDC2Q4G0Z9 681 aa20.53■□□□□ 0.88
SMARCC2-202ENST00000347471 SRP68Q9UHB9 627 aaKnown RBP20.53■□□□□ 0.88
SMARCC2-202ENST00000347471 RUFY3Q7L099 469 aa20.53■□□□□ 0.88
SMARCC2-202ENST00000347471 CWC22Q9HCG8 908 aaKnown RBP20.53■□□□□ 0.88
SMARCC2-202ENST00000347471 BRPF3Q9ULD4 1205 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 213.3 ms