RNA–Protein interactions for RNA: ENST00000347048.8

PTPA-202, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-202ENST00000347048 EPHA10Q5JZY3 1008 aa28.78■■■□□ 2.2
PTPA-202ENST00000347048 LRP10Q7Z4F1 713 aa28.78■■■□□ 2.2
PTPA-202ENST00000347048 SASS6Q6UVJ0 657 aa28.77■■■□□ 2.2
PTPA-202ENST00000347048 NFATC2IPQ8NCF5 419 aa28.77■■■□□ 2.2
PTPA-202ENST00000347048 NLRP2Q9NX02 1062 aa28.77■■■□□ 2.2
PTPA-202ENST00000347048 TOB2Q14106 344 aaPredicted RBP28.77■■■□□ 2.2
PTPA-202ENST00000347048 TNNI3KQ59H18 835 aa28.77■■■□□ 2.2
PTPA-202ENST00000347048 KLHDC4Q8TBB5 520 aa28.77■■■□□ 2.2
PTPA-202ENST00000347048 DDX54Q8TDD1 881 aaKnown RBP28.77■■■□□ 2.2
PTPA-202ENST00000347048 ZNF496Q96IT1 587 aaPredicted RBP28.77■■■□□ 2.2
PTPA-202ENST00000347048 PDCL3Q9H2J4 239 aa28.77■■■□□ 2.2
PTPA-202ENST00000347048 FPGT-TNNI3KV9GXZ4 949 aa28.77■■■□□ 2.2
PTPA-202ENST00000347048 AFDNP55196 1824 aaKnown RBP28.76■■■□□ 2.19
PTPA-202ENST00000347048 CCDC192P0DO97 292 aa28.76■■■□□ 2.19
PTPA-202ENST00000347048 GIMAP6Q6P9H5 292 aa28.76■■■□□ 2.19
PTPA-202ENST00000347048 TTC5Q8N0Z6 440 aa28.76■■■□□ 2.19
PTPA-202ENST00000347048 SCAND2PQ9GZW5 306 aaPredicted RBP28.76■■■□□ 2.19
PTPA-202ENST00000347048 ZNF589Q86UQ0 364 aaPredicted RBP28.75■■■□□ 2.19
PTPA-202ENST00000347048 DCAF5Q96JK2 942 aa28.75■■■□□ 2.19
PTPA-202ENST00000347048 MEGF6O75095 1541 aa28.75■■■□□ 2.19
PTPA-202ENST00000347048 ZC3H6P61129 1189 aaKnown RBP28.75■■■□□ 2.19
PTPA-202ENST00000347048 PTPN12Q05209 780 aaKnown RBP28.75■■■□□ 2.19
PTPA-202ENST00000347048 CDC37L1Q7L3B6 337 aa28.75■■■□□ 2.19
PTPA-202ENST00000347048 DBNLQ9UJU6 430 aaKnown RBP28.75■■■□□ 2.19
PTPA-202ENST00000347048 TTC6Q86TZ1 520 aa28.74■■■□□ 2.19
PTPA-202ENST00000347048 PIBF1Q8WXW3 757 aa28.74■■■□□ 2.19
PTPA-202ENST00000347048 FMNL2Q96PY5 1086 aa28.74■■■□□ 2.19
PTPA-202ENST00000347048 C19orf44Q9H6X5 657 aa28.74■■■□□ 2.19
PTPA-202ENST00000347048 U3KPZ7 1027 aaPredicted RBP28.74■■■□□ 2.19
PTPA-202ENST00000347048 COL18A1P39060 1754 aa28.74■■■□□ 2.19
PTPA-202ENST00000347048 ARFGEF2Q9Y6D5 1785 aa28.74■■■□□ 2.19
PTPA-202ENST00000347048 TPM3P06753 285 aa28.73■■■□□ 2.19
PTPA-202ENST00000347048 TICAM2Q86XR7 235 aa28.73■■■□□ 2.19
PTPA-202ENST00000347048 PKD1L3Q7Z443 1732 aa28.73■■■□□ 2.19
PTPA-202ENST00000347048 UQCRHLA0A096LP55 91 aa28.72■■■□□ 2.19
PTPA-202ENST00000347048 UQCRHP07919 91 aa28.72■■■□□ 2.19
PTPA-202ENST00000347048 MAP7D2Q96T17 732 aa28.72■■■□□ 2.19
PTPA-202ENST00000347048 LAMB4A4D0S4 1761 aa28.72■■■□□ 2.19
PTPA-202ENST00000347048 DYNC1I1O14576 645 aa28.71■■■□□ 2.19
PTPA-202ENST00000347048 TFCP2Q12800 502 aa28.71■■■□□ 2.19
PTPA-202ENST00000347048 HAUS7Q99871 368 aa28.71■■■□□ 2.19
PTPA-202ENST00000347048 NUP62CLQ9H1M0 184 aa28.71■■■□□ 2.19
PTPA-202ENST00000347048 MAP3K11Q16584 847 aa28.7■■■□□ 2.19
PTPA-202ENST00000347048 NEK1Q96PY6 1258 aa28.7■■■□□ 2.19
PTPA-202ENST00000347048 TPRNQ4KMQ1 711 aa28.7■■■□□ 2.18
PTPA-202ENST00000347048 USP16Q9Y5T5 823 aa28.7■■■□□ 2.18
PTPA-202ENST00000347048 GTF3C6Q969F1 213 aa28.69■■■□□ 2.18
PTPA-202ENST00000347048 TAF6LQ9Y6J9 622 aa28.69■■■□□ 2.18
PTPA-202ENST00000347048 XIRP1Q702N8 1843 aaKnown RBP28.69■■■□□ 2.18
PTPA-202ENST00000347048 MCMDC2Q4G0Z9 681 aa28.68■■■□□ 2.18
PTPA-202ENST00000347048 UBE3BQ7Z3V4 1068 aa28.68■■■□□ 2.18
PTPA-202ENST00000347048 PLBD2Q8NHP8 589 aa28.68■■■□□ 2.18
PTPA-202ENST00000347048 PARP4Q9UKK3 1724 aaKnown RBP28.68■■■□□ 2.18
PTPA-202ENST00000347048 TCEANC2Q96MN5 208 aa28.68■■■□□ 2.18
PTPA-202ENST00000347048 DDX19AQ9NUU7 478 aaKnown RBP28.68■■■□□ 2.18
PTPA-202ENST00000347048 LTBP4Q8N2S1 1624 aa28.67■■■□□ 2.18
PTPA-202ENST00000347048 ZNF609O15014 1411 aa28.67■■■□□ 2.18
PTPA-202ENST00000347048 CASP7P55210 303 aa28.67■■■□□ 2.18
PTPA-202ENST00000347048 COL9A3Q14050 684 aaPredicted RBP28.67■■■□□ 2.18
PTPA-202ENST00000347048 FERMT3Q86UX7 667 aa28.67■■■□□ 2.18
PTPA-202ENST00000347048 FAM200AQ8TCP9 573 aa28.67■■■□□ 2.18
PTPA-202ENST00000347048 EDC3Q96F86 508 aaKnown RBP28.66■■■□□ 2.18
PTPA-202ENST00000347048 SPATA32Q96LK8 384 aa28.66■■■□□ 2.18
PTPA-202ENST00000347048 SH3TC1Q8TE82 1336 aa28.66■■■□□ 2.18
PTPA-202ENST00000347048 A0A087WZG4 1122 aa28.66■■■□□ 2.18
PTPA-202ENST00000347048 GOLGA6L4A6NEF3 574 aa28.66■■■□□ 2.18
PTPA-202ENST00000347048 HMGB1P09429 215 aaKnown RBP28.66■■■□□ 2.18
PTPA-202ENST00000347048 NOLC1Q14978 699 aaKnown RBP eCLIP28.65■■■□□ 2.18
PTPA-202ENST00000347048 SPTLC3Q9NUV7 552 aa28.65■■■□□ 2.18
PTPA-202ENST00000347048 PALLDQ8WX93 1383 aa28.65■■■□□ 2.18
PTPA-202ENST00000347048 GOLGA6L6A8MZA4 724 aa28.64■■■□□ 2.18
PTPA-202ENST00000347048 CSB-PGBD3P0DP91 1061 aa28.64■■■□□ 2.18
PTPA-202ENST00000347048 GLI3P10071 1580 aa28.64■■■□□ 2.18
PTPA-202ENST00000347048 MTERF4Q7Z6M4 381 aaKnown RBP28.64■■■□□ 2.18
PTPA-202ENST00000347048 DBNDD2Q9BQY9 259 aa28.64■■■□□ 2.18
PTPA-202ENST00000347048 CYP27B1O15528 508 aa28.64■■■□□ 2.17
PTPA-202ENST00000347048 DTNBO60941 627 aa28.64■■■□□ 2.17
PTPA-202ENST00000347048 LEO1Q8WVC0 666 aaPredicted RBP28.64■■■□□ 2.17
PTPA-202ENST00000347048 PRIMPOLQ96LW4 560 aa28.64■■■□□ 2.17
PTPA-202ENST00000347048 LLPHQ9BRT6 129 aaKnown RBP28.64■■■□□ 2.17
PTPA-202ENST00000347048 GPR108Q9NPR9 543 aa28.64■■■□□ 2.17
PTPA-202ENST00000347048 DCCP43146 1447 aa28.63■■■□□ 2.17
PTPA-202ENST00000347048 LIG1P18858 919 aa28.63■■■□□ 2.17
PTPA-202ENST00000347048 RBM43Q6ZSC3 357 aaKnown RBP28.63■■■□□ 2.17
PTPA-202ENST00000347048 KBTBD3Q8NAB2 608 aa28.63■■■□□ 2.17
PTPA-202ENST00000347048 DNAJC2Q99543 621 aaKnown RBP28.63■■■□□ 2.17
PTPA-202ENST00000347048 ZSCAN16Q9H4T2 348 aaPredicted RBP28.63■■■□□ 2.17
PTPA-202ENST00000347048 TNMDQ9H2S6 317 aa28.62■■■□□ 2.17
PTPA-202ENST00000347048 CABP4P57796 275 aa28.62■■■□□ 2.17
PTPA-202ENST00000347048 TYRO3Q06418 890 aa28.62■■■□□ 2.17
PTPA-202ENST00000347048 STK3Q13188 491 aa28.62■■■□□ 2.17
PTPA-202ENST00000347048 Q6ZUG5 572 aa28.62■■■□□ 2.17
PTPA-202ENST00000347048 TTC12Q9H892 705 aaPredicted RBP28.62■■■□□ 2.17
PTPA-202ENST00000347048 HELLSQ9NRZ9 838 aa28.62■■■□□ 2.17
PTPA-202ENST00000347048 HMGN5P82970 282 aaKnown RBP28.61■■■□□ 2.17
PTPA-202ENST00000347048 CLSTN2Q9H4D0 955 aa28.61■■■□□ 2.17
PTPA-202ENST00000347048 MRVI1Q9Y6F6 885 aa28.61■■■□□ 2.17
PTPA-202ENST00000347048 CYP21A2P08686 494 aa28.61■■■□□ 2.17
PTPA-202ENST00000347048 FAM173BQ6P4H8 233 aa28.61■■■□□ 2.17
PTPA-202ENST00000347048 ZNF830Q96NB3 372 aaPredicted RBP28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms