RNA–Protein interactions for RNA: ENST00000345097.8

FOXN3-202, Transcript of forkhead box N3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene FOXN3, Length 7,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-202ENST00000345097 SBNO1A3KN83 1393 aa10.49□□□□□ -0.73
FOXN3-202ENST00000345097 HMGB1P09429 215 aaKnown RBP10.49□□□□□ -0.73
FOXN3-202ENST00000345097 CCDC96Q2M329 555 aa10.49□□□□□ -0.73
FOXN3-202ENST00000345097 CLTCQ00610 1675 aaKnown RBP10.48□□□□□ -0.73
FOXN3-202ENST00000345097 FILIP1Q7Z7B0 1213 aa10.48□□□□□ -0.73
FOXN3-202ENST00000345097 PLEKHM2Q8IWE5 1019 aa10.48□□□□□ -0.73
FOXN3-202ENST00000345097 RBM8AQ9Y5S9 174 aaKnown RBP10.48□□□□□ -0.73
FOXN3-202ENST00000345097 ZBTB7BO15156 539 aaPredicted RBP10.48□□□□□ -0.73
FOXN3-202ENST00000345097 TTF1Q15361 905 aaPredicted RBP10.48□□□□□ -0.73
FOXN3-202ENST00000345097 CCDC183Q5T5S1 534 aa10.48□□□□□ -0.73
FOXN3-202ENST00000345097 EFCAB6Q5THR3 1501 aa10.48□□□□□ -0.73
FOXN3-202ENST00000345097 MAP3K4Q9Y6R4 1608 aa10.48□□□□□ -0.73
FOXN3-202ENST00000345097 Q6ZUG5 572 aa10.48□□□□□ -0.73
FOXN3-202ENST00000345097 IQCA1Q86XH1 822 aa10.48□□□□□ -0.73
FOXN3-202ENST00000345097 SMTNL1A8MU46 457 aa10.47□□□□□ -0.73
FOXN3-202ENST00000345097 ST5P78524 1137 aa10.47□□□□□ -0.73
FOXN3-202ENST00000345097 MFSD6Q6ZSS7 791 aa10.47□□□□□ -0.73
FOXN3-202ENST00000345097 CNKSR2Q8WXI2 1034 aa10.47□□□□□ -0.73
FOXN3-202ENST00000345097 SLC26A6Q9BXS9 759 aa10.47□□□□□ -0.73
FOXN3-202ENST00000345097 SPATA31E1Q6ZUB1 1445 aa10.47□□□□□ -0.73
FOXN3-202ENST00000345097 USP16Q9Y5T5 823 aa10.47□□□□□ -0.73
FOXN3-202ENST00000345097 PRDM15P57071 1507 aaPredicted RBP10.47□□□□□ -0.73
FOXN3-202ENST00000345097 CATIPQ7Z7H3 387 aa10.47□□□□□ -0.73
FOXN3-202ENST00000345097 PAG1Q9NWQ8 432 aa10.47□□□□□ -0.73
FOXN3-202ENST00000345097 PCDH11XQ9BZA7 1347 aa10.47□□□□□ -0.73
FOXN3-202ENST00000345097 PCDH11YQ9BZA8 1340 aa10.47□□□□□ -0.73
FOXN3-202ENST00000345097 NLRP5P59047 1200 aa10.47□□□□□ -0.73
FOXN3-202ENST00000345097 PUS7Q96PZ0 661 aaKnown RBP10.47□□□□□ -0.73
FOXN3-202ENST00000345097 PANK2Q9BZ23 570 aa10.47□□□□□ -0.73
FOXN3-202ENST00000345097 CNPY2Q9Y2B0 182 aa10.47□□□□□ -0.73
FOXN3-202ENST00000345097 BIN1O00499 593 aa10.47□□□□□ -0.73
FOXN3-202ENST00000345097 BAG4O95429 457 aaKnown RBP10.47□□□□□ -0.73
FOXN3-202ENST00000345097 METAP2P50579 478 aaKnown RBP eCLIP10.47□□□□□ -0.73
FOXN3-202ENST00000345097 ZRSR2Q15696 482 aaKnown RBP10.47□□□□□ -0.73
FOXN3-202ENST00000345097 TMX1Q9H3N1 280 aa10.47□□□□□ -0.73
FOXN3-202ENST00000345097 UBXN4Q92575 508 aa10.47□□□□□ -0.73
FOXN3-202ENST00000345097 CEP131Q9UPN4 1083 aa10.47□□□□□ -0.73
FOXN3-202ENST00000345097 TBX22Q9Y458 520 aa10.47□□□□□ -0.73
FOXN3-202ENST00000345097 KIF18AQ8NI77 898 aa10.46□□□□□ -0.73
FOXN3-202ENST00000345097 ZNF594Q96JF6 807 aaPredicted RBP10.46□□□□□ -0.73
FOXN3-202ENST00000345097 GBP3Q9H0R5 595 aa10.46□□□□□ -0.73
FOXN3-202ENST00000345097 USP19O94966 1318 aa10.46□□□□□ -0.73
FOXN3-202ENST00000345097 MATR3P43243 847 aaKnown RBP eCLIP10.46□□□□□ -0.738e-7■■■□□ 17.4
FOXN3-202ENST00000345097 MCMDC2Q4G0Z9 681 aa10.46□□□□□ -0.73
FOXN3-202ENST00000345097 ZNF790Q6PG37 636 aa10.46□□□□□ -0.73
FOXN3-202ENST00000345097 ANKRD18AQ8IVF6 992 aa10.46□□□□□ -0.73
FOXN3-202ENST00000345097 SLC4A4Q9Y6R1 1079 aa10.46□□□□□ -0.73
FOXN3-202ENST00000345097 DTNBO60941 627 aa10.46□□□□□ -0.73
FOXN3-202ENST00000345097 CYP7A1P22680 504 aa10.46□□□□□ -0.73
FOXN3-202ENST00000345097 ATP2B3Q16720 1220 aa10.46□□□□□ -0.73
FOXN3-202ENST00000345097 MAGEB6Q8N7X4 407 aa10.46□□□□□ -0.73
FOXN3-202ENST00000345097 UTP14AQ9BVJ6 771 aaKnown RBP10.46□□□□□ -0.73
FOXN3-202ENST00000345097 NDUFB9Q9Y6M9 179 aa10.46□□□□□ -0.73
FOXN3-202ENST00000345097 METP08581 1390 aa10.46□□□□□ -0.73
FOXN3-202ENST00000345097 TSPY2A6NKD2 308 aa10.46□□□□□ -0.74
FOXN3-202ENST00000345097 TRMT1LQ7Z2T5 733 aaKnown RBP10.46□□□□□ -0.74
FOXN3-202ENST00000345097 TMEM2Q9UHN6 1383 aa10.46□□□□□ -0.74
FOXN3-202ENST00000345097 MIGA1Q8NAN2 632 aa10.46□□□□□ -0.74
FOXN3-202ENST00000345097 CTCFLQ8NI51 663 aaPredicted RBP10.46□□□□□ -0.74
FOXN3-202ENST00000345097 FAM89AQ96GI7 184 aa10.46□□□□□ -0.74
FOXN3-202ENST00000345097 NCOA7Q8NI08 942 aa10.45□□□□□ -0.74
FOXN3-202ENST00000345097 DCAF5Q96JK2 942 aa10.45□□□□□ -0.74
FOXN3-202ENST00000345097 DCTPP1Q9H773 170 aa10.45□□□□□ -0.74
FOXN3-202ENST00000345097 ERVK-7P63135 1459 aa10.45□□□□□ -0.74
FOXN3-202ENST00000345097 MCM3P25205 808 aa10.45□□□□□ -0.74
FOXN3-202ENST00000345097 CCDC129Q6ZRS4 1044 aa10.45□□□□□ -0.74
FOXN3-202ENST00000345097 IRS4O14654 1257 aaPredicted RBP10.45□□□□□ -0.74
FOXN3-202ENST00000345097 FBXO3Q9UK99 471 aa10.45□□□□□ -0.74
FOXN3-202ENST00000345097 TOM1O60784 492 aa10.45□□□□□ -0.74
FOXN3-202ENST00000345097 CPA1P15085 419 aa10.45□□□□□ -0.74
FOXN3-202ENST00000345097 IBSPP21815 317 aaPredicted RBP10.45□□□□□ -0.74
FOXN3-202ENST00000345097 PICALMQ13492 652 aa10.45□□□□□ -0.74
FOXN3-202ENST00000345097 CFAP100Q494V2 611 aa10.45□□□□□ -0.74
FOXN3-202ENST00000345097 FSIP1Q8NA03 581 aa10.45□□□□□ -0.74
FOXN3-202ENST00000345097 ZNF287Q9HBT7 754 aa10.45□□□□□ -0.74
FOXN3-202ENST00000345097 CALCOCO1Q9P1Z2 691 aa10.45□□□□□ -0.74
FOXN3-202ENST00000345097 GLI2P10070 1586 aa10.45□□□□□ -0.74
FOXN3-202ENST00000345097 CCDC181Q5TID7 509 aa10.45□□□□□ -0.74
FOXN3-202ENST00000345097 SEPT11Q9NVA2 429 aaKnown RBP10.45□□□□□ -0.74
FOXN3-202ENST00000345097 TMOD2Q9NZR1 351 aa10.45□□□□□ -0.74
FOXN3-202ENST00000345097 SLC9C2Q5TAH2 1124 aa10.44□□□□□ -0.74
FOXN3-202ENST00000345097 KCNQ3O43525 872 aa10.44□□□□□ -0.74
FOXN3-202ENST00000345097 A1BGP04217 495 aa10.44□□□□□ -0.74
FOXN3-202ENST00000345097 RXRAP19793 462 aa10.44□□□□□ -0.74
FOXN3-202ENST00000345097 PTPN14Q15678 1187 aa10.44□□□□□ -0.74
FOXN3-202ENST00000345097 MAP9Q49MG5 647 aa10.44□□□□□ -0.74
FOXN3-202ENST00000345097 CCDC24Q8N4L8 307 aa10.44□□□□□ -0.74
FOXN3-202ENST00000345097 BRF1Q92994 677 aa10.44□□□□□ -0.74
FOXN3-202ENST00000345097 SBNO2Q9Y2G9 1366 aa10.44□□□□□ -0.74
FOXN3-202ENST00000345097 PNMA6EA0A0J9YXQ4 647 aa10.44□□□□□ -0.74
FOXN3-202ENST00000345097 KLF18A0A0U1RQI7 1052 aa10.44□□□□□ -0.74
FOXN3-202ENST00000345097 CHMP4BP1P59074 171 aa10.44□□□□□ -0.74
FOXN3-202ENST00000345097 TMCO3Q6UWJ1 677 aa10.44□□□□□ -0.74
FOXN3-202ENST00000345097 ALDH1L1O75891 902 aa10.44□□□□□ -0.74
FOXN3-202ENST00000345097 GIMAP6Q6P9H5 292 aa10.44□□□□□ -0.74
FOXN3-202ENST00000345097 ZGPATQ8N5A5 531 aaKnown RBP10.44□□□□□ -0.74
FOXN3-202ENST00000345097 INCENPQ9NQS7 918 aa10.44□□□□□ -0.74
FOXN3-202ENST00000345097 DYNC1I1O14576 645 aa10.43□□□□□ -0.74
FOXN3-202ENST00000345097 RIMBP2O15034 1052 aa10.43□□□□□ -0.74
FOXN3-202ENST00000345097 NEMFO60524 1076 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms