RNA–Protein interactions for RNA: ENST00000344935.8

CPSF4L-201, Transcript of cleavage and polyadenylation specific factor 4 like, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CPSF4L, Length 647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4L-201ENST00000344935 SCN9AQ15858 1988 aa10.76□□□□□ -0.69
CPSF4L-201ENST00000344935 SLC34A2O95436 690 aa10.76□□□□□ -0.69
CPSF4L-201ENST00000344935 GRAPQ13588 217 aa10.76□□□□□ -0.69
CPSF4L-201ENST00000344935 CNGB1Q14028 1251 aaPredicted RBP10.76□□□□□ -0.69
CPSF4L-201ENST00000344935 CIAPIN1Q6FI81 312 aa10.76□□□□□ -0.69
CPSF4L-201ENST00000344935 DPP8Q6V1X1 898 aaPredicted RBP10.76□□□□□ -0.69
CPSF4L-201ENST00000344935 GRAPLQ8TC17 118 aaPredicted RBP10.76□□□□□ -0.69
CPSF4L-201ENST00000344935 DPF2Q92785 391 aa10.76□□□□□ -0.69
CPSF4L-201ENST00000344935 GPR101Q96P66 508 aaPredicted RBP10.76□□□□□ -0.69
CPSF4L-201ENST00000344935 THUMPD2Q9BTF0 503 aaKnown RBP10.76□□□□□ -0.69
CPSF4L-201ENST00000344935 ZNF646O15015 1829 aaPredicted RBP10.76□□□□□ -0.69
CPSF4L-201ENST00000344935 PDE4DIPQ5VU43 2346 aa10.75□□□□□ -0.69
CPSF4L-201ENST00000344935 LAMB1P07942 1786 aa10.75□□□□□ -0.69
CPSF4L-201ENST00000344935 TRAF5O00463 557 aa10.75□□□□□ -0.69
CPSF4L-201ENST00000344935 GMPSP49915 693 aaPredicted RBP10.75□□□□□ -0.69
CPSF4L-201ENST00000344935 TCIRG1Q13488 830 aa10.75□□□□□ -0.69
CPSF4L-201ENST00000344935 PROSER3Q2NL68 480 aa10.75□□□□□ -0.69
CPSF4L-201ENST00000344935 SLC51AQ86UW1 340 aa10.75□□□□□ -0.69
CPSF4L-201ENST00000344935 MPNDQ8N594 471 aa10.75□□□□□ -0.69
CPSF4L-201ENST00000344935 NGEFQ8N5V2 710 aa10.75□□□□□ -0.69
CPSF4L-201ENST00000344935 AKAP11Q9UKA4 1901 aa10.75□□□□□ -0.69
CPSF4L-201ENST00000344935 MYH3P11055 1940 aa10.74□□□□□ -0.69
CPSF4L-201ENST00000344935 POLR2AP24928 1970 aaKnown RBP10.74□□□□□ -0.69
CPSF4L-201ENST00000344935 CASP8AP2Q9UKL3 1982 aa10.74□□□□□ -0.69
CPSF4L-201ENST00000344935 COL4A1P02462 1669 aa10.74□□□□□ -0.69
CPSF4L-201ENST00000344935 RPS12P25398 132 aaKnown RBP10.74□□□□□ -0.69
CPSF4L-201ENST00000344935 NOGQ13253 232 aa10.74□□□□□ -0.69
CPSF4L-201ENST00000344935 CYP4F22Q6NT55 531 aa10.74□□□□□ -0.69
CPSF4L-201ENST00000344935 DDX46Q7L014 1031 aaKnown RBP10.74□□□□□ -0.69
CPSF4L-201ENST00000344935 CDC37L1Q7L3B6 337 aa10.74□□□□□ -0.69
CPSF4L-201ENST00000344935 PAPPA2Q9BXP8 1791 aa10.73□□□□□ -0.69
CPSF4L-201ENST00000344935 YDJCA8MPS7 323 aa10.73□□□□□ -0.69
CPSF4L-201ENST00000344935 CHL1O00533 1208 aa10.73□□□□□ -0.69
CPSF4L-201ENST00000344935 CELF2O95319 508 aaKnown RBP10.73□□□□□ -0.69
CPSF4L-201ENST00000344935 TMPOP42166 694 aaKnown RBP10.73□□□□□ -0.69
CPSF4L-201ENST00000344935 TRIM28Q13263 835 aaKnown RBP10.73□□□□□ -0.69
CPSF4L-201ENST00000344935 RALBP1Q15311 655 aa10.73□□□□□ -0.69
CPSF4L-201ENST00000344935 SF3B3Q15393 1217 aaKnown RBP10.73□□□□□ -0.69
CPSF4L-201ENST00000344935 SAGE1Q9NXZ1 904 aa10.73□□□□□ -0.69
CPSF4L-201ENST00000344935 HIRAP54198 1017 aaPredicted RBP10.72□□□□□ -0.69
CPSF4L-201ENST00000344935 RIPK4P57078 832 aa10.72□□□□□ -0.69
CPSF4L-201ENST00000344935 FMR1Q06787 632 aaKnown RBP eCLIP10.72□□□□□ -0.69
CPSF4L-201ENST00000344935 COPS6Q7L5N1 327 aa10.72□□□□□ -0.69
CPSF4L-201ENST00000344935 PLBD2Q8NHP8 589 aa10.72□□□□□ -0.69
CPSF4L-201ENST00000344935 XAGE3Q8WTP9 111 aa10.72□□□□□ -0.69
CPSF4L-201ENST00000344935 ISCA1Q9BUE6 129 aa10.72□□□□□ -0.69
CPSF4L-201ENST00000344935 TRMT112Q9UI30 125 aaKnown RBP10.72□□□□□ -0.69
CPSF4L-201ENST00000344935 MICALL2Q8IY33 904 aa10.71□□□□□ -0.69
CPSF4L-201ENST00000344935 TRPM4Q8TD43 1214 aa10.71□□□□□ -0.69
CPSF4L-201ENST00000344935 NECTIN2Q92692 538 aa10.71□□□□□ -0.69
CPSF4L-201ENST00000344935 GLIS2Q9BZE0 524 aaPredicted RBP10.71□□□□□ -0.69
CPSF4L-201ENST00000344935 PODXL2Q9NZ53 605 aa10.71□□□□□ -0.69
CPSF4L-201ENST00000344935 DBF4Q9UBU7 674 aaPredicted RBP10.71□□□□□ -0.69
CPSF4L-201ENST00000344935 H7C1D1 291 aa10.7□□□□□ -0.7
CPSF4L-201ENST00000344935 HCLS1P14317 486 aaPredicted RBP10.7□□□□□ -0.7
CPSF4L-201ENST00000344935 HSP90B1P14625 803 aaKnown RBP10.7□□□□□ -0.7
CPSF4L-201ENST00000344935 EIF2S2P20042 333 aaKnown RBP10.7□□□□□ -0.7
CPSF4L-201ENST00000344935 FAM161AQ3B820 660 aa10.7□□□□□ -0.7
CPSF4L-201ENST00000344935 BCL2L13Q9BXK5 485 aa10.7□□□□□ -0.7
CPSF4L-201ENST00000344935 CNOT7Q9UIV1 285 aaKnown RBP10.7□□□□□ -0.7
CPSF4L-201ENST00000344935 RTL9Q8NET4 1388 aa10.69□□□□□ -0.7
CPSF4L-201ENST00000344935 MYBBP1AQ9BQG0 1328 aaKnown RBP10.69□□□□□ -0.7
CPSF4L-201ENST00000344935 FAM155AB1AL88 458 aaPredicted RBP10.69□□□□□ -0.7
CPSF4L-201ENST00000344935 TCERG1O14776 1098 aaKnown RBP10.69□□□□□ -0.7
CPSF4L-201ENST00000344935 AOC2O75106 756 aa10.69□□□□□ -0.7
CPSF4L-201ENST00000344935 RAD17O75943 681 aa10.69□□□□□ -0.7
CPSF4L-201ENST00000344935 ANXA1P04083 346 aa10.69□□□□□ -0.7
CPSF4L-201ENST00000344935 MLLT1Q03111 559 aaPredicted RBP10.69□□□□□ -0.7
CPSF4L-201ENST00000344935 WASHC4Q2M389 1173 aa10.69□□□□□ -0.7
CPSF4L-201ENST00000344935 PAXIP1Q6ZW49 1069 aaPredicted RBP10.69□□□□□ -0.7
CPSF4L-201ENST00000344935 EYA3Q99504 573 aa10.69□□□□□ -0.7
CPSF4L-201ENST00000344935 HYPKQ9NX55 129 aa10.69□□□□□ -0.7
CPSF4L-201ENST00000344935 CHPF2Q9P2E5 772 aa10.69□□□□□ -0.7
CPSF4L-201ENST00000344935 CACNA1FO60840 1977 aa10.68□□□□□ -0.7
CPSF4L-201ENST00000344935 PITPNM2Q9BZ72 1349 aa10.68□□□□□ -0.7
CPSF4L-201ENST00000344935 PSMD14O00487 310 aa10.68□□□□□ -0.7
CPSF4L-201ENST00000344935 HDGFL1Q5TGJ6 251 aa10.68□□□□□ -0.7
CPSF4L-201ENST00000344935 ANKRD13DQ6ZTN6 518 aa10.68□□□□□ -0.7
CPSF4L-201ENST00000344935 REM2Q8IYK8 340 aaPredicted RBP10.68□□□□□ -0.7
CPSF4L-201ENST00000344935 CCDC102AQ96A19 550 aa10.68□□□□□ -0.7
CPSF4L-201ENST00000344935 CFAP44Q96MT7 982 aa10.68□□□□□ -0.7
CPSF4L-201ENST00000344935 TRIM35Q9UPQ4 493 aa10.68□□□□□ -0.7
CPSF4L-201ENST00000344935 ECE2O60344 883 aa10.67□□□□□ -0.7
CPSF4L-201ENST00000344935 VIL1P09327 827 aaKnown RBP10.67□□□□□ -0.7
CPSF4L-201ENST00000344935 HUNKP57058 714 aa10.67□□□□□ -0.7
CPSF4L-201ENST00000344935 ZNF280AP59817 542 aaPredicted RBP10.67□□□□□ -0.7
CPSF4L-201ENST00000344935 FKBP1BP68106 108 aa10.67□□□□□ -0.7
CPSF4L-201ENST00000344935 RGMBQ6NW40 437 aa10.67□□□□□ -0.7
CPSF4L-201ENST00000344935 KRT26Q7Z3Y9 468 aa10.67□□□□□ -0.7
CPSF4L-201ENST00000344935 CELF1Q92879 486 aaKnown RBP10.67□□□□□ -0.7
CPSF4L-201ENST00000344935 RUNDC1Q96C34 613 aa10.67□□□□□ -0.7
CPSF4L-201ENST00000344935 MCOLN1Q9GZU1 580 aa10.67□□□□□ -0.7
CPSF4L-201ENST00000344935 GBA2Q9HCG7 927 aaPredicted RBP10.67□□□□□ -0.7
CPSF4L-201ENST00000344935 POLLQ9UGP5 575 aa10.67□□□□□ -0.7
CPSF4L-201ENST00000344935 ECM29Q5VYK3 1845 aa10.67□□□□□ -0.7
CPSF4L-201ENST00000344935 SPEF2Q9C093 1822 aa10.67□□□□□ -0.7
CPSF4L-201ENST00000344935 HTTP42858 3142 aa10.67□□□□□ -0.7
CPSF4L-201ENST00000344935 SLC10A3P09131 477 aa10.66□□□□□ -0.7
CPSF4L-201ENST00000344935 AIMP1Q12904 312 aaKnown RBP10.66□□□□□ -0.7
CPSF4L-201ENST00000344935 ZBTB38Q8NAP3 1195 aaPredicted RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms