RNA–Protein interactions for RNA: ENST00000344586.8

NKX2-3-201, Transcript of NK2 homeobox 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NKX2-3, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-201ENST00000344586 EDC3Q96F86 508 aaKnown RBP27.44■■□□□ 1.98
NKX2-3-201ENST00000344586 GCKRQ14397 625 aa27.44■■□□□ 1.98
NKX2-3-201ENST00000344586 USPL1Q5W0Q7 1092 aa27.44■■□□□ 1.98
NKX2-3-201ENST00000344586 PYCARDQ9ULZ3 195 aa27.44■■□□□ 1.98
NKX2-3-201ENST00000344586 TPM3P06753 285 aa27.43■■□□□ 1.98
NKX2-3-201ENST00000344586 CAMK4Q16566 473 aa27.43■■□□□ 1.98
NKX2-3-201ENST00000344586 SCAND2PQ9GZW5 306 aaPredicted RBP27.43■■□□□ 1.98
NKX2-3-201ENST00000344586 STK3Q13188 491 aa27.42■■□□□ 1.98
NKX2-3-201ENST00000344586 JARID2Q92833 1246 aaPredicted RBP27.42■■□□□ 1.98
NKX2-3-201ENST00000344586 SPC24Q8NBT2 197 aa27.42■■□□□ 1.98
NKX2-3-201ENST00000344586 ORAI2Q96SN7 254 aa27.42■■□□□ 1.98
NKX2-3-201ENST00000344586 TRPM3Q9HCF6 1732 aaPredicted RBP27.41■■□□□ 1.98
NKX2-3-201ENST00000344586 NEXNQ0ZGT2 675 aa27.41■■□□□ 1.98
NKX2-3-201ENST00000344586 SLC39A6Q13433 755 aa27.41■■□□□ 1.98
NKX2-3-201ENST00000344586 ZNF790Q6PG37 636 aa27.41■■□□□ 1.98
NKX2-3-201ENST00000344586 LEO1Q8WVC0 666 aaPredicted RBP27.41■■□□□ 1.98
NKX2-3-201ENST00000344586 SPATA32Q96LK8 384 aa27.41■■□□□ 1.98
NKX2-3-201ENST00000344586 DACT1Q9NYF0 836 aa27.41■■□□□ 1.98
NKX2-3-201ENST00000344586 KDM6AO15550 1401 aaPredicted RBP27.41■■□□□ 1.98
NKX2-3-201ENST00000344586 NPHP3Q7Z494 1330 aa27.41■■□□□ 1.98
NKX2-3-201ENST00000344586 MYL6BP14649 208 aa27.4■■□□□ 1.98
NKX2-3-201ENST00000344586 XAGE3Q8WTP9 111 aa27.4■■□□□ 1.98
NKX2-3-201ENST00000344586 MYD88Q99836 296 aa27.4■■□□□ 1.98
NKX2-3-201ENST00000344586 DBNLQ9UJU6 430 aaKnown RBP27.4■■□□□ 1.98
NKX2-3-201ENST00000344586 ATP5JP18859 108 aa27.4■■□□□ 1.98
NKX2-3-201ENST00000344586 ANKLE2Q86XL3 938 aa27.4■■□□□ 1.98
NKX2-3-201ENST00000344586 METTL22Q9BUU2 404 aaPredicted RBP27.4■■□□□ 1.98
NKX2-3-201ENST00000344586 TNMDQ9H2S6 317 aa27.4■■□□□ 1.98
NKX2-3-201ENST00000344586 TFIP11Q9UBB9 837 aaKnown RBP27.4■■□□□ 1.98
NKX2-3-201ENST00000344586 RBM43Q6ZSC3 357 aaKnown RBP27.39■■□□□ 1.98
NKX2-3-201ENST00000344586 LUZP1Q86V48 1076 aa27.39■■□□□ 1.98
NKX2-3-201ENST00000344586 GTF3C6Q969F1 213 aa27.39■■□□□ 1.98
NKX2-3-201ENST00000344586 COPRSQ9NQ92 184 aa27.39■■□□□ 1.98
NKX2-3-201ENST00000344586 RGPD5Q99666 1765 aa27.39■■□□□ 1.97
NKX2-3-201ENST00000344586 SCN11AQ9UI33 1791 aa27.39■■□□□ 1.97
NKX2-3-201ENST00000344586 RFX5P48382 616 aaPredicted RBP27.39■■□□□ 1.97
NKX2-3-201ENST00000344586 KRT32Q14532 448 aa27.39■■□□□ 1.97
NKX2-3-201ENST00000344586 CKAP2LQ8IYA6 745 aa27.39■■□□□ 1.97
NKX2-3-201ENST00000344586 RFX7Q2KHR2 1363 aa27.38■■□□□ 1.97
NKX2-3-201ENST00000344586 GOLGA6L6A8MZA4 724 aa27.38■■□□□ 1.97
NKX2-3-201ENST00000344586 JAK2O60674 1132 aa27.38■■□□□ 1.97
NKX2-3-201ENST00000344586 TSC1Q92574 1164 aa27.38■■□□□ 1.97
NKX2-3-201ENST00000344586 CLSTN2Q9H4D0 955 aa27.38■■□□□ 1.97
NKX2-3-201ENST00000344586 DDX19AQ9NUU7 478 aaKnown RBP27.38■■□□□ 1.97
NKX2-3-201ENST00000344586 ZNF609O15014 1411 aa27.38■■□□□ 1.97
NKX2-3-201ENST00000344586 TNNI3KQ59H18 835 aa27.37■■□□□ 1.97
NKX2-3-201ENST00000344586 COPS6Q7L5N1 327 aa27.37■■□□□ 1.97
NKX2-3-201ENST00000344586 ZNF710Q8N1W2 664 aa27.37■■□□□ 1.97
NKX2-3-201ENST00000344586 SLC52A2Q9HAB3 445 aa27.37■■□□□ 1.97
NKX2-3-201ENST00000344586 FPGT-TNNI3KV9GXZ4 949 aa27.37■■□□□ 1.97
NKX2-3-201ENST00000344586 GOLGA6L4A6NEF3 574 aa27.36■■□□□ 1.97
NKX2-3-201ENST00000344586 ANO6Q4KMQ2 910 aa27.36■■□□□ 1.97
NKX2-3-201ENST00000344586 LMOD2Q6P5Q4 547 aa27.36■■□□□ 1.97
NKX2-3-201ENST00000344586 CBX8Q9HC52 389 aa27.36■■□□□ 1.97
NKX2-3-201ENST00000344586 ERBB3P21860 1342 aa27.36■■□□□ 1.97
NKX2-3-201ENST00000344586 PTPN12Q05209 780 aaKnown RBP27.36■■□□□ 1.97
NKX2-3-201ENST00000344586 TFCP2Q12800 502 aa27.36■■□□□ 1.97
NKX2-3-201ENST00000344586 RESTQ13127 1097 aa27.36■■□□□ 1.97
NKX2-3-201ENST00000344586 LRP10Q7Z4F1 713 aa27.36■■□□□ 1.97
NKX2-3-201ENST00000344586 PGBD1Q96JS3 809 aa27.36■■□□□ 1.97
NKX2-3-201ENST00000344586 NEK1Q96PY6 1258 aa27.35■■□□□ 1.97
NKX2-3-201ENST00000344586 NDUFB9Q9Y6M9 179 aa27.35■■□□□ 1.97
NKX2-3-201ENST00000344586 ZNF142P52746 1687 aaPredicted RBP27.35■■□□□ 1.97
NKX2-3-201ENST00000344586 CHGBP05060 677 aa27.34■■□□□ 1.97
NKX2-3-201ENST00000344586 PTGS1P23219 599 aa27.34■■□□□ 1.97
NKX2-3-201ENST00000344586 CCDC129Q6ZRS4 1044 aa27.34■■□□□ 1.97
NKX2-3-201ENST00000344586 BRF1Q92994 677 aa27.34■■□□□ 1.97
NKX2-3-201ENST00000344586 NR1I2O75469 434 aa27.33■■□□□ 1.97
NKX2-3-201ENST00000344586 Q6ZUG5 572 aa27.33■■□□□ 1.97
NKX2-3-201ENST00000344586 ARID3AQ99856 593 aa27.33■■□□□ 1.97
NKX2-3-201ENST00000344586 U3KPZ7 1027 aaPredicted RBP27.33■■□□□ 1.97
NKX2-3-201ENST00000344586 RABL6Q3YEC7 729 aaPredicted RBP27.32■■□□□ 1.96
NKX2-3-201ENST00000344586 AFDNP55196 1824 aaKnown RBP27.32■■□□□ 1.96
NKX2-3-201ENST00000344586 ZNF496Q96IT1 587 aaPredicted RBP27.32■■□□□ 1.96
NKX2-3-201ENST00000344586 SEC62Q99442 399 aaKnown RBP27.32■■□□□ 1.96
NKX2-3-201ENST00000344586 KIF3AQ9Y496 699 aa27.32■■□□□ 1.96
NKX2-3-201ENST00000344586 CYP21A2P08686 494 aa27.31■■□□□ 1.96
NKX2-3-201ENST00000344586 ANKRD13DQ6ZTN6 518 aa27.31■■□□□ 1.96
NKX2-3-201ENST00000344586 NFATC2IPQ8NCF5 419 aa27.31■■□□□ 1.96
NKX2-3-201ENST00000344586 TDRD7Q8NHU6 1098 aaKnown RBP27.31■■□□□ 1.96
NKX2-3-201ENST00000344586 BICD2Q8TD16 824 aa27.31■■□□□ 1.96
NKX2-3-201ENST00000344586 DNAJC2Q99543 621 aaKnown RBP27.31■■□□□ 1.96
NKX2-3-201ENST00000344586 DBNDD2Q9BQY9 259 aa27.31■■□□□ 1.96
NKX2-3-201ENST00000344586 PHKG2P15735 406 aa27.3■■□□□ 1.96
NKX2-3-201ENST00000344586 PKNOX2Q96KN3 472 aa27.3■■□□□ 1.96
NKX2-3-201ENST00000344586 HAUS7Q99871 368 aa27.3■■□□□ 1.96
NKX2-3-201ENST00000344586 ARFGEF2Q9Y6D5 1785 aa27.3■■□□□ 1.96
NKX2-3-201ENST00000344586 HSP90B1P14625 803 aaKnown RBP27.29■■□□□ 1.96
NKX2-3-201ENST00000344586 UBE3BQ7Z3V4 1068 aa27.29■■□□□ 1.96
NKX2-3-201ENST00000344586 PLA2G4DQ86XP0 818 aa27.29■■□□□ 1.96
NKX2-3-201ENST00000344586 RAPGEF4Q8WZA2 1011 aa27.29■■□□□ 1.96
NKX2-3-201ENST00000344586 CCDC94Q9BW85 323 aaPredicted RBP27.29■■□□□ 1.96
NKX2-3-201ENST00000344586 PIP4K2AP48426 406 aaPredicted RBP27.29■■□□□ 1.96
NKX2-3-201ENST00000344586 MCMDC2Q4G0Z9 681 aa27.29■■□□□ 1.96
NKX2-3-201ENST00000344586 MEGF6O75095 1541 aa27.28■■□□□ 1.96
NKX2-3-201ENST00000344586 DDX11Q96FC9 970 aa27.28■■□□□ 1.96
NKX2-3-201ENST00000344586 FAM177BA6PVY3 158 aa27.28■■□□□ 1.96
NKX2-3-201ENST00000344586 ZNF75DP51815 510 aa27.28■■□□□ 1.96
NKX2-3-201ENST00000344586 SCRN1Q12765 414 aa27.28■■□□□ 1.96
NKX2-3-201ENST00000344586 STOX1Q6ZVD7 989 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms