RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 SLU7O95391 586 aaKnown RBP12.63□□□□□ -0.39
RPL28-201ENST00000344063 CCAR1Q8IX12 1150 aaKnown RBP12.63□□□□□ -0.39
RPL28-201ENST00000344063 ZNF397Q8NF99 534 aaPredicted RBP12.63□□□□□ -0.39
RPL28-201ENST00000344063 CPLX3Q8WVH0 158 aa12.63□□□□□ -0.39
RPL28-201ENST00000344063 CENPHQ9H3R5 247 aa12.63□□□□□ -0.39
RPL28-201ENST00000344063 GOLIM4O00461 696 aa12.63□□□□□ -0.39
RPL28-201ENST00000344063 HOXB7P09629 217 aa12.63□□□□□ -0.39
RPL28-201ENST00000344063 BRF1Q92994 677 aa12.63□□□□□ -0.39
RPL28-201ENST00000344063 AIDAQ96BJ3 306 aa12.63□□□□□ -0.39
RPL28-201ENST00000344063 SNRPA1P09661 255 aaKnown RBP12.63□□□□□ -0.39
RPL28-201ENST00000344063 TDO2P48775 406 aa12.63□□□□□ -0.39
RPL28-201ENST00000344063 C10orf67Q8IYJ2 551 aa12.63□□□□□ -0.39
RPL28-201ENST00000344063 UBAC1Q9BSL1 405 aa12.63□□□□□ -0.39
RPL28-201ENST00000344063 LRRC2Q9BYS8 371 aa12.63□□□□□ -0.39
RPL28-201ENST00000344063 RTL1A6NKG5 1358 aa12.62□□□□□ -0.39
RPL28-201ENST00000344063 ZNF213O14771 459 aa12.62□□□□□ -0.39
RPL28-201ENST00000344063 TOP1P11387 765 aaKnown RBP12.62□□□□□ -0.39
RPL28-201ENST00000344063 CASQ1P31415 396 aa12.62□□□□□ -0.39
RPL28-201ENST00000344063 NEO1Q92859 1461 aa12.62□□□□□ -0.39
RPL28-201ENST00000344063 ARHGAP29Q52LW3 1261 aa12.62□□□□□ -0.39
RPL28-201ENST00000344063 NUP133Q8WUM0 1156 aa12.62□□□□□ -0.39
RPL28-201ENST00000344063 RNF216Q9NWF9 866 aaPredicted RBP12.62□□□□□ -0.39
RPL28-201ENST00000344063 GNG11P61952 73 aa12.62□□□□□ -0.39
RPL28-201ENST00000344063 NMIQ13287 307 aaPredicted RBP12.62□□□□□ -0.39
RPL28-201ENST00000344063 KIF4BQ2VIQ3 1234 aa12.62□□□□□ -0.39
RPL28-201ENST00000344063 CEP131Q9UPN4 1083 aa12.62□□□□□ -0.39
RPL28-201ENST00000344063 GOLGA8BA8MQT2 603 aa12.62□□□□□ -0.39
RPL28-201ENST00000344063 SGSM2O43147 1006 aa12.62□□□□□ -0.39
RPL28-201ENST00000344063 ZSCAN12O43309 604 aa12.62□□□□□ -0.39
RPL28-201ENST00000344063 MCM6Q14566 821 aa12.62□□□□□ -0.39
RPL28-201ENST00000344063 JAKMIP3Q5VZ66 844 aa12.62□□□□□ -0.39
RPL28-201ENST00000344063 CREB3L3Q68CJ9 461 aa12.62□□□□□ -0.39
RPL28-201ENST00000344063 MAGEC2Q9UBF1 373 aaPredicted RBP12.62□□□□□ -0.39
RPL28-201ENST00000344063 CCDC171Q6TFL3 1326 aa12.62□□□□□ -0.39
RPL28-201ENST00000344063 PTCD1O75127 700 aaKnown RBP12.61□□□□□ -0.39
RPL28-201ENST00000344063 STARD3NLO95772 234 aa12.61□□□□□ -0.39
RPL28-201ENST00000344063 HOXC9P31274 260 aa12.61□□□□□ -0.39
RPL28-201ENST00000344063 SYT10Q6XYQ8 523 aa12.61□□□□□ -0.39
RPL28-201ENST00000344063 PHAXQ9H814 394 aaKnown RBP12.61□□□□□ -0.39
RPL28-201ENST00000344063 PA2G4Q9UQ80 394 aaKnown RBP12.61□□□□□ -0.39
RPL28-201ENST00000344063 IFIT5Q13325 482 aaKnown RBP12.61□□□□□ -0.39
RPL28-201ENST00000344063 ELF2Q15723 593 aa12.61□□□□□ -0.39
RPL28-201ENST00000344063 KLHL10Q6JEL2 608 aa12.61□□□□□ -0.39
RPL28-201ENST00000344063 AOPEPQ8N6M6 819 aa12.61□□□□□ -0.39
RPL28-201ENST00000344063 SIRT1Q96EB6 747 aa12.61□□□□□ -0.39
RPL28-201ENST00000344063 CCDC85AQ96PX6 553 aaPredicted RBP12.61□□□□□ -0.39
RPL28-201ENST00000344063 PHF23Q9BUL5 403 aaPredicted RBP12.61□□□□□ -0.39
RPL28-201ENST00000344063 RUFY3Q7L099 469 aa12.61□□□□□ -0.39
RPL28-201ENST00000344063 RAB11FIP4Q86YS3 637 aa12.61□□□□□ -0.39
RPL28-201ENST00000344063 AATKQ6ZMQ8 1374 aa12.61□□□□□ -0.39
RPL28-201ENST00000344063 ZFYVE16Q7Z3T8 1539 aa12.61□□□□□ -0.39
RPL28-201ENST00000344063 BRD1O95696 1058 aa12.61□□□□□ -0.39
RPL28-201ENST00000344063 DMTNQ08495 405 aa12.61□□□□□ -0.39
RPL28-201ENST00000344063 LRMPQ12912 555 aa12.61□□□□□ -0.39
RPL28-201ENST00000344063 MCMDC2Q4G0Z9 681 aa12.61□□□□□ -0.39
RPL28-201ENST00000344063 XAGE3Q8WTP9 111 aa12.61□□□□□ -0.39
RPL28-201ENST00000344063 RBM33Q96EV2 1170 aaKnown RBP12.61□□□□□ -0.39
RPL28-201ENST00000344063 CWC25Q9NXE8 425 aaPredicted RBP12.61□□□□□ -0.39
RPL28-201ENST00000344063 CCDC196A0A1B0GTZ2 297 aa12.6□□□□□ -0.39
RPL28-201ENST00000344063 ORC3Q9UBD5 711 aaPredicted RBP12.6□□□□□ -0.39
RPL28-201ENST00000344063 USP16Q9Y5T5 823 aa12.6□□□□□ -0.39
RPL28-201ENST00000344063 LAMC1P11047 1609 aa12.6□□□□□ -0.39
RPL28-201ENST00000344063 MAP3K4Q9Y6R4 1608 aa12.6□□□□□ -0.39
RPL28-201ENST00000344063 POLR3DP05423 398 aaPredicted RBP12.6□□□□□ -0.39
RPL28-201ENST00000344063 DDX46Q7L014 1031 aaKnown RBP12.6□□□□□ -0.39
RPL28-201ENST00000344063 CEP89Q96ST8 783 aa12.6□□□□□ -0.39
RPL28-201ENST00000344063 NSFL1CQ9UNZ2 370 aaKnown RBP12.6□□□□□ -0.39
RPL28-201ENST00000344063 SSH2Q76I76 1423 aa12.6□□□□□ -0.39
RPL28-201ENST00000344063 PNMA6EA0A0J9YXQ4 647 aa12.6□□□□□ -0.39
RPL28-201ENST00000344063 ATP5J2-PTCD1G3V325 749 aa12.6□□□□□ -0.39
RPL28-201ENST00000344063 KIAA0754O94854 1291 aa12.6□□□□□ -0.39
RPL28-201ENST00000344063 LIG1P18858 919 aa12.6□□□□□ -0.39
RPL28-201ENST00000344063 STIM1Q13586 685 aa12.6□□□□□ -0.39
RPL28-201ENST00000344063 COPS6Q7L5N1 327 aa12.6□□□□□ -0.39
RPL28-201ENST00000344063 KRT28Q7Z3Y7 464 aa12.6□□□□□ -0.39
RPL28-201ENST00000344063 ZNHIT6Q9NWK9 470 aaKnown RBP12.6□□□□□ -0.39
RPL28-201ENST00000344063 PLEKHG3A1L390 1219 aa12.6□□□□□ -0.39
RPL28-201ENST00000344063 ARHGEF10O15013 1369 aa12.59□□□□□ -0.39
RPL28-201ENST00000344063 CCDC191Q8NCU4 936 aa12.59□□□□□ -0.39
RPL28-201ENST00000344063 TBX22Q9Y458 520 aa12.59□□□□□ -0.39
RPL28-201ENST00000344063 FAM135BQ49AJ0 1406 aa12.59□□□□□ -0.39
RPL28-201ENST00000344063 NAPBQ9H115 298 aa12.59□□□□□ -0.39
RPL28-201ENST00000344063 SNX14Q9Y5W7 946 aa12.59□□□□□ -0.39
RPL28-201ENST00000344063 HSPA4P34932 840 aa12.59□□□□□ -0.39
RPL28-201ENST00000344063 PYCARDQ9ULZ3 195 aa12.59□□□□□ -0.39
RPL28-201ENST00000344063 Q6ZUG5 572 aa12.58□□□□□ -0.39
RPL28-201ENST00000344063 MTMR7Q9Y216 660 aa12.58□□□□□ -0.39
RPL28-201ENST00000344063 MLH3Q9UHC1 1453 aa12.58□□□□□ -0.39
RPL28-201ENST00000344063 CLTCL1P53675 1640 aa12.58□□□□□ -0.4
RPL28-201ENST00000344063 CFAP74Q9C0B2 1584 aa12.58□□□□□ -0.4
RPL28-201ENST00000344063 PHACTR2O75167 634 aa12.58□□□□□ -0.4
RPL28-201ENST00000344063 ZFYP08048 801 aaPredicted RBP12.58□□□□□ -0.4
RPL28-201ENST00000344063 LRP2BPQ9P2M1 347 aa12.58□□□□□ -0.4
RPL28-201ENST00000344063 ATP7BP35670 1465 aa12.58□□□□□ -0.4
RPL28-201ENST00000344063 GTF2A1P52655 376 aaPredicted RBP12.58□□□□□ -0.4
RPL28-201ENST00000344063 CCDC150Q8NCX0 1101 aa12.58□□□□□ -0.4
RPL28-201ENST00000344063 NCOA7Q8NI08 942 aa12.58□□□□□ -0.4
RPL28-201ENST00000344063 IP6K1Q92551 441 aa12.58□□□□□ -0.4
RPL28-201ENST00000344063 RSPH14Q9UHP6 348 aa12.58□□□□□ -0.4
RPL28-201ENST00000344063 LMOD1P29536 600 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 171.7 ms