RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 SEC62Q99442 399 aaKnown RBP17.81■□□□□ 0.44
VIPAS39-202ENST00000343765 MED23Q9ULK4 1368 aa17.81■□□□□ 0.44
VIPAS39-202ENST00000343765 ABCC6O95255 1503 aa17.81■□□□□ 0.44
VIPAS39-202ENST00000343765 F13A1P00488 732 aa17.81■□□□□ 0.44
VIPAS39-202ENST00000343765 RNF20Q5VTR2 975 aa17.81■□□□□ 0.44
VIPAS39-202ENST00000343765 BLOC1S2Q6QNY1 142 aa17.81■□□□□ 0.44
VIPAS39-202ENST00000343765 ARFGEF2Q9Y6D5 1785 aa17.81■□□□□ 0.44
VIPAS39-202ENST00000343765 ZSCAN31Q96LW9 406 aaPredicted RBP17.8■□□□□ 0.44
VIPAS39-202ENST00000343765 SH2B1Q9NRF2 756 aaPredicted RBP17.8■□□□□ 0.44
VIPAS39-202ENST00000343765 PSMA5P28066 241 aa17.8■□□□□ 0.44
VIPAS39-202ENST00000343765 CWC25Q9NXE8 425 aaPredicted RBP17.8■□□□□ 0.44
VIPAS39-202ENST00000343765 FOXO4P98177 505 aa17.79■□□□□ 0.44
VIPAS39-202ENST00000343765 STK3Q13188 491 aa17.79■□□□□ 0.44
VIPAS39-202ENST00000343765 SYAP1Q96A49 352 aaPredicted RBP17.79■□□□□ 0.44
VIPAS39-202ENST00000343765 TCHHQ07283 1943 aa17.79■□□□□ 0.44
VIPAS39-202ENST00000343765 TAF5LO75529 589 aa17.79■□□□□ 0.44
VIPAS39-202ENST00000343765 IL2RBP14784 551 aa17.79■□□□□ 0.44
VIPAS39-202ENST00000343765 ZNF594Q96JF6 807 aaPredicted RBP17.79■□□□□ 0.44
VIPAS39-202ENST00000343765 GLI3P10071 1580 aa17.79■□□□□ 0.44
VIPAS39-202ENST00000343765 COL15A1P39059 1388 aa17.79■□□□□ 0.44
VIPAS39-202ENST00000343765 SLFNL1Q499Z3 407 aa17.79■□□□□ 0.44
VIPAS39-202ENST00000343765 EVA1CP58658 441 aa17.78■□□□□ 0.44
VIPAS39-202ENST00000343765 DNM1Q05193 864 aaKnown RBP17.78■□□□□ 0.44
VIPAS39-202ENST00000343765 SNRKQ9NRH2 765 aa17.78■□□□□ 0.44
VIPAS39-202ENST00000343765 SLAIN2Q9P270 581 aa17.78■□□□□ 0.44
VIPAS39-202ENST00000343765 MTMR6Q9Y217 621 aa17.78■□□□□ 0.44
VIPAS39-202ENST00000343765 H7C1W4 665 aa17.78■□□□□ 0.44
VIPAS39-202ENST00000343765 TIMM10P62072 90 aa17.78■□□□□ 0.44
VIPAS39-202ENST00000343765 ZNF335Q9H4Z2 1342 aaPredicted RBP17.77■□□□□ 0.44
VIPAS39-202ENST00000343765 COL5A2P05997 1499 aaPredicted RBP17.77■□□□□ 0.44
VIPAS39-202ENST00000343765 ERVV-2B6SEH9 535 aa17.77■□□□□ 0.44
VIPAS39-202ENST00000343765 RPS6KB1P23443 525 aa17.77■□□□□ 0.44
VIPAS39-202ENST00000343765 TSPY26PQ9H489 355 aa17.77■□□□□ 0.44
VIPAS39-202ENST00000343765 ZNF609O15014 1411 aa17.77■□□□□ 0.43
VIPAS39-202ENST00000343765 NAP1L5Q96NT1 182 aaPredicted RBP17.77■□□□□ 0.43
VIPAS39-202ENST00000343765 GOLIM4O00461 696 aa17.76■□□□□ 0.43
VIPAS39-202ENST00000343765 LRRC24Q50LG9 513 aa17.76■□□□□ 0.43
VIPAS39-202ENST00000343765 FERMT3Q86UX7 667 aa17.76■□□□□ 0.43
VIPAS39-202ENST00000343765 CCDC85AQ96PX6 553 aaPredicted RBP17.76■□□□□ 0.43
VIPAS39-202ENST00000343765 HAUS7Q99871 368 aa17.76■□□□□ 0.43
VIPAS39-202ENST00000343765 ATG9AQ7Z3C6 839 aa17.76■□□□□ 0.43
VIPAS39-202ENST00000343765 LARP1BQ659C4 914 aaKnown RBP17.75■□□□□ 0.43
VIPAS39-202ENST00000343765 ATP6V1DQ9Y5K8 247 aa17.75■□□□□ 0.43
VIPAS39-202ENST00000343765 PLEKHG2Q9H7P9 1386 aa17.75■□□□□ 0.43
VIPAS39-202ENST00000343765 TOB2Q14106 344 aaPredicted RBP17.75■□□□□ 0.43
VIPAS39-202ENST00000343765 TMEM87AQ8NBN3 555 aa17.75■□□□□ 0.43
VIPAS39-202ENST00000343765 LAMB4A4D0S4 1761 aa17.75■□□□□ 0.43
VIPAS39-202ENST00000343765 CARD10Q9BWT7 1032 aa17.74■□□□□ 0.43
VIPAS39-202ENST00000343765 SOS2Q07890 1332 aaPredicted RBP17.74■□□□□ 0.43
VIPAS39-202ENST00000343765 HMG20BQ9P0W2 317 aa17.74■□□□□ 0.43
VIPAS39-202ENST00000343765 PHF14O94880 888 aa17.74■□□□□ 0.43
VIPAS39-202ENST00000343765 UBE2HP62256 183 aa17.74■□□□□ 0.43
VIPAS39-202ENST00000343765 MCMDC2Q4G0Z9 681 aa17.74■□□□□ 0.43
VIPAS39-202ENST00000343765 FAM173BQ6P4H8 233 aa17.74■□□□□ 0.43
VIPAS39-202ENST00000343765 CDC37L1Q7L3B6 337 aa17.74■□□□□ 0.43
VIPAS39-202ENST00000343765 LRRC2Q9BYS8 371 aa17.74■□□□□ 0.43
VIPAS39-202ENST00000343765 PUS3Q9BZE2 481 aaKnown RBP17.74■□□□□ 0.43
VIPAS39-202ENST00000343765 PARP4Q9UKK3 1724 aaKnown RBP17.73■□□□□ 0.43
VIPAS39-202ENST00000343765 KCPQ6ZWJ8 1503 aa17.73■□□□□ 0.43
VIPAS39-202ENST00000343765 XIRP1Q702N8 1843 aaKnown RBP17.73■□□□□ 0.43
VIPAS39-202ENST00000343765 ANKRD1Q15327 319 aa17.73■□□□□ 0.43
VIPAS39-202ENST00000343765 ZSCAN30Q86W11 494 aa17.73■□□□□ 0.43
VIPAS39-202ENST00000343765 CCDC191Q8NCU4 936 aa17.73■□□□□ 0.43
VIPAS39-202ENST00000343765 TMOD3Q9NYL9 352 aa17.73■□□□□ 0.43
VIPAS39-202ENST00000343765 CCDC183Q5T5S1 534 aa17.72■□□□□ 0.43
VIPAS39-202ENST00000343765 KBTBD3Q8NAB2 608 aa17.72■□□□□ 0.43
VIPAS39-202ENST00000343765 NEK1Q96PY6 1258 aa17.72■□□□□ 0.43
VIPAS39-202ENST00000343765 PAG1Q9NWQ8 432 aa17.72■□□□□ 0.43
VIPAS39-202ENST00000343765 JCADQ9P266 1359 aa17.72■□□□□ 0.43
VIPAS39-202ENST00000343765 CYP21A2P08686 494 aa17.72■□□□□ 0.43
VIPAS39-202ENST00000343765 HSP90B1P14625 803 aaKnown RBP17.72■□□□□ 0.43
VIPAS39-202ENST00000343765 NKX1-1Q15270 411 aaPredicted RBP17.72■□□□□ 0.43
VIPAS39-202ENST00000343765 DNAJC5Q9H3Z4 198 aa17.72■□□□□ 0.43
VIPAS39-202ENST00000343765 MSNP26038 577 aaKnown RBP17.71■□□□□ 0.43
VIPAS39-202ENST00000343765 IL15P40933 162 aaPredicted RBP17.71■□□□□ 0.43
VIPAS39-202ENST00000343765 USPL1Q5W0Q7 1092 aa17.71■□□□□ 0.43
VIPAS39-202ENST00000343765 PDLIM2Q96JY6 352 aa17.71■□□□□ 0.43
VIPAS39-202ENST00000343765 ASAP1Q9ULH1 1129 aa17.71■□□□□ 0.43
VIPAS39-202ENST00000343765 EYA2O00167 538 aa17.71■□□□□ 0.43
VIPAS39-202ENST00000343765 U3KPZ7 1027 aaPredicted RBP17.71■□□□□ 0.43
VIPAS39-202ENST00000343765 A0A1B0GUL7 405 aa17.7■□□□□ 0.42
VIPAS39-202ENST00000343765 Q6ZUG5 572 aa17.7■□□□□ 0.42
VIPAS39-202ENST00000343765 KAT6BQ8WYB5 2073 aa17.7■□□□□ 0.42
VIPAS39-202ENST00000343765 JAK2O60674 1132 aa17.7■□□□□ 0.42
VIPAS39-202ENST00000343765 FGD1P98174 961 aa17.7■□□□□ 0.42
VIPAS39-202ENST00000343765 KRT32Q14532 448 aa17.7■□□□□ 0.42
VIPAS39-202ENST00000343765 DNAJC10Q8IXB1 793 aa17.7■□□□□ 0.42
VIPAS39-202ENST00000343765 FAM89AQ96GI7 184 aa17.69■□□□□ 0.42
VIPAS39-202ENST00000343765 IFIT1P09914 478 aaKnown RBP17.69■□□□□ 0.42
VIPAS39-202ENST00000343765 TSGA10IPQ3SY00 556 aa17.69■□□□□ 0.42
VIPAS39-202ENST00000343765 A0A0G2JLW4 131 aa17.68■□□□□ 0.42
VIPAS39-202ENST00000343765 CCDC57Q2TAC2 916 aa17.68■□□□□ 0.42
VIPAS39-202ENST00000343765 FKBP4Q02790 459 aaKnown RBP eCLIP17.68■□□□□ 0.42
VIPAS39-202ENST00000343765 CSPP1Q1MSJ5 1256 aa17.68■□□□□ 0.42
VIPAS39-202ENST00000343765 GIMAP6Q6P9H5 292 aa17.68■□□□□ 0.42
VIPAS39-202ENST00000343765 STOX1Q6ZVD7 989 aa17.68■□□□□ 0.42
VIPAS39-202ENST00000343765 HCLS1P14317 486 aaPredicted RBP17.68■□□□□ 0.42
VIPAS39-202ENST00000343765 BRF1Q92994 677 aa17.68■□□□□ 0.42
VIPAS39-202ENST00000343765 DDX11Q96FC9 970 aa17.68■□□□□ 0.42
VIPAS39-202ENST00000343765 TJP1Q07157 1748 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms