RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 F13A1P00488 732 aa9.57□□□□□ -0.88
ATG4A-201ENST00000343524 GSDMDP57764 484 aa9.57□□□□□ -0.88
ATG4A-201ENST00000343524 MST1RQ04912 1400 aa9.57□□□□□ -0.88
ATG4A-201ENST00000343524 TYRO3Q06418 890 aa9.57□□□□□ -0.88
ATG4A-201ENST00000343524 GIMAP6Q6P9H5 292 aa9.57□□□□□ -0.88
ATG4A-201ENST00000343524 SARM1Q6SZW1 724 aa9.57□□□□□ -0.88
ATG4A-201ENST00000343524 LEKR1Q6ZMV7 388 aa9.57□□□□□ -0.88
ATG4A-201ENST00000343524 SIRT2Q8IXJ6 389 aa9.57□□□□□ -0.88
ATG4A-201ENST00000343524 C10orf67Q8IYJ2 551 aa9.57□□□□□ -0.88
ATG4A-201ENST00000343524 EXOC4Q96A65 974 aa9.57□□□□□ -0.88
ATG4A-201ENST00000343524 CHAMP1Q96JM3 812 aa9.57□□□□□ -0.88
ATG4A-201ENST00000343524 TRERF1Q96PN7 1200 aa9.57□□□□□ -0.88
ATG4A-201ENST00000343524 PLEKHF1Q96S99 279 aa9.57□□□□□ -0.88
ATG4A-201ENST00000343524 KRTAP3-3Q9BYR6 98 aa9.57□□□□□ -0.88
ATG4A-201ENST00000343524 KRTAP3-2Q9BYR7 98 aa9.57□□□□□ -0.88
ATG4A-201ENST00000343524 DDX19AQ9NUU7 478 aaKnown RBP9.57□□□□□ -0.88
ATG4A-201ENST00000343524 JRKLQ9Y4A0 524 aa9.57□□□□□ -0.88
ATG4A-201ENST00000343524 PLEKHG2Q9H7P9 1386 aa9.57□□□□□ -0.88
ATG4A-201ENST00000343524 PLEKHG1Q9ULL1 1385 aa9.57□□□□□ -0.88
ATG4A-201ENST00000343524 FAM205CA6NFA0 338 aa9.56□□□□□ -0.88
ATG4A-201ENST00000343524 STX6O43752 255 aa9.56□□□□□ -0.88
ATG4A-201ENST00000343524 CCDC172P0C7W6 258 aa9.56□□□□□ -0.88
ATG4A-201ENST00000343524 MAGEA9P43362 315 aa9.56□□□□□ -0.88
ATG4A-201ENST00000343524 KCNJ6P48051 423 aa9.56□□□□□ -0.88
ATG4A-201ENST00000343524 MRPL50Q8N5N7 158 aaKnown RBP9.56□□□□□ -0.88
ATG4A-201ENST00000343524 PPM1EQ8WY54 764 aa9.56□□□□□ -0.88
ATG4A-201ENST00000343524 GTF3C6Q969F1 213 aa9.56□□□□□ -0.88
ATG4A-201ENST00000343524 MRFAP1L1Q96HT8 127 aa9.56□□□□□ -0.88
ATG4A-201ENST00000343524 ZNF446Q9NWS9 450 aa9.56□□□□□ -0.88
ATG4A-201ENST00000343524 RRP15Q9Y3B9 282 aaKnown RBP9.56□□□□□ -0.88
ATG4A-201ENST00000343524 CEP83Q9Y592 693 aa9.56□□□□□ -0.88
ATG4A-201ENST00000343524 IDI1Q13907 227 aa9.56□□□□□ -0.88
ATG4A-201ENST00000343524 NAA30Q147X3 362 aaPredicted RBP9.56□□□□□ -0.88
ATG4A-201ENST00000343524 TMEM132AQ24JP5 1023 aa9.56□□□□□ -0.88
ATG4A-201ENST00000343524 RPAINQ86UA6 219 aa9.56□□□□□ -0.88
ATG4A-201ENST00000343524 ANKRD44Q8N8A2 993 aa9.56□□□□□ -0.88
ATG4A-201ENST00000343524 DDX17Q92841 729 aaKnown RBP9.56□□□□□ -0.88
ATG4A-201ENST00000343524 GLI3P10071 1580 aa9.55□□□□□ -0.88
ATG4A-201ENST00000343524 FIBPO43427 364 aa9.55□□□□□ -0.88
ATG4A-201ENST00000343524 HMMRO75330 724 aa9.55□□□□□ -0.88
ATG4A-201ENST00000343524 ZRANB2O95218 330 aaKnown RBP eCLIP9.55□□□□□ -0.88
ATG4A-201ENST00000343524 PLA2G4AP47712 749 aa9.55□□□□□ -0.88
ATG4A-201ENST00000343524 SRPK2P78362 688 aaKnown RBP9.55□□□□□ -0.88
ATG4A-201ENST00000343524 LRMPQ12912 555 aa9.55□□□□□ -0.88
ATG4A-201ENST00000343524 LRRC8AQ8IWT6 810 aa9.55□□□□□ -0.88
ATG4A-201ENST00000343524 SUGP1Q8IWZ8 645 aaKnown RBP9.55□□□□□ -0.88
ATG4A-201ENST00000343524 NEK11Q8NG66 645 aa9.55□□□□□ -0.88
ATG4A-201ENST00000343524 C1orf115Q9H7X2 142 aa9.55□□□□□ -0.88
ATG4A-201ENST00000343524 MRVI1Q9Y6F6 885 aa9.55□□□□□ -0.88
ATG4A-201ENST00000343524 AATKQ6ZMQ8 1374 aa9.55□□□□□ -0.88
ATG4A-201ENST00000343524 ADGRL3Q9HAR2 1447 aa9.55□□□□□ -0.88
ATG4A-201ENST00000343524 ATP10DQ9P241 1426 aa9.55□□□□□ -0.88
ATG4A-201ENST00000343524 TUBGCP6Q96RT7 1819 aa9.55□□□□□ -0.88
ATG4A-201ENST00000343524 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.54□□□□□ -0.88
ATG4A-201ENST00000343524 GOLGA6L19H0YKK7 550 aa9.54□□□□□ -0.88
ATG4A-201ENST00000343524 ATP2B1P20020 1258 aa9.54□□□□□ -0.88
ATG4A-201ENST00000343524 UBXN4Q92575 508 aa9.54□□□□□ -0.88
ATG4A-201ENST00000343524 ESYT1Q9BSJ8 1104 aa9.54□□□□□ -0.88
ATG4A-201ENST00000343524 FAM107BQ9H098 131 aa9.54□□□□□ -0.88
ATG4A-201ENST00000343524 ST7Q9NRC1 585 aa9.54□□□□□ -0.88
ATG4A-201ENST00000343524 ATG3Q9NT62 314 aa9.54□□□□□ -0.88
ATG4A-201ENST00000343524 NRXN1Q9ULB1 1477 aa9.54□□□□□ -0.88
ATG4A-201ENST00000343524 KIF1BO60333 1816 aa9.54□□□□□ -0.88
ATG4A-201ENST00000343524 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.54□□□□□ -0.88
ATG4A-201ENST00000343524 ERBB3P21860 1342 aa9.54□□□□□ -0.88
ATG4A-201ENST00000343524 LOC102724159A0A0B4J2E5 919 aa9.54□□□□□ -0.88
ATG4A-201ENST00000343524 SNW1Q13573 536 aaKnown RBP9.54□□□□□ -0.88
ATG4A-201ENST00000343524 PWP2Q15269 919 aaKnown RBP9.54□□□□□ -0.88
ATG4A-201ENST00000343524 ZRSR1Q15695 479 aaKnown RBP9.54□□□□□ -0.88
ATG4A-201ENST00000343524 CCDC158Q5M9N0 1113 aa9.54□□□□□ -0.88
ATG4A-201ENST00000343524 SWT1Q5T5J6 900 aaKnown RBP9.54□□□□□ -0.88
ATG4A-201ENST00000343524 CCAR2Q8N163 923 aaKnown RBP9.54□□□□□ -0.88
ATG4A-201ENST00000343524 CACTINQ8WUQ7 758 aaKnown RBP9.54□□□□□ -0.88
ATG4A-201ENST00000343524 SIRT1Q96EB6 747 aa9.54□□□□□ -0.88
ATG4A-201ENST00000343524 MS4A4AQ96JQ5 239 aa9.54□□□□□ -0.88
ATG4A-201ENST00000343524 TACO1Q9BSH4 297 aaKnown RBP9.54□□□□□ -0.88
ATG4A-201ENST00000343524 UBXN6Q9BZV1 441 aa9.54□□□□□ -0.88
ATG4A-201ENST00000343524 TNMDQ9H2S6 317 aa9.54□□□□□ -0.88
ATG4A-201ENST00000343524 CBX8Q9HC52 389 aa9.54□□□□□ -0.88
ATG4A-201ENST00000343524 MKRN1Q9UHC7 482 aaKnown RBP9.54□□□□□ -0.88
ATG4A-201ENST00000343524 SMC3Q9UQE7 1217 aa9.54□□□□□ -0.88
ATG4A-201ENST00000343524 COL22A1Q8NFW1 1626 aaPredicted RBP9.54□□□□□ -0.88
ATG4A-201ENST00000343524 ADGRB3O60242 1522 aa9.54□□□□□ -0.88
ATG4A-201ENST00000343524 RPS6KA5O75582 802 aa9.53□□□□□ -0.88
ATG4A-201ENST00000343524 SKILP12757 684 aa9.53□□□□□ -0.88
ATG4A-201ENST00000343524 CALRP27797 417 aaKnown RBP9.53□□□□□ -0.88
ATG4A-201ENST00000343524 ACTN2P35609 894 aa9.53□□□□□ -0.88
ATG4A-201ENST00000343524 USP8P40818 1118 aa9.53□□□□□ -0.88
ATG4A-201ENST00000343524 KRT85P78386 507 aa9.53□□□□□ -0.88
ATG4A-201ENST00000343524 ARHGAP29Q52LW3 1261 aa9.53□□□□□ -0.88
ATG4A-201ENST00000343524 JAKMIP3Q5VZ66 844 aa9.53□□□□□ -0.88
ATG4A-201ENST00000343524 TMEM92Q6UXU6 159 aa9.53□□□□□ -0.88
ATG4A-201ENST00000343524 RBM43Q6ZSC3 357 aaKnown RBP9.53□□□□□ -0.88
ATG4A-201ENST00000343524 MICALL2Q8IY33 904 aa9.53□□□□□ -0.88
ATG4A-201ENST00000343524 BANK1Q8NDB2 785 aa9.53□□□□□ -0.88
ATG4A-201ENST00000343524 ZFYVE9O95405 1425 aa9.53□□□□□ -0.88
ATG4A-201ENST00000343524 PHLPP2Q6ZVD8 1323 aa9.53□□□□□ -0.88
ATG4A-201ENST00000343524 TTC21BQ7Z4L5 1316 aa9.53□□□□□ -0.88
ATG4A-201ENST00000343524 HOXB1P14653 301 aaPredicted RBP9.52□□□□□ -0.88
ATG4A-201ENST00000343524 OAS2P29728 719 aaKnown RBP9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms