RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 MPHOSPH10O00566 681 aaKnown RBP9.32□□□□□ -0.92
UBE4B-202ENST00000343090 HMG20BQ9P0W2 317 aa9.32□□□□□ -0.92
UBE4B-202ENST00000343090 CHMLP26374 656 aa9.32□□□□□ -0.92
UBE4B-202ENST00000343090 CASQ1P31415 396 aa9.32□□□□□ -0.92
UBE4B-202ENST00000343090 METAP2P50579 478 aaKnown RBP eCLIP9.32□□□□□ -0.92
UBE4B-202ENST00000343090 KSR2Q6VAB6 950 aa9.32□□□□□ -0.92
UBE4B-202ENST00000343090 CCDC186Q7Z3E2 898 aa9.32□□□□□ -0.92
UBE4B-202ENST00000343090 CTCFLQ8NI51 663 aaPredicted RBP9.32□□□□□ -0.92
UBE4B-202ENST00000343090 ANAPC15P60006 121 aa9.32□□□□□ -0.92
UBE4B-202ENST00000343090 NPATQ14207 1427 aa9.31□□□□□ -0.92
UBE4B-202ENST00000343090 CCDC196A0A1B0GTZ2 297 aa9.31□□□□□ -0.92
UBE4B-202ENST00000343090 ZSCAN12O43309 604 aa9.31□□□□□ -0.92
UBE4B-202ENST00000343090 C10orf67Q8IYJ2 551 aa9.31□□□□□ -0.92
UBE4B-202ENST00000343090 DNAJC25Q9H1X3 360 aa9.31□□□□□ -0.92
UBE4B-202ENST00000343090 TTC21AQ8NDW8 1320 aa9.31□□□□□ -0.92
UBE4B-202ENST00000343090 DNA2P51530 1060 aa9.31□□□□□ -0.92
UBE4B-202ENST00000343090 ENOX2Q16206 610 aaKnown RBP9.31□□□□□ -0.92
UBE4B-202ENST00000343090 KIF4BQ2VIQ3 1234 aa9.31□□□□□ -0.92
UBE4B-202ENST00000343090 DHX37Q8IY37 1157 aaKnown RBP9.31□□□□□ -0.92
UBE4B-202ENST00000343090 GIMAP7Q8NHV1 300 aa9.31□□□□□ -0.92
UBE4B-202ENST00000343090 RASSF4Q9H2L5 321 aa9.31□□□□□ -0.92
UBE4B-202ENST00000343090 ANKIB1Q9P2G1 1089 aa9.31□□□□□ -0.92
UBE4B-202ENST00000343090 IQSEC3Q9UPP2 1182 aaPredicted RBP9.31□□□□□ -0.92
UBE4B-202ENST00000343090 NLRP5P59047 1200 aa9.31□□□□□ -0.92
UBE4B-202ENST00000343090 DZIP1Q86YF9 867 aaKnown RBP9.31□□□□□ -0.92
UBE4B-202ENST00000343090 NCOA7Q8NI08 942 aa9.31□□□□□ -0.92
UBE4B-202ENST00000343090 BMP2KQ9NSY1 1161 aaPredicted RBP9.31□□□□□ -0.92
UBE4B-202ENST00000343090 ZNF518AQ6AHZ1 1483 aa9.31□□□□□ -0.92
UBE4B-202ENST00000343090 DISP1Q96F81 1524 aa9.31□□□□□ -0.92
UBE4B-202ENST00000343090 TMEM132AQ24JP5 1023 aa9.31□□□□□ -0.92
UBE4B-202ENST00000343090 IQCA1Q86XH1 822 aa9.31□□□□□ -0.92
UBE4B-202ENST00000343090 PPP1R1BQ9UD71 204 aaPredicted RBP9.31□□□□□ -0.92
UBE4B-202ENST00000343090 MAGI3Q5TCQ9 1506 aa9.3□□□□□ -0.92
UBE4B-202ENST00000343090 WDR7Q9Y4E6 1490 aa9.3□□□□□ -0.92
UBE4B-202ENST00000343090 CCDC191Q8NCU4 936 aa9.3□□□□□ -0.92
UBE4B-202ENST00000343090 CABLES1Q8TDN4 633 aa9.3□□□□□ -0.92
UBE4B-202ENST00000343090 CNKSR2Q8WXI2 1034 aa9.3□□□□□ -0.92
UBE4B-202ENST00000343090 NUP88Q99567 741 aaPredicted RBP9.3□□□□□ -0.92
UBE4B-202ENST00000343090 UHRF1BP1LA0JNW5 1464 aa9.3□□□□□ -0.92
UBE4B-202ENST00000343090 PTGS1P23219 599 aa9.3□□□□□ -0.92
UBE4B-202ENST00000343090 MARCKSP29966 332 aaPredicted RBP9.3□□□□□ -0.92
UBE4B-202ENST00000343090 NFATC2IPQ8NCF5 419 aa9.3□□□□□ -0.92
UBE4B-202ENST00000343090 LUC7LQ9NQ29 371 aaKnown RBP9.3□□□□□ -0.92
UBE4B-202ENST00000343090 KIF5CO60282 957 aa9.3□□□□□ -0.92
UBE4B-202ENST00000343090 KIAA0754O94854 1291 aa9.3□□□□□ -0.92
UBE4B-202ENST00000343090 ZNF76P36508 570 aa9.3□□□□□ -0.92
UBE4B-202ENST00000343090 MCMDC2Q4G0Z9 681 aa9.3□□□□□ -0.92
UBE4B-202ENST00000343090 AKAP4Q5JQC9 854 aa9.3□□□□□ -0.92
UBE4B-202ENST00000343090 ZSWIM4Q9H7M6 989 aa9.3□□□□□ -0.92
UBE4B-202ENST00000343090 MAP3K19Q56UN5 1328 aa9.29□□□□□ -0.92
UBE4B-202ENST00000343090 CREB3L3Q68CJ9 461 aa9.29□□□□□ -0.92
UBE4B-202ENST00000343090 GTF3C6Q969F1 213 aa9.29□□□□□ -0.92
UBE4B-202ENST00000343090 SEC63Q9UGP8 760 aaKnown RBP9.29□□□□□ -0.92
UBE4B-202ENST00000343090 ZNF652Q9Y2D9 606 aa9.29□□□□□ -0.92
UBE4B-202ENST00000343090 BLMP54132 1417 aaPredicted RBP9.29□□□□□ -0.92
UBE4B-202ENST00000343090 ALDH1L1O75891 902 aa9.29□□□□□ -0.92
UBE4B-202ENST00000343090 IL13P35225 146 aa9.29□□□□□ -0.92
UBE4B-202ENST00000343090 SNW1Q13573 536 aaKnown RBP9.29□□□□□ -0.92
UBE4B-202ENST00000343090 MFSD6Q6ZSS7 791 aa9.29□□□□□ -0.92
UBE4B-202ENST00000343090 ZSCAN16Q9H4T2 348 aaPredicted RBP9.29□□□□□ -0.92
UBE4B-202ENST00000343090 MYO6Q9UM54 1294 aa9.29□□□□□ -0.92
UBE4B-202ENST00000343090 FLT4P35916 1363 aa9.29□□□□□ -0.92
UBE4B-202ENST00000343090 GOLGA6L10A6NI86 522 aa9.29□□□□□ -0.92
UBE4B-202ENST00000343090 CATIPQ7Z7H3 387 aa9.29□□□□□ -0.92
UBE4B-202ENST00000343090 CERS3Q8IU89 383 aa9.29□□□□□ -0.92
UBE4B-202ENST00000343090 LMBRD1Q9NUN5 540 aa9.29□□□□□ -0.92
UBE4B-202ENST00000343090 CCDC171Q6TFL3 1326 aa9.29□□□□□ -0.92
UBE4B-202ENST00000343090 ABCC10Q5T3U5 1492 aa9.29□□□□□ -0.92
UBE4B-202ENST00000343090 ZPR1O75312 459 aa9.29□□□□□ -0.92
UBE4B-202ENST00000343090 APOBRQ0VD83 1088 aa9.29□□□□□ -0.92
UBE4B-202ENST00000343090 TFCP2Q12800 502 aa9.29□□□□□ -0.92
UBE4B-202ENST00000343090 CCDC148Q8NFR7 591 aa9.29□□□□□ -0.92
UBE4B-202ENST00000343090 YTHDC2Q9H6S0 1430 aaKnown RBP9.29□□□□□ -0.92
UBE4B-202ENST00000343090 SOS1Q07889 1333 aaPredicted RBP9.28□□□□□ -0.92
UBE4B-202ENST00000343090 NEMFO60524 1076 aa9.28□□□□□ -0.92
UBE4B-202ENST00000343090 AOPEPQ8N6M6 819 aa9.28□□□□□ -0.92
UBE4B-202ENST00000343090 RNF41Q9H4P4 317 aaPredicted RBP9.28□□□□□ -0.92
UBE4B-202ENST00000343090 BICC1Q9H694 974 aaKnown RBP9.28□□□□□ -0.92
UBE4B-202ENST00000343090 VAT1LQ9HCJ6 419 aa9.28□□□□□ -0.92
UBE4B-202ENST00000343090 CCDC194A0A1B0GVG4 234 aa9.28□□□□□ -0.92
UBE4B-202ENST00000343090 IBSPP21815 317 aaPredicted RBP9.28□□□□□ -0.92
UBE4B-202ENST00000343090 ZNF444Q8N0Y2 327 aaPredicted RBP9.28□□□□□ -0.92
UBE4B-202ENST00000343090 FAM200AQ8TCP9 573 aa9.28□□□□□ -0.92
UBE4B-202ENST00000343090 ALG1Q9BT22 464 aa9.28□□□□□ -0.92
UBE4B-202ENST00000343090 SYKP43405 635 aa9.28□□□□□ -0.92
UBE4B-202ENST00000343090 GSDMDP57764 484 aa9.28□□□□□ -0.92
UBE4B-202ENST00000343090 MAP3K5Q99683 1374 aa9.28□□□□□ -0.92
UBE4B-202ENST00000343090 SLU7O95391 586 aaKnown RBP9.28□□□□□ -0.92
UBE4B-202ENST00000343090 TTF1Q15361 905 aaPredicted RBP9.28□□□□□ -0.92
UBE4B-202ENST00000343090 CCDC102BQ68D86 513 aa9.28□□□□□ -0.92
UBE4B-202ENST00000343090 KLHDC4Q8TBB5 520 aa9.28□□□□□ -0.92
UBE4B-202ENST00000343090 PUS7Q96PZ0 661 aaKnown RBP9.28□□□□□ -0.92
UBE4B-202ENST00000343090 UBA5Q9GZZ9 404 aa9.28□□□□□ -0.92
UBE4B-202ENST00000343090 ZFYVE9O95405 1425 aa9.28□□□□□ -0.92
UBE4B-202ENST00000343090 SBNO2Q9Y2G9 1366 aa9.27□□□□□ -0.92
UBE4B-202ENST00000343090 AFMP43652 599 aa9.27□□□□□ -0.92
UBE4B-202ENST00000343090 TYRO3Q06418 890 aa9.27□□□□□ -0.92
UBE4B-202ENST00000343090 SPA17Q15506 151 aa9.27□□□□□ -0.92
UBE4B-202ENST00000343090 LINS1Q8NG48 757 aa9.27□□□□□ -0.92
UBE4B-202ENST00000343090 EXOC5O00471 708 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms