RNA–Protein interactions for RNA: ENST00000341421.7

TRAK1-202, Transcript of trafficking kinesin protein 1, humanhuman

TSL 1 (best) BASIC

Gene TRAK1, Length 4,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-202ENST00000341421 DNM1Q05193 864 aaKnown RBP13.69□□□□□ -0.22
TRAK1-202ENST00000341421 TRIM22Q8IYM9 498 aa13.69□□□□□ -0.22
TRAK1-202ENST00000341421 CWC15Q9P013 229 aaKnown RBP13.69□□□□□ -0.22
TRAK1-202ENST00000341421 PAXBP1Q9Y5B6 917 aa13.69□□□□□ -0.22
TRAK1-202ENST00000341421 FRMPD1Q5SYB0 1578 aa13.69□□□□□ -0.22
TRAK1-202ENST00000341421 NBPF6Q5VWK0 638 aa13.69□□□□□ -0.22
TRAK1-202ENST00000341421 GIMAP6Q6P9H5 292 aa13.69□□□□□ -0.22
TRAK1-202ENST00000341421 NBPF4Q96M43 638 aa13.69□□□□□ -0.22
TRAK1-202ENST00000341421 NEMFO60524 1076 aa13.68□□□□□ -0.22
TRAK1-202ENST00000341421 TFIP11Q9UBB9 837 aaKnown RBP13.68□□□□□ -0.22
TRAK1-202ENST00000341421 SMTNL1A8MU46 457 aa13.68□□□□□ -0.22
TRAK1-202ENST00000341421 CADPS2Q86UW7 1296 aa13.68□□□□□ -0.22
TRAK1-202ENST00000341421 BICC1Q9H694 974 aaKnown RBP13.68□□□□□ -0.22
TRAK1-202ENST00000341421 AGLP35573 1532 aa13.68□□□□□ -0.22
TRAK1-202ENST00000341421 GOLIM4O00461 696 aa13.68□□□□□ -0.22
TRAK1-202ENST00000341421 TSR1Q2NL82 804 aaKnown RBP13.68□□□□□ -0.22
TRAK1-202ENST00000341421 HSP90AB3PQ58FF7 597 aa13.68□□□□□ -0.22
TRAK1-202ENST00000341421 NOC3LQ8WTT2 800 aaKnown RBP13.68□□□□□ -0.22
TRAK1-202ENST00000341421 TEX13AQ9BXU3 409 aaPredicted RBP13.68□□□□□ -0.22
TRAK1-202ENST00000341421 ADGRB2O60241 1585 aa13.68□□□□□ -0.22
TRAK1-202ENST00000341421 ATP5J2-PTCD1G3V325 749 aa13.68□□□□□ -0.22
TRAK1-202ENST00000341421 PTCD1O75127 700 aaKnown RBP13.68□□□□□ -0.22
TRAK1-202ENST00000341421 DDIT3P35638 169 aa13.68□□□□□ -0.22
TRAK1-202ENST00000341421 IL15P40933 162 aaPredicted RBP13.68□□□□□ -0.22
TRAK1-202ENST00000341421 IFIT5Q13325 482 aaKnown RBP13.68□□□□□ -0.22
TRAK1-202ENST00000341421 AMOTL1Q8IY63 956 aa13.68□□□□□ -0.22
TRAK1-202ENST00000341421 WASF1Q92558 559 aa13.68□□□□□ -0.22
TRAK1-202ENST00000341421 DCAF5Q96JK2 942 aa13.68□□□□□ -0.22
TRAK1-202ENST00000341421 ZFYP08048 801 aaPredicted RBP13.67□□□□□ -0.22
TRAK1-202ENST00000341421 CUL4AQ13619 759 aa13.67□□□□□ -0.22
TRAK1-202ENST00000341421 CKAP2LQ8IYA6 745 aa13.67□□□□□ -0.22
TRAK1-202ENST00000341421 C17orf53Q8N3J3 647 aaPredicted RBP13.67□□□□□ -0.22
TRAK1-202ENST00000341421 C8orf76Q96K31 380 aa13.67□□□□□ -0.22
TRAK1-202ENST00000341421 CDC42BPGQ6DT37 1551 aa13.67□□□□□ -0.22
TRAK1-202ENST00000341421 ARHGEF28Q8N1W1 1705 aaKnown RBP13.67□□□□□ -0.22
TRAK1-202ENST00000341421 NCOA3Q9Y6Q9 1424 aa13.67□□□□□ -0.22
TRAK1-202ENST00000341421 KIF2AO00139 706 aaPredicted RBP13.67□□□□□ -0.22
TRAK1-202ENST00000341421 CBFA2T2O43439 604 aa13.67□□□□□ -0.22
TRAK1-202ENST00000341421 SLC39A6Q13433 755 aa13.67□□□□□ -0.22
TRAK1-202ENST00000341421 METTL24Q5JXM2 366 aa13.67□□□□□ -0.22
TRAK1-202ENST00000341421 BEND3Q5T5X7 828 aa13.67□□□□□ -0.22
TRAK1-202ENST00000341421 COL3A1P02461 1466 aaPredicted RBP13.67□□□□□ -0.22
TRAK1-202ENST00000341421 KDM4AO75164 1064 aa13.67□□□□□ -0.22
TRAK1-202ENST00000341421 ZNF165P49910 485 aa13.67□□□□□ -0.22
TRAK1-202ENST00000341421 DACH1Q9UI36 760 aa13.67□□□□□ -0.22
TRAK1-202ENST00000341421 ANKARQ7Z5J8 1434 aa13.67□□□□□ -0.22
TRAK1-202ENST00000341421 ZSCAN20P17040 1043 aaPredicted RBP13.67□□□□□ -0.22
TRAK1-202ENST00000341421 BRF1Q92994 677 aa13.67□□□□□ -0.22
TRAK1-202ENST00000341421 STX1AQ16623 288 aa13.66□□□□□ -0.22
TRAK1-202ENST00000341421 TMOD3Q9NYL9 352 aa13.66□□□□□ -0.22
TRAK1-202ENST00000341421 KDRP35968 1356 aa13.66□□□□□ -0.22
TRAK1-202ENST00000341421 ZNF790Q6PG37 636 aa13.66□□□□□ -0.22
TRAK1-202ENST00000341421 MNS1Q8NEH6 495 aa13.66□□□□□ -0.22
TRAK1-202ENST00000341421 C19orf44Q9H6X5 657 aa13.66□□□□□ -0.22
TRAK1-202ENST00000341421 CCDC69A6NI79 296 aa13.66□□□□□ -0.22
TRAK1-202ENST00000341421 PKP1Q13835 747 aa13.66□□□□□ -0.22
TRAK1-202ENST00000341421 PALD1Q9ULE6 856 aa13.66□□□□□ -0.22
TRAK1-202ENST00000341421 PREX1Q8TCU6 1659 aa13.65□□□□□ -0.22
TRAK1-202ENST00000341421 NOM1Q5C9Z4 860 aaKnown RBP13.65□□□□□ -0.22
TRAK1-202ENST00000341421 LMBR1LQ6UX01 489 aa13.65□□□□□ -0.22
TRAK1-202ENST00000341421 DDX46Q7L014 1031 aaKnown RBP13.65□□□□□ -0.22
TRAK1-202ENST00000341421 METTL22Q9BUU2 404 aaPredicted RBP13.65□□□□□ -0.22
TRAK1-202ENST00000341421 ZNF213O14771 459 aa13.65□□□□□ -0.22
TRAK1-202ENST00000341421 CCDC47Q96A33 483 aaKnown RBP13.65□□□□□ -0.22
TRAK1-202ENST00000341421 GNL3LQ9NVN8 582 aaKnown RBP13.65□□□□□ -0.22
TRAK1-202ENST00000341421 TSPOAP1O95153 1857 aa13.65□□□□□ -0.22
TRAK1-202ENST00000341421 PTPN14Q15678 1187 aa13.65□□□□□ -0.22
TRAK1-202ENST00000341421 NFATC2IPQ8NCF5 419 aa13.65□□□□□ -0.22
TRAK1-202ENST00000341421 MPHOSPH8Q99549 860 aa13.65□□□□□ -0.22
TRAK1-202ENST00000341421 NOL10Q9BSC4 688 aaKnown RBP13.65□□□□□ -0.22
TRAK1-202ENST00000341421 CLIP2Q9UDT6 1046 aa13.65□□□□□ -0.22
TRAK1-202ENST00000341421 USP31Q70CQ4 1352 aa13.65□□□□□ -0.23
TRAK1-202ENST00000341421 GIGYF1O75420 1035 aaPredicted RBP13.64□□□□□ -0.23
TRAK1-202ENST00000341421 RPS6KB1P23443 525 aa13.64□□□□□ -0.23
TRAK1-202ENST00000341421 FILIP1Q7Z7B0 1213 aa13.64□□□□□ -0.23
TRAK1-202ENST00000341421 SLC27A2O14975 620 aa13.64□□□□□ -0.23
TRAK1-202ENST00000341421 IDH1O75874 414 aaKnown RBP13.64□□□□□ -0.23
TRAK1-202ENST00000341421 SERPINC1P01008 464 aa13.64□□□□□ -0.23
TRAK1-202ENST00000341421 TTF1Q15361 905 aaPredicted RBP13.64□□□□□ -0.23
TRAK1-202ENST00000341421 Q6ZUG5 572 aa13.64□□□□□ -0.23
TRAK1-202ENST00000341421 FSIP1Q8NA03 581 aa13.64□□□□□ -0.23
TRAK1-202ENST00000341421 AIDAQ96BJ3 306 aa13.64□□□□□ -0.23
TRAK1-202ENST00000341421 TCEANC2Q96MN5 208 aa13.64□□□□□ -0.23
TRAK1-202ENST00000341421 ZBTB3Q9H5J0 574 aa13.64□□□□□ -0.23
TRAK1-202ENST00000341421 DACT1Q9NYF0 836 aa13.64□□□□□ -0.23
TRAK1-202ENST00000341421 VGLL3A8MV65 326 aa13.63□□□□□ -0.23
TRAK1-202ENST00000341421 ATL3Q6DD88 541 aa13.63□□□□□ -0.23
TRAK1-202ENST00000341421 KIF2CQ99661 725 aa13.63□□□□□ -0.23
TRAK1-202ENST00000341421 CCT2P78371 535 aaKnown RBP13.63□□□□□ -0.23
TRAK1-202ENST00000341421 KLHL34Q8N239 644 aa13.63□□□□□ -0.23
TRAK1-202ENST00000341421 SUCLG2Q96I99 432 aa13.63□□□□□ -0.23
TRAK1-202ENST00000341421 ZNF397Q8NF99 534 aaPredicted RBP13.63□□□□□ -0.23
TRAK1-202ENST00000341421 PAG1Q9NWQ8 432 aa13.63□□□□□ -0.23
TRAK1-202ENST00000341421 GOLGA8BA8MQT2 603 aa13.62□□□□□ -0.23
TRAK1-202ENST00000341421 GSDMDP57764 484 aa13.62□□□□□ -0.23
TRAK1-202ENST00000341421 RRP12Q5JTH9 1297 aaKnown RBP13.62□□□□□ -0.23
TRAK1-202ENST00000341421 CCAR1Q8IX12 1150 aaKnown RBP13.62□□□□□ -0.23
TRAK1-202ENST00000341421 NCOA7Q8NI08 942 aa13.62□□□□□ -0.23
TRAK1-202ENST00000341421 KIF18AQ8NI77 898 aa13.62□□□□□ -0.23
TRAK1-202ENST00000341421 TYRO3Q06418 890 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms