RNA–Protein interactions for RNA: ENST00000341062.6

TRIM60-201, Transcript of tripartite motif containing 60, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM60, Length 1,867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60-201ENST00000341062 TTC41PQ6P2S7 1318 aa16.3■□□□□ 0.2
TRIM60-201ENST00000341062 RILPL2Q969X0 211 aa16.3■□□□□ 0.2
TRIM60-201ENST00000341062 FOXD4L1Q9NU39 408 aa16.3■□□□□ 0.2
TRIM60-201ENST00000341062 BRPF3Q9ULD4 1205 aa16.3■□□□□ 0.2
TRIM60-201ENST00000341062 SCN7AQ01118 1682 aa16.29■□□□□ 0.2
TRIM60-201ENST00000341062 PNPLA7Q6ZV29 1317 aa16.29■□□□□ 0.2
TRIM60-201ENST00000341062 RIC3Q7Z5B4 369 aa16.29■□□□□ 0.2
TRIM60-201ENST00000341062 COL23A1Q86Y22 540 aaPredicted RBP16.29■□□□□ 0.2
TRIM60-201ENST00000341062 NUTM1Q86Y26 1132 aa16.29■□□□□ 0.2
TRIM60-201ENST00000341062 MYD88Q99836 296 aa16.29■□□□□ 0.2
TRIM60-201ENST00000341062 C9orf78Q9NZ63 289 aaPredicted RBP16.29■□□□□ 0.2
TRIM60-201ENST00000341062 ISY1Q9ULR0 285 aaKnown RBP16.29■□□□□ 0.2
TRIM60-201ENST00000341062 RTCBQ9Y3I0 505 aaKnown RBP16.29■□□□□ 0.2
TRIM60-201ENST00000341062 MAP3K15Q6ZN16 1313 aa16.29■□□□□ 0.2
TRIM60-201ENST00000341062 USPL1Q5W0Q7 1092 aa16.29■□□□□ 0.2
TRIM60-201ENST00000341062 ERC1Q8IUD2 1116 aa16.29■□□□□ 0.2
TRIM60-201ENST00000341062 PLBD2Q8NHP8 589 aa16.29■□□□□ 0.2
TRIM60-201ENST00000341062 TFCP2L1Q9NZI6 479 aa16.29■□□□□ 0.2
TRIM60-201ENST00000341062 ANKRD36CQ5JPF3 1778 aa16.28■□□□□ 0.2
TRIM60-201ENST00000341062 GRM8O00222 908 aa16.28■□□□□ 0.2
TRIM60-201ENST00000341062 GPTP24298 496 aa16.28■□□□□ 0.2
TRIM60-201ENST00000341062 SSFA2P28290 1259 aa16.28■□□□□ 0.2
TRIM60-201ENST00000341062 SLC15A2Q16348 729 aa16.27■□□□□ 0.2
TRIM60-201ENST00000341062 CCDC125Q86Z20 511 aa16.27■□□□□ 0.2
TRIM60-201ENST00000341062 ANO2Q9NQ90 1003 aa16.27■□□□□ 0.2
TRIM60-201ENST00000341062 GOLGA6L3A6NEY3 463 aa16.27■□□□□ 0.19
TRIM60-201ENST00000341062 CNTROBQ8N137 903 aa16.27■□□□□ 0.19
TRIM60-201ENST00000341062 SYNE4Q8N205 404 aa16.27■□□□□ 0.19
TRIM60-201ENST00000341062 METTL22Q9BUU2 404 aaPredicted RBP16.27■□□□□ 0.19
TRIM60-201ENST00000341062 UBN2Q6ZU65 1347 aa16.26■□□□□ 0.19
TRIM60-201ENST00000341062 GOLGA6L22H0YM25 854 aa16.26■□□□□ 0.19
TRIM60-201ENST00000341062 GLRX3O76003 335 aaKnown RBP16.26■□□□□ 0.19
TRIM60-201ENST00000341062 TRAPPC3LQ5T215 181 aa16.26■□□□□ 0.19
TRIM60-201ENST00000341062 KIF6Q6ZMV9 814 aa16.26■□□□□ 0.19
TRIM60-201ENST00000341062 BAG4O95429 457 aaKnown RBP16.25■□□□□ 0.19
TRIM60-201ENST00000341062 NEK4P51957 841 aa16.25■□□□□ 0.19
TRIM60-201ENST00000341062 CLASRPQ8N2M8 674 aaKnown RBP16.25■□□□□ 0.19
TRIM60-201ENST00000341062 SGSM2O43147 1006 aa16.25■□□□□ 0.19
TRIM60-201ENST00000341062 HSPA4P34932 840 aa16.25■□□□□ 0.19
TRIM60-201ENST00000341062 TBC1D9BQ66K14 1250 aa16.25■□□□□ 0.19
TRIM60-201ENST00000341062 GIGYF2Q6Y7W6 1299 aaKnown RBP16.25■□□□□ 0.19
TRIM60-201ENST00000341062 KAZALD1Q96I82 304 aa16.25■□□□□ 0.19
TRIM60-201ENST00000341062 NARFQ9UHQ1 456 aa16.25■□□□□ 0.19
TRIM60-201ENST00000341062 PALD1Q9ULE6 856 aa16.25■□□□□ 0.19
TRIM60-201ENST00000341062 RAD50Q92878 1312 aa16.24■□□□□ 0.19
TRIM60-201ENST00000341062 FAM177BA6PVY3 158 aa16.24■□□□□ 0.19
TRIM60-201ENST00000341062 NEURL1BA8MQ27 555 aa16.24■□□□□ 0.19
TRIM60-201ENST00000341062 OS9Q13438 667 aaPredicted RBP16.24■□□□□ 0.19
TRIM60-201ENST00000341062 CUL4AQ13619 759 aa16.24■□□□□ 0.19
TRIM60-201ENST00000341062 BICDL1Q6ZP65 573 aa16.24■□□□□ 0.19
TRIM60-201ENST00000341062 GYS1P13807 737 aa16.23■□□□□ 0.19
TRIM60-201ENST00000341062 RFC4P35249 363 aa16.23■□□□□ 0.19
TRIM60-201ENST00000341062 MSL1Q68DK7 614 aa16.23■□□□□ 0.19
TRIM60-201ENST00000341062 SUCLG2Q96I99 432 aa16.23■□□□□ 0.19
TRIM60-201ENST00000341062 TMX3Q96JJ7 454 aa16.23■□□□□ 0.19
TRIM60-201ENST00000341062 ISCA1Q9BUE6 129 aa16.23■□□□□ 0.19
TRIM60-201ENST00000341062 GZF1Q9H116 711 aaPredicted RBP16.23■□□□□ 0.19
TRIM60-201ENST00000341062 ECHDC1Q9NTX5 307 aa16.23■□□□□ 0.19
TRIM60-201ENST00000341062 NEXNQ0ZGT2 675 aa16.22■□□□□ 0.19
TRIM60-201ENST00000341062 TCIRG1Q13488 830 aa16.22■□□□□ 0.19
TRIM60-201ENST00000341062 INTS4Q96HW7 963 aaKnown RBP16.22■□□□□ 0.19
TRIM60-201ENST00000341062 GPATCH3Q96I76 525 aa16.22■□□□□ 0.19
TRIM60-201ENST00000341062 IL25Q9H293 177 aa16.22■□□□□ 0.19
TRIM60-201ENST00000341062 QSER1Q2KHR3 1735 aa16.22■□□□□ 0.19
TRIM60-201ENST00000341062 PSDA5PKW4 1024 aaPredicted RBP16.22■□□□□ 0.19
TRIM60-201ENST00000341062 ZNF34Q8IZ26 560 aa16.22■□□□□ 0.19
TRIM60-201ENST00000341062 CCDC24Q8N4L8 307 aa16.22■□□□□ 0.19
TRIM60-201ENST00000341062 ZGPATQ8N5A5 531 aaKnown RBP16.22■□□□□ 0.19
TRIM60-201ENST00000341062 STK32BQ9NY57 414 aa16.22■□□□□ 0.19
TRIM60-201ENST00000341062 ERVV-1B6SEH8 477 aa16.21■□□□□ 0.19
TRIM60-201ENST00000341062 XRCC6P12956 609 aaKnown RBP eCLIP16.21■□□□□ 0.19
TRIM60-201ENST00000341062 MRE11P49959 708 aa16.21■□□□□ 0.19
TRIM60-201ENST00000341062 BICC1Q9H694 974 aaKnown RBP16.21■□□□□ 0.19
TRIM60-201ENST00000341062 ZPR1O75312 459 aa16.2■□□□□ 0.18
TRIM60-201ENST00000341062 GCKRQ14397 625 aa16.2■□□□□ 0.18
TRIM60-201ENST00000341062 R3HDM1Q15032 1099 aaKnown RBP16.2■□□□□ 0.18
TRIM60-201ENST00000341062 KLHL40Q2TBA0 621 aa16.2■□□□□ 0.18
TRIM60-201ENST00000341062 SUSD4Q5VX71 490 aa16.2■□□□□ 0.18
TRIM60-201ENST00000341062 NLRP10Q86W26 655 aa16.2■□□□□ 0.18
TRIM60-201ENST00000341062 LSG1Q9H089 658 aaKnown RBP16.2■□□□□ 0.18
TRIM60-201ENST00000341062 IFIT2P09913 472 aaKnown RBP16.2■□□□□ 0.18
TRIM60-201ENST00000341062 NIP7Q9Y221 180 aaKnown RBP eCLIP16.2■□□□□ 0.18
TRIM60-201ENST00000341062 A0A087WZG4 1122 aa16.19■□□□□ 0.18
TRIM60-201ENST00000341062 ADRA2BP18089 450 aa16.19■□□□□ 0.18
TRIM60-201ENST00000341062 NFIXQ14938 502 aa16.19■□□□□ 0.18
TRIM60-201ENST00000341062 RUFY2Q8WXA3 655 aa16.19■□□□□ 0.18
TRIM60-201ENST00000341062 PA2G4Q9UQ80 394 aaKnown RBP16.19■□□□□ 0.18
TRIM60-201ENST00000341062 ZDHHC9Q9Y397 364 aa16.19■□□□□ 0.18
TRIM60-201ENST00000341062 COL24A1Q17RW2 1714 aa16.19■□□□□ 0.18
TRIM60-201ENST00000341062 CASZ1Q86V15 1759 aa16.19■□□□□ 0.18
TRIM60-201ENST00000341062 SASH1O94885 1247 aa16.18■□□□□ 0.18
TRIM60-201ENST00000341062 MAP4K4O95819 1239 aaPredicted RBP16.18■□□□□ 0.18
TRIM60-201ENST00000341062 CASP7P55210 303 aa16.18■□□□□ 0.18
TRIM60-201ENST00000341062 DDR1Q08345 913 aa16.18■□□□□ 0.18
TRIM60-201ENST00000341062 G3BP1Q13283 466 aaKnown RBP eCLIP16.18■□□□□ 0.18
TRIM60-201ENST00000341062 PKP1Q13835 747 aa16.18■□□□□ 0.18
TRIM60-201ENST00000341062 EPHA10Q5JZY3 1008 aa16.18■□□□□ 0.18
TRIM60-201ENST00000341062 FAM89AQ96GI7 184 aa16.18■□□□□ 0.18
TRIM60-201ENST00000341062 EVI5LQ96CN4 794 aa16.18■□□□□ 0.18
TRIM60-201ENST00000341062 KIAA1211Q6ZU35 1233 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms