RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 IFIT5Q13325 482 aaKnown RBP18.36■□□□□ 0.53
CSRP1-201ENST00000340006 RABL6Q3YEC7 729 aaPredicted RBP18.36■□□□□ 0.53
CSRP1-201ENST00000340006 BRIP1Q9BX63 1249 aa18.35■□□□□ 0.53
CSRP1-201ENST00000340006 ABCC12Q96J65 1359 aa18.35■□□□□ 0.53
CSRP1-201ENST00000340006 TAF7LQ5H9L4 462 aa18.35■□□□□ 0.53
CSRP1-201ENST00000340006 GREM2Q9H772 168 aa18.35■□□□□ 0.53
CSRP1-201ENST00000340006 DDX60Q8IY21 1712 aaKnown RBP18.35■□□□□ 0.53
CSRP1-201ENST00000340006 CASZ1Q86V15 1759 aa18.34■□□□□ 0.53
CSRP1-201ENST00000340006 PDE6BP35913 854 aa18.34■□□□□ 0.53
CSRP1-201ENST00000340006 MTX1Q13505 466 aa18.34■□□□□ 0.53
CSRP1-201ENST00000340006 HDAC1Q13547 482 aaPredicted RBP18.34■□□□□ 0.53
CSRP1-201ENST00000340006 SSH3Q8TE77 659 aa18.34■□□□□ 0.53
CSRP1-201ENST00000340006 ANKRD18BA2A2Z9 1011 aa18.33■□□□□ 0.53
CSRP1-201ENST00000340006 ITGA6P23229 1130 aa18.33■□□□□ 0.53
CSRP1-201ENST00000340006 SF3B3Q15393 1217 aaKnown RBP18.33■□□□□ 0.53
CSRP1-201ENST00000340006 FAM161AQ3B820 660 aa18.33■□□□□ 0.53
CSRP1-201ENST00000340006 C3orf67Q6ZVT6 689 aa18.33■□□□□ 0.53
CSRP1-201ENST00000340006 SURF6O75683 361 aaKnown RBP18.33■□□□□ 0.52
CSRP1-201ENST00000340006 RPGRQ92834 1020 aaKnown RBP18.33■□□□□ 0.52
CSRP1-201ENST00000340006 SPON1Q9HCB6 807 aa18.33■□□□□ 0.52
CSRP1-201ENST00000340006 PPP1R1BQ9UD71 204 aaPredicted RBP18.33■□□□□ 0.52
CSRP1-201ENST00000340006 DDX46Q7L014 1031 aaKnown RBP18.32■□□□□ 0.52
CSRP1-201ENST00000340006 KLHDC4Q8TBB5 520 aa18.32■□□□□ 0.52
CSRP1-201ENST00000340006 OS9Q13438 667 aaPredicted RBP18.31■□□□□ 0.52
CSRP1-201ENST00000340006 POLA2Q14181 598 aa18.31■□□□□ 0.52
CSRP1-201ENST00000340006 ZNF594Q96JF6 807 aaPredicted RBP18.31■□□□□ 0.52
CSRP1-201ENST00000340006 BCL11AQ9H165 835 aa18.31■□□□□ 0.52
CSRP1-201ENST00000340006 SIL1Q9H173 461 aa18.31■□□□□ 0.52
CSRP1-201ENST00000340006 SEC31BQ9NQW1 1179 aa18.31■□□□□ 0.52
CSRP1-201ENST00000340006 PA2G4Q9UQ80 394 aaKnown RBP18.31■□□□□ 0.52
CSRP1-201ENST00000340006 APBB1O00213 710 aa18.31■□□□□ 0.52
CSRP1-201ENST00000340006 KLHL34Q8N239 644 aa18.31■□□□□ 0.52
CSRP1-201ENST00000340006 G3BP1Q13283 466 aaKnown RBP eCLIP18.3■□□□□ 0.52
CSRP1-201ENST00000340006 NRXN2Q9P2S2 1712 aa18.3■□□□□ 0.52
CSRP1-201ENST00000340006 LAMB2P55268 1798 aa18.3■□□□□ 0.52
CSRP1-201ENST00000340006 H0YIN7 160 aa18.3■□□□□ 0.52
CSRP1-201ENST00000340006 RBM17Q96I25 401 aaKnown RBP18.3■□□□□ 0.52
CSRP1-201ENST00000340006 DCTPP1Q9H773 170 aa18.3■□□□□ 0.52
CSRP1-201ENST00000340006 EXOC6BQ9Y2D4 811 aa18.3■□□□□ 0.52
CSRP1-201ENST00000340006 PTPN12Q05209 780 aaKnown RBP18.29■□□□□ 0.52
CSRP1-201ENST00000340006 LDHAL6AQ6ZMR3 332 aa18.29■□□□□ 0.52
CSRP1-201ENST00000340006 C2CD5Q86YS7 1000 aa18.29■□□□□ 0.52
CSRP1-201ENST00000340006 CDC5LQ99459 802 aaKnown RBP18.29■□□□□ 0.52
CSRP1-201ENST00000340006 MPHOSPH8Q99549 860 aa18.29■□□□□ 0.52
CSRP1-201ENST00000340006 ZBTB47Q9UFB7 747 aaPredicted RBP18.29■□□□□ 0.52
CSRP1-201ENST00000340006 IGHMBP2P38935 993 aaKnown RBP18.28■□□□□ 0.52
CSRP1-201ENST00000340006 RFX5P48382 616 aaPredicted RBP18.28■□□□□ 0.52
CSRP1-201ENST00000340006 ZNF622Q969S3 477 aaKnown RBP eCLIP18.28■□□□□ 0.52
CSRP1-201ENST00000340006 GCC1Q96CN9 775 aa18.28■□□□□ 0.52
CSRP1-201ENST00000340006 COPRSQ9NQ92 184 aa18.28■□□□□ 0.52
CSRP1-201ENST00000340006 TAF1P21675 1872 aa18.28■□□□□ 0.52
CSRP1-201ENST00000340006 PTGER2P43116 358 aa18.28■□□□□ 0.52
CSRP1-201ENST00000340006 HSP90AB4PQ58FF6 505 aa18.28■□□□□ 0.52
CSRP1-201ENST00000340006 CENPQQ7L2Z9 268 aaPredicted RBP18.28■□□□□ 0.52
CSRP1-201ENST00000340006 ANKRD18AQ8IVF6 992 aa18.28■□□□□ 0.52
CSRP1-201ENST00000340006 CNNM1Q9NRU3 951 aa18.28■□□□□ 0.52
CSRP1-201ENST00000340006 KDM2BQ8NHM5 1336 aa18.28■□□□□ 0.52
CSRP1-201ENST00000340006 KLRG2A4D1S0 409 aaPredicted RBP18.27■□□□□ 0.52
CSRP1-201ENST00000340006 RPS8P62241 208 aaKnown RBP18.27■□□□□ 0.52
CSRP1-201ENST00000340006 CRY2Q49AN0 593 aa18.27■□□□□ 0.52
CSRP1-201ENST00000340006 ANKRD31Q8N7Z5 1873 aa18.27■□□□□ 0.51
CSRP1-201ENST00000340006 SRGNP10124 158 aa18.26■□□□□ 0.51
CSRP1-201ENST00000340006 ANKRD45Q5TZF3 282 aa18.26■□□□□ 0.51
CSRP1-201ENST00000340006 SGIP1Q9BQI5 828 aa18.26■□□□□ 0.51
CSRP1-201ENST00000340006 NPR1P16066 1061 aa18.26■□□□□ 0.51
CSRP1-201ENST00000340006 ALDH1B1P30837 517 aa18.26■□□□□ 0.51
CSRP1-201ENST00000340006 MASTLQ96GX5 879 aa18.26■□□□□ 0.51
CSRP1-201ENST00000340006 PDZRN3Q9UPQ7 1066 aa18.26■□□□□ 0.51
CSRP1-201ENST00000340006 TNRC6CQ9HCJ0 1690 aaKnown RBP18.26■□□□□ 0.51
CSRP1-201ENST00000340006 RIC1Q4ADV7 1423 aa18.25■□□□□ 0.51
CSRP1-201ENST00000340006 CHRNA5P30532 468 aa18.25■□□□□ 0.51
CSRP1-201ENST00000340006 CELF1Q92879 486 aaKnown RBP18.25■□□□□ 0.51
CSRP1-201ENST00000340006 PUS3Q9BZE2 481 aaKnown RBP18.25■□□□□ 0.51
CSRP1-201ENST00000340006 NOP58Q9Y2X3 529 aaKnown RBP18.25■□□□□ 0.51
CSRP1-201ENST00000340006 RTL9Q8NET4 1388 aa18.25■□□□□ 0.51
CSRP1-201ENST00000340006 EYA2O00167 538 aa18.24■□□□□ 0.51
CSRP1-201ENST00000340006 RAB11FIP3O75154 756 aa18.24■□□□□ 0.51
CSRP1-201ENST00000340006 LRRC24Q50LG9 513 aa18.24■□□□□ 0.51
CSRP1-201ENST00000340006 A0A0G2JLW4 131 aa18.24■□□□□ 0.51
CSRP1-201ENST00000340006 HOXA10P31260 410 aaPredicted RBP18.24■□□□□ 0.51
CSRP1-201ENST00000340006 GRAPQ13588 217 aa18.24■□□□□ 0.51
CSRP1-201ENST00000340006 ERC1Q8IUD2 1116 aa18.24■□□□□ 0.51
CSRP1-201ENST00000340006 SMC5Q8IY18 1101 aa18.24■□□□□ 0.51
CSRP1-201ENST00000340006 GRAPLQ8TC17 118 aaPredicted RBP18.24■□□□□ 0.51
CSRP1-201ENST00000340006 CRAMP1Q96RY5 1269 aa18.24■□□□□ 0.51
CSRP1-201ENST00000340006 BBOX1O75936 387 aa18.22■□□□□ 0.51
CSRP1-201ENST00000340006 IL15P40933 162 aaPredicted RBP18.22■□□□□ 0.51
CSRP1-201ENST00000340006 TGFB2P61812 414 aa18.22■□□□□ 0.51
CSRP1-201ENST00000340006 LRRCC1Q9C099 1032 aa18.22■□□□□ 0.51
CSRP1-201ENST00000340006 BSDC1Q9NW68 430 aaPredicted RBP18.22■□□□□ 0.51
CSRP1-201ENST00000340006 SPEF2Q9C093 1822 aa18.22■□□□□ 0.51
CSRP1-201ENST00000340006 CIAO1O76071 339 aa18.22■□□□□ 0.51
CSRP1-201ENST00000340006 RHPN1Q8TCX5 695 aa18.22■□□□□ 0.51
CSRP1-201ENST00000340006 TMX4Q9H1E5 349 aaPredicted RBP18.22■□□□□ 0.51
CSRP1-201ENST00000340006 CEP126Q9P2H0 1117 aa18.22■□□□□ 0.51
CSRP1-201ENST00000340006 FBXO3Q9UK99 471 aa18.22■□□□□ 0.51
CSRP1-201ENST00000340006 CD2APQ9Y5K6 639 aa18.22■□□□□ 0.51
CSRP1-201ENST00000340006 SMARCA5O60264 1052 aaPredicted RBP18.21■□□□□ 0.51
CSRP1-201ENST00000340006 DPEP1P16444 411 aa18.21■□□□□ 0.51
CSRP1-201ENST00000340006 METTL24Q5JXM2 366 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms