RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 SEC62Q99442 399 aaKnown RBP8.98□□□□□ -0.97
SRFBP1-201ENST00000339397 TRMT112Q9UI30 125 aaKnown RBP8.98□□□□□ -0.97
SRFBP1-201ENST00000339397 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.98□□□□□ -0.97
SRFBP1-201ENST00000339397 TJP1Q07157 1748 aa8.98□□□□□ -0.97
SRFBP1-201ENST00000339397 DOT1LQ8TEK3 1739 aa8.98□□□□□ -0.97
SRFBP1-201ENST00000339397 COL15A1P39059 1388 aa8.98□□□□□ -0.97
SRFBP1-201ENST00000339397 HCLS1P14317 486 aaPredicted RBP8.98□□□□□ -0.97
SRFBP1-201ENST00000339397 DEKP35659 375 aaKnown RBP8.98□□□□□ -0.97
SRFBP1-201ENST00000339397 ZNF589Q86UQ0 364 aaPredicted RBP8.98□□□□□ -0.97
SRFBP1-201ENST00000339397 EVI5LQ96CN4 794 aa8.98□□□□□ -0.97
SRFBP1-201ENST00000339397 GPATCH3Q96I76 525 aa8.98□□□□□ -0.97
SRFBP1-201ENST00000339397 DIAPH3Q9NSV4 1193 aa8.98□□□□□ -0.97
SRFBP1-201ENST00000339397 TAF6LQ9Y6J9 622 aa8.98□□□□□ -0.97
SRFBP1-201ENST00000339397 PALLDQ8WX93 1383 aa8.98□□□□□ -0.97
SRFBP1-201ENST00000339397 SNAP23O00161 211 aa8.98□□□□□ -0.97
SRFBP1-201ENST00000339397 EYA2O00167 538 aa8.98□□□□□ -0.97
SRFBP1-201ENST00000339397 PCCAP05165 728 aaPredicted RBP8.98□□□□□ -0.97
SRFBP1-201ENST00000339397 ADORA1P30542 326 aa8.98□□□□□ -0.97
SRFBP1-201ENST00000339397 IL6STP40189 918 aaPredicted RBP8.98□□□□□ -0.97
SRFBP1-201ENST00000339397 VPS72Q15906 364 aa8.98□□□□□ -0.97
SRFBP1-201ENST00000339397 CCDC57Q2TAC2 916 aa8.98□□□□□ -0.97
SRFBP1-201ENST00000339397 DDX46Q7L014 1031 aaKnown RBP8.98□□□□□ -0.97
SRFBP1-201ENST00000339397 FNBP4Q8N3X1 1017 aaPredicted RBP8.98□□□□□ -0.97
SRFBP1-201ENST00000339397 TTLL11Q8NHH1 800 aa8.98□□□□□ -0.97
SRFBP1-201ENST00000339397 CCDC87Q9NVE4 849 aa8.98□□□□□ -0.97
SRFBP1-201ENST00000339397 MYH14Q7Z406 1995 aaKnown RBP8.98□□□□□ -0.97
SRFBP1-201ENST00000339397 LRP6O75581 1613 aa8.97□□□□□ -0.97
SRFBP1-201ENST00000339397 IRS4O14654 1257 aaPredicted RBP8.97□□□□□ -0.97
SRFBP1-201ENST00000339397 HSPA4P34932 840 aa8.97□□□□□ -0.97
SRFBP1-201ENST00000339397 ADCK5Q3MIX3 580 aa8.97□□□□□ -0.97
SRFBP1-201ENST00000339397 SUSD4Q5VX71 490 aa8.97□□□□□ -0.97
SRFBP1-201ENST00000339397 FSD1Q9BTV5 496 aa8.97□□□□□ -0.97
SRFBP1-201ENST00000339397 CHMP5Q9NZZ3 219 aa8.97□□□□□ -0.97
SRFBP1-201ENST00000339397 JCADQ9P266 1359 aa8.97□□□□□ -0.97
SRFBP1-201ENST00000339397 A0A1B0GUL7 405 aa8.97□□□□□ -0.97
SRFBP1-201ENST00000339397 CSF1RP07333 972 aa8.97□□□□□ -0.97
SRFBP1-201ENST00000339397 CCDC129Q6ZRS4 1044 aa8.97□□□□□ -0.97
SRFBP1-201ENST00000339397 AMIGO3Q86WK7 504 aa8.97□□□□□ -0.97
SRFBP1-201ENST00000339397 LINC00116Q8NCU8 138 aa8.97□□□□□ -0.97
SRFBP1-201ENST00000339397 CHAMP1Q96JM3 812 aa8.97□□□□□ -0.97
SRFBP1-201ENST00000339397 SNX14Q9Y5W7 946 aa8.97□□□□□ -0.97
SRFBP1-201ENST00000339397 RAD50Q92878 1312 aa8.97□□□□□ -0.97
SRFBP1-201ENST00000339397 ATP5JP18859 108 aa8.96□□□□□ -0.97
SRFBP1-201ENST00000339397 ITGA6P23229 1130 aa8.96□□□□□ -0.97
SRFBP1-201ENST00000339397 PI16Q6UXB8 463 aa8.96□□□□□ -0.97
SRFBP1-201ENST00000339397 SNRKQ9NRH2 765 aa8.96□□□□□ -0.97
SRFBP1-201ENST00000339397 AK9Q5TCS8 1911 aa8.96□□□□□ -0.97
SRFBP1-201ENST00000339397 PRPF40BQ6NWY9 871 aaKnown RBP8.96□□□□□ -0.98
SRFBP1-201ENST00000339397 ZNF34Q8IZ26 560 aa8.96□□□□□ -0.98
SRFBP1-201ENST00000339397 HELBQ8NG08 1087 aaPredicted RBP8.96□□□□□ -0.98
SRFBP1-201ENST00000339397 TNPO1Q92973 898 aaKnown RBP8.96□□□□□ -0.98
SRFBP1-201ENST00000339397 CAMTA2O94983 1202 aa8.95□□□□□ -0.98
SRFBP1-201ENST00000339397 SSFA2P28290 1259 aa8.95□□□□□ -0.98
SRFBP1-201ENST00000339397 IL15P40933 162 aaPredicted RBP8.95□□□□□ -0.98
SRFBP1-201ENST00000339397 IFIT5Q13325 482 aaKnown RBP8.95□□□□□ -0.98
SRFBP1-201ENST00000339397 SCARF1Q14162 830 aa8.95□□□□□ -0.98
SRFBP1-201ENST00000339397 TMX3Q96JJ7 454 aa8.95□□□□□ -0.98
SRFBP1-201ENST00000339397 GOLIM4O00461 696 aa8.95□□□□□ -0.98
SRFBP1-201ENST00000339397 ST18O60284 1047 aa8.95□□□□□ -0.98
SRFBP1-201ENST00000339397 LDHAL6AQ6ZMR3 332 aa8.95□□□□□ -0.98
SRFBP1-201ENST00000339397 KIAA1211Q6ZU35 1233 aa8.95□□□□□ -0.98
SRFBP1-201ENST00000339397 SEC31BQ9NQW1 1179 aa8.95□□□□□ -0.98
SRFBP1-201ENST00000339397 WNK3Q9BYP7 1800 aa8.95□□□□□ -0.98
SRFBP1-201ENST00000339397 WTIPA6NIX2 430 aaPredicted RBP8.94□□□□□ -0.98
SRFBP1-201ENST00000339397 ERVV-1B6SEH8 477 aa8.94□□□□□ -0.98
SRFBP1-201ENST00000339397 CTSWP56202 376 aa8.94□□□□□ -0.98
SRFBP1-201ENST00000339397 TAF7LQ5H9L4 462 aa8.94□□□□□ -0.98
SRFBP1-201ENST00000339397 HAUS7Q99871 368 aa8.94□□□□□ -0.98
SRFBP1-201ENST00000339397 CEP126Q9P2H0 1117 aa8.94□□□□□ -0.98
SRFBP1-201ENST00000339397 RIPOR2Q9Y4F9 1068 aa8.94□□□□□ -0.98
SRFBP1-201ENST00000339397 FOXD4L5Q5VV16 416 aaPredicted RBP8.94□□□□□ -0.98
SRFBP1-201ENST00000339397 BICDL1Q6ZP65 573 aa8.94□□□□□ -0.98
SRFBP1-201ENST00000339397 CCDC24Q8N4L8 307 aa8.94□□□□□ -0.98
SRFBP1-201ENST00000339397 FOXD4L4Q8WXT5 416 aaPredicted RBP8.94□□□□□ -0.98
SRFBP1-201ENST00000339397 TCEANC2Q96MN5 208 aa8.94□□□□□ -0.98
SRFBP1-201ENST00000339397 PLA2G12BQ9BX93 195 aa8.94□□□□□ -0.98
SRFBP1-201ENST00000339397 NIP7Q9Y221 180 aaKnown RBP eCLIP8.94□□□□□ -0.98
SRFBP1-201ENST00000339397 A0A0G2JLW4 131 aa8.94□□□□□ -0.98
SRFBP1-201ENST00000339397 MCCP23508 829 aa8.94□□□□□ -0.98
SRFBP1-201ENST00000339397 MCM4P33991 863 aa8.94□□□□□ -0.98
SRFBP1-201ENST00000339397 FKBP4Q02790 459 aaKnown RBP eCLIP8.94□□□□□ -0.98
SRFBP1-201ENST00000339397 NECTIN1Q15223 517 aa8.94□□□□□ -0.98
SRFBP1-201ENST00000339397 KLHL34Q8N239 644 aa8.94□□□□□ -0.98
SRFBP1-201ENST00000339397 XAGE2Q96GT9 111 aa8.94□□□□□ -0.98
SRFBP1-201ENST00000339397 RBM8AQ9Y5S9 174 aaKnown RBP8.94□□□□□ -0.98
SRFBP1-201ENST00000339397 NUP98P52948 1817 aa8.94□□□□□ -0.98
SRFBP1-201ENST00000339397 CCDC171Q6TFL3 1326 aa8.93□□□□□ -0.98
SRFBP1-201ENST00000339397 MEX3CQ5U5Q3 659 aaKnown RBP8.93□□□□□ -0.98
SRFBP1-201ENST00000339397 UTRNP46939 3433 aa8.93□□□□□ -0.98
SRFBP1-201ENST00000339397 AFF2P51816 1311 aa8.93□□□□□ -0.98
SRFBP1-201ENST00000339397 EIF5BO60841 1220 aaKnown RBP8.93□□□□□ -0.98
SRFBP1-201ENST00000339397 TAF5LO75529 589 aa8.93□□□□□ -0.98
SRFBP1-201ENST00000339397 CASTP20810 708 aaKnown RBP8.93□□□□□ -0.98
SRFBP1-201ENST00000339397 ANAPC15P60006 121 aa8.93□□□□□ -0.98
SRFBP1-201ENST00000339397 RAB3GAP1Q15042 981 aa8.93□□□□□ -0.98
SRFBP1-201ENST00000339397 HSP90AB3PQ58FF7 597 aa8.93□□□□□ -0.98
SRFBP1-201ENST00000339397 VPS53Q5VIR6 699 aa8.93□□□□□ -0.98
SRFBP1-201ENST00000339397 C3orf67Q6ZVT6 689 aa8.93□□□□□ -0.98
SRFBP1-201ENST00000339397 RUFY2Q8WXA3 655 aa8.93□□□□□ -0.98
SRFBP1-201ENST00000339397 MAP4K1Q92918 833 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 423.9 ms