RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 LARGE1O95461 756 aa15.67■□□□□ 0.1
CDK5RAP1-201ENST00000339269 TNNI3KQ59H18 835 aa15.67■□□□□ 0.1
CDK5RAP1-201ENST00000339269 FPGT-TNNI3KV9GXZ4 949 aa15.67■□□□□ 0.1
CDK5RAP1-201ENST00000339269 ST3GAL1Q11201 340 aa15.66■□□□□ 0.1
CDK5RAP1-201ENST00000339269 RUFY2Q8WXA3 655 aa15.66■□□□□ 0.1
CDK5RAP1-201ENST00000339269 MAP4K1Q92918 833 aa15.66■□□□□ 0.1
CDK5RAP1-201ENST00000339269 DDX49Q9Y6V7 483 aaKnown RBP15.66■□□□□ 0.1
CDK5RAP1-201ENST00000339269 THSD7AQ9UPZ6 1657 aa15.66■□□□□ 0.1
CDK5RAP1-201ENST00000339269 EP400Q96L91 3159 aa15.66■□□□□ 0.1
CDK5RAP1-201ENST00000339269 FOXD4L5Q5VV16 416 aaPredicted RBP15.65■□□□□ 0.1
CDK5RAP1-201ENST00000339269 PRPF40BQ6NWY9 871 aaKnown RBP15.65■□□□□ 0.1
CDK5RAP1-201ENST00000339269 KIAA1211Q6ZU35 1233 aa15.65■□□□□ 0.1
CDK5RAP1-201ENST00000339269 FOXD4L4Q8WXT5 416 aaPredicted RBP15.65■□□□□ 0.1
CDK5RAP1-201ENST00000339269 LARP6Q9BRS8 491 aaKnown RBP15.65■□□□□ 0.1
CDK5RAP1-201ENST00000339269 ZSWIM6Q9HCJ5 1215 aa15.65■□□□□ 0.1
CDK5RAP1-201ENST00000339269 NSFL1CQ9UNZ2 370 aaKnown RBP15.65■□□□□ 0.1
CDK5RAP1-201ENST00000339269 RBM8AQ9Y5S9 174 aaKnown RBP15.65■□□□□ 0.1
CDK5RAP1-201ENST00000339269 TAF6LQ9Y6J9 622 aa15.65■□□□□ 0.1
CDK5RAP1-201ENST00000339269 ATP5JP18859 108 aa15.65■□□□□ 0.1
CDK5RAP1-201ENST00000339269 LMBR1LQ6UX01 489 aa15.65■□□□□ 0.1
CDK5RAP1-201ENST00000339269 ATG9AQ7Z3C6 839 aa15.65■□□□□ 0.1
CDK5RAP1-201ENST00000339269 ZNF589Q86UQ0 364 aaPredicted RBP15.65■□□□□ 0.1
CDK5RAP1-201ENST00000339269 SEPT12Q8IYM1 358 aa15.65■□□□□ 0.1
CDK5RAP1-201ENST00000339269 DDX54Q8TDD1 881 aaKnown RBP15.65■□□□□ 0.1
CDK5RAP1-201ENST00000339269 TM6SF1Q9BZW5 370 aa15.65■□□□□ 0.1
CDK5RAP1-201ENST00000339269 DISP2A7MBM2 1401 aa15.64■□□□□ 0.09
CDK5RAP1-201ENST00000339269 PRPF40AO75400 957 aaKnown RBP15.64■□□□□ 0.09
CDK5RAP1-201ENST00000339269 CHGBP05060 677 aa15.64■□□□□ 0.09
CDK5RAP1-201ENST00000339269 ONECUT3O60422 494 aaPredicted RBP15.63■□□□□ 0.09
CDK5RAP1-201ENST00000339269 CASTP20810 708 aaKnown RBP15.63■□□□□ 0.09
CDK5RAP1-201ENST00000339269 ZNF445P59923 1031 aa15.63■□□□□ 0.09
CDK5RAP1-201ENST00000339269 CREB3L3Q68CJ9 461 aa15.63■□□□□ 0.09
CDK5RAP1-201ENST00000339269 DBNDD2Q9BQY9 259 aa15.63■□□□□ 0.09
CDK5RAP1-201ENST00000339269 THRAP3Q9Y2W1 955 aaKnown RBP15.63■□□□□ 0.09
CDK5RAP1-201ENST00000339269 NDUFB9Q9Y6M9 179 aa15.63■□□□□ 0.09
CDK5RAP1-201ENST00000339269 JAKMIP1Q96N16 626 aaKnown RBP15.63■□□□□ 0.09
CDK5RAP1-201ENST00000339269 LIMCH1Q9UPQ0 1083 aa15.63■□□□□ 0.09
CDK5RAP1-201ENST00000339269 HIP1O00291 1037 aa15.62■□□□□ 0.09
CDK5RAP1-201ENST00000339269 SLC27A2O14975 620 aa15.62■□□□□ 0.09
CDK5RAP1-201ENST00000339269 BARGINQ6ZT62 677 aa15.62■□□□□ 0.09
CDK5RAP1-201ENST00000339269 FSD1Q9BTV5 496 aa15.62■□□□□ 0.09
CDK5RAP1-201ENST00000339269 ZBTB3Q9H5J0 574 aa15.62■□□□□ 0.09
CDK5RAP1-201ENST00000339269 CWC25Q9NXE8 425 aaPredicted RBP15.62■□□□□ 0.09
CDK5RAP1-201ENST00000339269 RBM27Q9P2N5 1060 aaKnown RBP15.62■□□□□ 0.09
CDK5RAP1-201ENST00000339269 ZNF609O15014 1411 aa15.62■□□□□ 0.09
CDK5RAP1-201ENST00000339269 ZSCAN23Q3MJ62 389 aa15.61■□□□□ 0.09
CDK5RAP1-201ENST00000339269 VPS53Q5VIR6 699 aa15.61■□□□□ 0.09
CDK5RAP1-201ENST00000339269 CAVIN1Q6NZI2 390 aaKnown RBP15.61■□□□□ 0.09
CDK5RAP1-201ENST00000339269 ISCA1Q9BUE6 129 aa15.61■□□□□ 0.09
CDK5RAP1-201ENST00000339269 TAF5LO75529 589 aa15.61■□□□□ 0.09
CDK5RAP1-201ENST00000339269 RFX7Q2KHR2 1363 aa15.61■□□□□ 0.09
CDK5RAP1-201ENST00000339269 FAM43AQ8N2R8 423 aa15.61■□□□□ 0.09
CDK5RAP1-201ENST00000339269 CCDC191Q8NCU4 936 aa15.6■□□□□ 0.09
CDK5RAP1-201ENST00000339269 PIGBQ92521 554 aa15.6■□□□□ 0.09
CDK5RAP1-201ENST00000339269 HAUS7Q99871 368 aa15.6■□□□□ 0.09
CDK5RAP1-201ENST00000339269 RRAGDQ9NQL2 400 aaPredicted RBP15.6■□□□□ 0.09
CDK5RAP1-201ENST00000339269 TMEM63CQ9P1W3 806 aa15.6■□□□□ 0.09
CDK5RAP1-201ENST00000339269 ASAP1Q9ULH1 1129 aa15.6■□□□□ 0.09
CDK5RAP1-201ENST00000339269 USPL1Q5W0Q7 1092 aa15.59■□□□□ 0.09
CDK5RAP1-201ENST00000339269 PDRG1Q9NUG6 133 aa15.59■□□□□ 0.09
CDK5RAP1-201ENST00000339269 DTNBO60941 627 aa15.59■□□□□ 0.09
CDK5RAP1-201ENST00000339269 ATG3Q9NT62 314 aa15.59■□□□□ 0.09
CDK5RAP1-201ENST00000339269 KAT6BQ8WYB5 2073 aa15.58■□□□□ 0.08
CDK5RAP1-201ENST00000339269 ME3Q16798 604 aa15.58■□□□□ 0.08
CDK5RAP1-201ENST00000339269 LRRC24Q50LG9 513 aa15.58■□□□□ 0.08
CDK5RAP1-201ENST00000339269 KRT27Q7Z3Y8 459 aa15.58■□□□□ 0.08
CDK5RAP1-201ENST00000339269 DNAJC10Q8IXB1 793 aa15.58■□□□□ 0.08
CDK5RAP1-201ENST00000339269 SLC4A9Q96Q91 983 aa15.58■□□□□ 0.08
CDK5RAP1-201ENST00000339269 TPCN1Q9ULQ1 816 aa15.58■□□□□ 0.08
CDK5RAP1-201ENST00000339269 CYP46A1Q9Y6A2 500 aa15.58■□□□□ 0.08
CDK5RAP1-201ENST00000339269 WDR33Q9C0J8 1336 aaKnown RBP15.57■□□□□ 0.08
CDK5RAP1-201ENST00000339269 TSGA10IPQ3SY00 556 aa15.57■□□□□ 0.08
CDK5RAP1-201ENST00000339269 ZNF594Q96JF6 807 aaPredicted RBP15.57■□□□□ 0.08
CDK5RAP1-201ENST00000339269 SEC62Q99442 399 aaKnown RBP15.57■□□□□ 0.08
CDK5RAP1-201ENST00000339269 GPR108Q9NPR9 543 aa15.57■□□□□ 0.08
CDK5RAP1-201ENST00000339269 TMOD3Q9NYL9 352 aa15.57■□□□□ 0.08
CDK5RAP1-201ENST00000339269 SYT1P21579 422 aa15.57■□□□□ 0.08
CDK5RAP1-201ENST00000339269 TCIRG1Q13488 830 aa15.57■□□□□ 0.08
CDK5RAP1-201ENST00000339269 CCDC83Q8IWF9 413 aa15.57■□□□□ 0.08
CDK5RAP1-201ENST00000339269 TMEM87AQ8NBN3 555 aa15.57■□□□□ 0.08
CDK5RAP1-201ENST00000339269 PUS3Q9BZE2 481 aaKnown RBP15.57■□□□□ 0.08
CDK5RAP1-201ENST00000339269 ITGB4P16144 1822 aa15.56■□□□□ 0.08
CDK5RAP1-201ENST00000339269 TRIM28Q13263 835 aaKnown RBP15.56■□□□□ 0.08
CDK5RAP1-201ENST00000339269 DDB1Q16531 1140 aa15.56■□□□□ 0.08
CDK5RAP1-201ENST00000339269 SLFNL1Q499Z3 407 aa15.56■□□□□ 0.08
CDK5RAP1-201ENST00000339269 FAM182BQ5T319 152 aa15.56■□□□□ 0.08
CDK5RAP1-201ENST00000339269 CCDC129Q6ZRS4 1044 aa15.56■□□□□ 0.08
CDK5RAP1-201ENST00000339269 CDCA7Q9BWT1 371 aaPredicted RBP15.56■□□□□ 0.08
CDK5RAP1-201ENST00000339269 PALLDQ8WX93 1383 aa15.56■□□□□ 0.08
CDK5RAP1-201ENST00000339269 EYA2O00167 538 aa15.55■□□□□ 0.08
CDK5RAP1-201ENST00000339269 GADD45BO75293 160 aaPredicted RBP15.55■□□□□ 0.08
CDK5RAP1-201ENST00000339269 ZSCAN22P10073 491 aaPredicted RBP15.55■□□□□ 0.08
CDK5RAP1-201ENST00000339269 NCLP19338 710 aaKnown RBP15.55■□□□□ 0.08
CDK5RAP1-201ENST00000339269 TOB2Q14106 344 aaPredicted RBP15.55■□□□□ 0.08
CDK5RAP1-201ENST00000339269 VSIG10Q8N0Z9 540 aa15.55■□□□□ 0.08
CDK5RAP1-201ENST00000339269 DNAJC2Q99543 621 aaKnown RBP15.55■□□□□ 0.08
CDK5RAP1-201ENST00000339269 ALDH8A1Q9H2A2 487 aaPredicted RBP15.55■□□□□ 0.08
CDK5RAP1-201ENST00000339269 GDPD2Q9HCC8 539 aa15.55■□□□□ 0.08
CDK5RAP1-201ENST00000339269 BCL9O00512 1426 aa15.55■□□□□ 0.08
CDK5RAP1-201ENST00000339269 SOCS7O14512 581 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms