RNA–Protein interactions for RNA: ENST00000338581.10

OTOF-202, Transcript of otoferlin, humanhuman

TSL 1 (best) BASIC

Gene OTOF, Length 4,954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-202ENST00000338581 CFAP58Q5T655 872 aa16.24■□□□□ 0.19
OTOF-202ENST00000338581 RRAGBQ5VZM2 374 aa16.24■□□□□ 0.19
OTOF-202ENST00000338581 EXOC1Q9NV70 894 aa16.24■□□□□ 0.19
OTOF-202ENST00000338581 RANBP6O60518 1105 aaKnown RBP16.23■□□□□ 0.19
OTOF-202ENST00000338581 CCDC50Q8IVM0 306 aa16.23■□□□□ 0.19
OTOF-202ENST00000338581 PLCD3Q8N3E9 789 aa16.23■□□□□ 0.19
OTOF-202ENST00000338581 MIPOL1Q8TD10 442 aa16.23■□□□□ 0.19
OTOF-202ENST00000338581 KIF3CO14782 793 aa16.23■□□□□ 0.19
OTOF-202ENST00000338581 TBC1D5Q92609 795 aa16.23■□□□□ 0.19
OTOF-202ENST00000338581 FERMT2Q96AC1 680 aa16.23■□□□□ 0.19
OTOF-202ENST00000338581 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.23■□□□□ 0.19
OTOF-202ENST00000338581 SYT10Q6XYQ8 523 aa16.23■□□□□ 0.19
OTOF-202ENST00000338581 CCDC8Q9H0W5 538 aaPredicted RBP16.23■□□□□ 0.19
OTOF-202ENST00000338581 FEZ2Q9UHY8 353 aaPredicted RBP16.23■□□□□ 0.19
OTOF-202ENST00000338581 PTGS1P23219 599 aa16.23■□□□□ 0.19
OTOF-202ENST00000338581 NBPF7P0C2Y1 421 aaPredicted RBP16.22■□□□□ 0.19
OTOF-202ENST00000338581 RBM5P52756 815 aaKnown RBP eCLIP16.22■□□□□ 0.19
OTOF-202ENST00000338581 HDAC1Q13547 482 aaPredicted RBP16.22■□□□□ 0.19
OTOF-202ENST00000338581 F13A1P00488 732 aa16.22■□□□□ 0.19
OTOF-202ENST00000338581 METAP2P50579 478 aaKnown RBP eCLIP16.22■□□□□ 0.19
OTOF-202ENST00000338581 RAB3GAP1Q15042 981 aa16.22■□□□□ 0.19
OTOF-202ENST00000338581 GTF3C6Q969F1 213 aa16.22■□□□□ 0.19
OTOF-202ENST00000338581 PSMA7O14818 248 aa16.22■□□□□ 0.19
OTOF-202ENST00000338581 CUL5Q93034 780 aa16.22■□□□□ 0.19
OTOF-202ENST00000338581 NPHP3Q7Z494 1330 aa16.21■□□□□ 0.19
OTOF-202ENST00000338581 INPP5BP32019 993 aa16.21■□□□□ 0.19
OTOF-202ENST00000338581 DNAJC21Q5F1R6 531 aaKnown RBP16.21■□□□□ 0.19
OTOF-202ENST00000338581 ZNF444Q8N0Y2 327 aaPredicted RBP16.21■□□□□ 0.19
OTOF-202ENST00000338581 TUBB2AQ13885 445 aa16.21■□□□□ 0.19
OTOF-202ENST00000338581 SMC5Q8IY18 1101 aa16.21■□□□□ 0.19
OTOF-202ENST00000338581 CACNA2D3Q8IZS8 1091 aa16.21■□□□□ 0.19
OTOF-202ENST00000338581 AFAP1L1Q8TED9 768 aa16.21■□□□□ 0.19
OTOF-202ENST00000338581 CCDC42Q96M95 316 aa16.21■□□□□ 0.19
OTOF-202ENST00000338581 TUBB2BQ9BVA1 445 aa16.21■□□□□ 0.19
OTOF-202ENST00000338581 ALDH3A1P30838 453 aa16.21■□□□□ 0.19
OTOF-202ENST00000338581 PPP2R3AQ06190 1150 aa16.21■□□□□ 0.19
OTOF-202ENST00000338581 TMEM67Q5HYA8 995 aa16.21■□□□□ 0.19
OTOF-202ENST00000338581 NCOA7Q8NI08 942 aa16.21■□□□□ 0.19
OTOF-202ENST00000338581 MTRF1LQ9UGC7 380 aaKnown RBP16.21■□□□□ 0.19
OTOF-202ENST00000338581 SWAP70Q9UH65 585 aa16.21■□□□□ 0.19
OTOF-202ENST00000338581 NSD3Q9BZ95 1437 aa16.2■□□□□ 0.18
OTOF-202ENST00000338581 CLNS1AP54105 237 aaKnown RBP16.2■□□□□ 0.18
OTOF-202ENST00000338581 EVCP57679 992 aa16.2■□□□□ 0.18
OTOF-202ENST00000338581 TNNC1P63316 161 aa16.2■□□□□ 0.18
OTOF-202ENST00000338581 STMN2Q93045 179 aa16.2■□□□□ 0.18
OTOF-202ENST00000338581 TRIM7Q9C029 511 aa16.2■□□□□ 0.18
OTOF-202ENST00000338581 EHMT1Q9H9B1 1298 aa16.2■□□□□ 0.18
OTOF-202ENST00000338581 SPINK5Q9NQ38 1064 aaPredicted RBP16.2■□□□□ 0.18
OTOF-202ENST00000338581 WDR97A6NE52 1622 aa16.2■□□□□ 0.18
OTOF-202ENST00000338581 CAVIN4Q5BKX8 364 aa16.2■□□□□ 0.18
OTOF-202ENST00000338581 PUS7Q96PZ0 661 aaKnown RBP16.2■□□□□ 0.18
OTOF-202ENST00000338581 RBM28Q9NW13 759 aaKnown RBP16.2■□□□□ 0.18
OTOF-202ENST00000338581 IGF1RP08069 1367 aa16.2■□□□□ 0.18
OTOF-202ENST00000338581 IGHDP01880 384 aa16.2■□□□□ 0.18
OTOF-202ENST00000338581 RHOXF2BP0C7M4 288 aa16.2■□□□□ 0.18
OTOF-202ENST00000338581 U2AF2P26368 475 aaKnown RBP eCLIP16.2■□□□□ 0.18
OTOF-202ENST00000338581 ATP11AP98196 1134 aa16.2■□□□□ 0.18
OTOF-202ENST00000338581 SF3B2Q13435 895 aaKnown RBP16.2■□□□□ 0.18
OTOF-202ENST00000338581 RAB3IL1Q8TBN0 382 aa16.2■□□□□ 0.18
OTOF-202ENST00000338581 RHOXF2Q9BQY4 288 aa16.2■□□□□ 0.18
OTOF-202ENST00000338581 ESCO1Q5FWF5 840 aa16.2■□□□□ 0.18
OTOF-202ENST00000338581 ZNF569Q5MCW4 686 aa16.2■□□□□ 0.18
OTOF-202ENST00000338581 PUF60Q9UHX1 559 aaKnown RBP16.2■□□□□ 0.18
OTOF-202ENST00000338581 NDUFAB1O14561 156 aa16.19■□□□□ 0.18
OTOF-202ENST00000338581 LMOD1P29536 600 aaPredicted RBP16.19■□□□□ 0.18
OTOF-202ENST00000338581 NUCB1Q02818 461 aa16.19■□□□□ 0.18
OTOF-202ENST00000338581 TAF7Q15545 349 aaPredicted RBP16.19■□□□□ 0.18
OTOF-202ENST00000338581 FAM184BQ9ULE4 1060 aa16.19■□□□□ 0.18
OTOF-202ENST00000338581 ATAD2BQ9ULI0 1458 aa16.19■□□□□ 0.18
OTOF-202ENST00000338581 PCK1P35558 622 aa16.19■□□□□ 0.18
OTOF-202ENST00000338581 ANKRD24Q8TF21 1146 aa16.19■□□□□ 0.18
OTOF-202ENST00000338581 THUMPD2Q9BTF0 503 aaKnown RBP16.19■□□□□ 0.18
OTOF-202ENST00000338581 RTEL1-TNFRSF6BF6WH68 1400 aa16.19■□□□□ 0.18
OTOF-202ENST00000338581 GIGYF1O75420 1035 aaPredicted RBP16.19■□□□□ 0.18
OTOF-202ENST00000338581 ARHGAP25P42331 645 aa16.19■□□□□ 0.18
OTOF-202ENST00000338581 INTS8Q75QN2 995 aaKnown RBP16.19■□□□□ 0.18
OTOF-202ENST00000338581 DZIP1Q86YF9 867 aaKnown RBP16.19■□□□□ 0.18
OTOF-202ENST00000338581 KRT13P13646 458 aa16.18■□□□□ 0.18
OTOF-202ENST00000338581 MAP7D1Q3KQU3 841 aa16.18■□□□□ 0.18
OTOF-202ENST00000338581 MICU3Q86XE3 530 aa16.18■□□□□ 0.18
OTOF-202ENST00000338581 TMOD2Q9NZR1 351 aa16.18■□□□□ 0.18
OTOF-202ENST00000338581 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.18■□□□□ 0.18
OTOF-202ENST00000338581 SYCP3Q8IZU3 236 aa16.18■□□□□ 0.18
OTOF-202ENST00000338581 BRF1Q92994 677 aa16.18■□□□□ 0.18
OTOF-202ENST00000338581 SLC26A6Q9BXS9 759 aa16.18■□□□□ 0.18
OTOF-202ENST00000338581 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.18■□□□□ 0.18
OTOF-202ENST00000338581 CCDC174Q6PII3 467 aa16.18■□□□□ 0.18
OTOF-202ENST00000338581 GUCA1BQ9UMX6 200 aa16.18■□□□□ 0.18
OTOF-202ENST00000338581 RRS1Q15050 365 aaKnown RBP16.17■□□□□ 0.18
OTOF-202ENST00000338581 USP37Q86T82 979 aa16.17■□□□□ 0.18
OTOF-202ENST00000338581 TLDC2A0PJX2 215 aa16.17■□□□□ 0.18
OTOF-202ENST00000338581 TTF1Q15361 905 aaPredicted RBP16.17■□□□□ 0.18
OTOF-202ENST00000338581 CCDC85AQ96PX6 553 aaPredicted RBP16.17■□□□□ 0.18
OTOF-202ENST00000338581 LZTFL1Q9NQ48 299 aa16.17■□□□□ 0.18
OTOF-202ENST00000338581 DNM1Q05193 864 aaKnown RBP16.17■□□□□ 0.18
OTOF-202ENST00000338581 MYRIPQ8NFW9 859 aa16.17■□□□□ 0.18
OTOF-202ENST00000338581 RTL1A6NKG5 1358 aa16.17■□□□□ 0.18
OTOF-202ENST00000338581 KARSQ15046 597 aaKnown RBP16.17■□□□□ 0.18
OTOF-202ENST00000338581 APBB1IPQ7Z5R6 666 aaPredicted RBP16.17■□□□□ 0.18
OTOF-202ENST00000338581 CNGA4Q8IV77 575 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms