RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 GBP3Q9H0R5 595 aa18.2■□□□□ 0.5
HDAC5-202ENST00000336057 NPHP3Q7Z494 1330 aa18.2■□□□□ 0.5
HDAC5-202ENST00000336057 SNW1Q13573 536 aaKnown RBP18.2■□□□□ 0.5
HDAC5-202ENST00000336057 KIF4BQ2VIQ3 1234 aa18.2■□□□□ 0.5
HDAC5-202ENST00000336057 RUFY3Q7L099 469 aa18.2■□□□□ 0.5
HDAC5-202ENST00000336057 ZNF397Q8NF99 534 aaPredicted RBP18.2■□□□□ 0.5
HDAC5-202ENST00000336057 CCDC102AQ96A19 550 aa18.2■□□□□ 0.5
HDAC5-202ENST00000336057 TTC12Q9H892 705 aaPredicted RBP18.2■□□□□ 0.5
HDAC5-202ENST00000336057 SKIDA1Q1XH10 827 aa18.2■□□□□ 0.5
HDAC5-202ENST00000336057 MFSD6Q6ZSS7 791 aa18.2■□□□□ 0.5
HDAC5-202ENST00000336057 CCDC150Q8NCX0 1101 aa18.2■□□□□ 0.5
HDAC5-202ENST00000336057 RAD50Q92878 1312 aa18.19■□□□□ 0.5
HDAC5-202ENST00000336057 MRPS27Q92552 414 aaKnown RBP18.19■□□□□ 0.5
HDAC5-202ENST00000336057 ZMYM3Q14202 1370 aa18.19■□□□□ 0.5
HDAC5-202ENST00000336057 CEP135Q66GS9 1140 aa18.19■□□□□ 0.5
HDAC5-202ENST00000336057 ISM2Q6H9L7 571 aa18.19■□□□□ 0.5
HDAC5-202ENST00000336057 SLC26A6Q9BXS9 759 aa18.19■□□□□ 0.5
HDAC5-202ENST00000336057 PRDM10Q9NQV6 1147 aa18.19■□□□□ 0.5
HDAC5-202ENST00000336057 BABAM1Q9NWV8 329 aa18.19■□□□□ 0.5
HDAC5-202ENST00000336057 GOLGA6L10A6NI86 522 aa18.18■□□□□ 0.5
HDAC5-202ENST00000336057 DNAJC25Q9H1X3 360 aa18.18■□□□□ 0.5
HDAC5-202ENST00000336057 UQCRFS1P1P0C7P4 283 aa18.18■□□□□ 0.5
HDAC5-202ENST00000336057 SYKP43405 635 aa18.18■□□□□ 0.5
HDAC5-202ENST00000336057 TYRO3Q06418 890 aa18.18■□□□□ 0.5
HDAC5-202ENST00000336057 PLXNC1O60486 1568 aa18.18■□□□□ 0.5
HDAC5-202ENST00000336057 PPP4R3BQ5MIZ7 849 aa18.18■□□□□ 0.5
HDAC5-202ENST00000336057 CPLX3Q8WVH0 158 aa18.18■□□□□ 0.5
HDAC5-202ENST00000336057 SEC63Q9UGP8 760 aaKnown RBP18.18■□□□□ 0.5
HDAC5-202ENST00000336057 CCDC171Q6TFL3 1326 aa18.18■□□□□ 0.5
HDAC5-202ENST00000336057 NLRP5P59047 1200 aa18.17■□□□□ 0.5
HDAC5-202ENST00000336057 PAG1Q9NWQ8 432 aa18.17■□□□□ 0.5
HDAC5-202ENST00000336057 TARBP1Q13395 1621 aaKnown RBP18.17■□□□□ 0.5
HDAC5-202ENST00000336057 ZNF521Q96K83 1311 aa18.17■□□□□ 0.5
HDAC5-202ENST00000336057 ERLIN2O94905 339 aa18.17■□□□□ 0.5
HDAC5-202ENST00000336057 KANK3Q6NY19 840 aa18.17■□□□□ 0.5
HDAC5-202ENST00000336057 ERICH4A6NGS2 130 aa18.17■□□□□ 0.5
HDAC5-202ENST00000336057 DZIP1Q86YF9 867 aaKnown RBP18.17■□□□□ 0.5
HDAC5-202ENST00000336057 ATP2B3Q16720 1220 aa18.16■□□□□ 0.5
HDAC5-202ENST00000336057 SBNO1A3KN83 1393 aa18.16■□□□□ 0.5
HDAC5-202ENST00000336057 AOX1Q06278 1338 aa18.16■□□□□ 0.5
HDAC5-202ENST00000336057 CCDC194A0A1B0GVG4 234 aa18.16■□□□□ 0.5
HDAC5-202ENST00000336057 SKILP12757 684 aa18.16■□□□□ 0.5
HDAC5-202ENST00000336057 GOLGA6L9A6NEM1 432 aa18.16■□□□□ 0.5
HDAC5-202ENST00000336057 SPA17Q15506 151 aa18.16■□□□□ 0.5
HDAC5-202ENST00000336057 ALG1Q9BT22 464 aa18.16■□□□□ 0.5
HDAC5-202ENST00000336057 ZBTB43O43298 467 aa18.16■□□□□ 0.5
HDAC5-202ENST00000336057 FKBP15Q5T1M5 1219 aa18.16■□□□□ 0.5
HDAC5-202ENST00000336057 CADPS2Q86UW7 1296 aa18.16■□□□□ 0.5
HDAC5-202ENST00000336057 NFATC2IPQ8NCF5 419 aa18.16■□□□□ 0.5
HDAC5-202ENST00000336057 IP6K1Q92551 441 aa18.16■□□□□ 0.5
HDAC5-202ENST00000336057 RBSNQ9H1K0 784 aa18.16■□□□□ 0.5
HDAC5-202ENST00000336057 EXOC5O00471 708 aa18.15■□□□□ 0.5
HDAC5-202ENST00000336057 FAM193AP78312 1265 aa18.15■□□□□ 0.5
HDAC5-202ENST00000336057 NUP88Q99567 741 aaPredicted RBP18.15■□□□□ 0.5
HDAC5-202ENST00000336057 TSPYL1Q9H0U9 437 aa18.15■□□□□ 0.5
HDAC5-202ENST00000336057 KIF24Q5T7B8 1368 aa18.15■□□□□ 0.5
HDAC5-202ENST00000336057 ABCC4O15439 1325 aa18.15■□□□□ 0.5
HDAC5-202ENST00000336057 CPA1P15085 419 aa18.15■□□□□ 0.5
HDAC5-202ENST00000336057 ZCRB1Q8TBF4 217 aaKnown RBP18.15■□□□□ 0.5
HDAC5-202ENST00000336057 BICC1Q9H694 974 aaKnown RBP18.15■□□□□ 0.5
HDAC5-202ENST00000336057 RNMTO43148 476 aaKnown RBP18.14■□□□□ 0.5
HDAC5-202ENST00000336057 ZNF444Q8N0Y2 327 aaPredicted RBP18.14■□□□□ 0.5
HDAC5-202ENST00000336057 ATP10AO60312 1499 aa18.14■□□□□ 0.49
HDAC5-202ENST00000336057 DDX21Q9NR30 783 aaKnown RBP eCLIP18.14■□□□□ 0.49
HDAC5-202ENST00000336057 YEATS4O95619 227 aa18.14■□□□□ 0.49
HDAC5-202ENST00000336057 HOXB7P09629 217 aa18.14■□□□□ 0.49
HDAC5-202ENST00000336057 TFCP2Q12800 502 aa18.14■□□□□ 0.49
HDAC5-202ENST00000336057 DHX32Q7L7V1 743 aaKnown RBP18.14■□□□□ 0.49
HDAC5-202ENST00000336057 CDC5LQ99459 802 aaKnown RBP18.14■□□□□ 0.49
HDAC5-202ENST00000336057 ZPR1O75312 459 aa18.13■□□□□ 0.49
HDAC5-202ENST00000336057 RBM5P52756 815 aaKnown RBP eCLIP18.13■□□□□ 0.49
HDAC5-202ENST00000336057 JAKMIP3Q5VZ66 844 aa18.13■□□□□ 0.49
HDAC5-202ENST00000336057 ZSCAN29Q8IWY8 852 aaPredicted RBP18.13■□□□□ 0.49
HDAC5-202ENST00000336057 RRAGDQ9NQL2 400 aaPredicted RBP18.13■□□□□ 0.49
HDAC5-202ENST00000336057 PNMA6EA0A0J9YXQ4 647 aa18.13■□□□□ 0.49
HDAC5-202ENST00000336057 GCP02774 474 aa18.13■□□□□ 0.49
HDAC5-202ENST00000336057 UBASH3AP57075 661 aa18.13■□□□□ 0.49
HDAC5-202ENST00000336057 CRACR2AQ9BSW2 395 aa18.13■□□□□ 0.49
HDAC5-202ENST00000336057 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.13■□□□□ 0.49
HDAC5-202ENST00000336057 ZNF445P59923 1031 aa18.13■□□□□ 0.49
HDAC5-202ENST00000336057 AOPEPQ8N6M6 819 aa18.13■□□□□ 0.49
HDAC5-202ENST00000336057 SGSM2O43147 1006 aa18.13■□□□□ 0.49
HDAC5-202ENST00000336057 PRC1O43663 620 aa18.13■□□□□ 0.49
HDAC5-202ENST00000336057 WTAPQ15007 396 aa18.13■□□□□ 0.49
HDAC5-202ENST00000336057 KRT23Q9C075 422 aa18.13■□□□□ 0.49
HDAC5-202ENST00000336057 KIAA0232Q92628 1395 aa18.13■□□□□ 0.49
HDAC5-202ENST00000336057 RNF113AO15541 343 aaKnown RBP18.12■□□□□ 0.49
HDAC5-202ENST00000336057 TAF4BQ92750 862 aa18.12■□□□□ 0.49
HDAC5-202ENST00000336057 TBX22Q9Y458 520 aa18.12■□□□□ 0.49
HDAC5-202ENST00000336057 SNX14Q9Y5W7 946 aa18.12■□□□□ 0.49
HDAC5-202ENST00000336057 ERVK-7P63135 1459 aa18.12■□□□□ 0.49
HDAC5-202ENST00000336057 SYNMO15061 1565 aa18.12■□□□□ 0.49
HDAC5-202ENST00000336057 PYM1Q9BRP8 204 aaKnown RBP18.12■□□□□ 0.49
HDAC5-202ENST00000336057 ANKIB1Q9P2G1 1089 aa18.12■□□□□ 0.49
HDAC5-202ENST00000336057 SPTLC2O15270 562 aa18.12■□□□□ 0.49
HDAC5-202ENST00000336057 USP19O94966 1318 aa18.12■□□□□ 0.49
HDAC5-202ENST00000336057 RDXP35241 583 aaKnown RBP18.12■□□□□ 0.49
HDAC5-202ENST00000336057 APOBRQ0VD83 1088 aa18.12■□□□□ 0.49
HDAC5-202ENST00000336057 SLC9C2Q5TAH2 1124 aa18.12■□□□□ 0.49
HDAC5-202ENST00000336057 RAB34Q9BZG1 259 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms