RNA–Protein interactions for RNA: ENST00000333535.8

SCN5A-202, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SCN5A, Length 8,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-202ENST00000333535 MYD88Q99836 296 aa13.44□□□□□ -0.26
SCN5A-202ENST00000333535 METAP2P50579 478 aaKnown RBP eCLIP13.44□□□□□ -0.26
SCN5A-202ENST00000333535 TMEM67Q5HYA8 995 aa13.44□□□□□ -0.26
SCN5A-202ENST00000333535 PPP1R42Q7Z4L9 355 aa13.44□□□□□ -0.26
SCN5A-202ENST00000333535 NCOA7Q8NI08 942 aa13.44□□□□□ -0.26
SCN5A-202ENST00000333535 ATP2A1O14983 1001 aa13.44□□□□□ -0.26
SCN5A-202ENST00000333535 IARSP41252 1262 aaKnown RBP13.44□□□□□ -0.26
SCN5A-202ENST00000333535 GNG11P61952 73 aa13.44□□□□□ -0.26
SCN5A-202ENST00000333535 KRT23Q9C075 422 aa13.44□□□□□ -0.26
SCN5A-202ENST00000333535 IQCGQ9H095 443 aaKnown RBP13.44□□□□□ -0.26
SCN5A-202ENST00000333535 KAT14Q9H8E8 782 aa13.44□□□□□ -0.26
SCN5A-202ENST00000333535 PRPF4BQ13523 1007 aaKnown RBP13.43□□□□□ -0.26
SCN5A-202ENST00000333535 GOLGA1Q92805 767 aa13.43□□□□□ -0.26
SCN5A-202ENST00000333535 ZFYP08048 801 aaPredicted RBP13.43□□□□□ -0.26
SCN5A-202ENST00000333535 MSL1Q68DK7 614 aa13.43□□□□□ -0.26
SCN5A-202ENST00000333535 DUOX2Q9NRD8 1548 aa13.43□□□□□ -0.26
SCN5A-202ENST00000333535 CCDC77Q9BR77 488 aa13.43□□□□□ -0.26
SCN5A-202ENST00000333535 RPRD2Q5VT52 1461 aaKnown RBP13.43□□□□□ -0.26
SCN5A-202ENST00000333535 GTF2A1P52655 376 aaPredicted RBP13.43□□□□□ -0.26
SCN5A-202ENST00000333535 KRT83P78385 493 aa13.43□□□□□ -0.26
SCN5A-202ENST00000333535 COMMD10Q9Y6G5 202 aa13.43□□□□□ -0.26
SCN5A-202ENST00000333535 RBM25P49756 843 aaKnown RBP13.43□□□□□ -0.26
SCN5A-202ENST00000333535 ABCA10Q8WWZ4 1543 aa13.43□□□□□ -0.26
SCN5A-202ENST00000333535 ZSCAN22P10073 491 aaPredicted RBP13.43□□□□□ -0.26
SCN5A-202ENST00000333535 PBRM1Q86U86 1689 aa13.42□□□□□ -0.26
SCN5A-202ENST00000333535 FBF1Q8TES7 1133 aa13.42□□□□□ -0.26
SCN5A-202ENST00000333535 SSFA2P28290 1259 aa13.42□□□□□ -0.26
SCN5A-202ENST00000333535 GPATCH11Q8N954 259 aa13.42□□□□□ -0.26
SCN5A-202ENST00000333535 NEK1Q96PY6 1258 aa13.42□□□□□ -0.26
SCN5A-202ENST00000333535 ECHDC1Q9NTX5 307 aa13.42□□□□□ -0.26
SCN5A-202ENST00000333535 TRMT112Q9UI30 125 aaKnown RBP13.42□□□□□ -0.26
SCN5A-202ENST00000333535 CLCN1P35523 988 aa13.42□□□□□ -0.26
SCN5A-202ENST00000333535 HDAC1Q13547 482 aaPredicted RBP13.42□□□□□ -0.26
SCN5A-202ENST00000333535 PRDM10Q9NQV6 1147 aa13.42□□□□□ -0.26
SCN5A-202ENST00000333535 KRT86O43790 486 aa13.42□□□□□ -0.26
SCN5A-202ENST00000333535 NBPF8Q3BBV2 869 aa13.42□□□□□ -0.26
SCN5A-202ENST00000333535 UTP14AQ9BVJ6 771 aaKnown RBP13.42□□□□□ -0.26
SCN5A-202ENST00000333535 CD109Q6YHK3 1445 aa13.41□□□□□ -0.26
SCN5A-202ENST00000333535 GNAQP50148 359 aa13.41□□□□□ -0.26
SCN5A-202ENST00000333535 CRNKL1Q9BZJ0 848 aaKnown RBP13.41□□□□□ -0.26
SCN5A-202ENST00000333535 CTAGE15A4D2H0 777 aa13.41□□□□□ -0.26
SCN5A-202ENST00000333535 SPDYE4A6NLX3 237 aa13.41□□□□□ -0.26
SCN5A-202ENST00000333535 CTAGE8P0CG41 777 aa13.41□□□□□ -0.26
SCN5A-202ENST00000333535 STAT6P42226 847 aa13.41□□□□□ -0.26
SCN5A-202ENST00000333535 TTC22Q5TAA0 569 aa13.41□□□□□ -0.26
SCN5A-202ENST00000333535 CTAGE6Q86UF2 777 aa13.41□□□□□ -0.26
SCN5A-202ENST00000333535 CTAGE4Q8IX94 777 aa13.41□□□□□ -0.26
SCN5A-202ENST00000333535 N4BP3O15049 544 aa13.41□□□□□ -0.26
SCN5A-202ENST00000333535 DHX37Q8IY37 1157 aaKnown RBP13.41□□□□□ -0.26
SCN5A-202ENST00000333535 ST5P78524 1137 aa13.41□□□□□ -0.26
SCN5A-202ENST00000333535 BICDL1Q6ZP65 573 aa13.41□□□□□ -0.26
SCN5A-202ENST00000333535 CABP5Q9NP86 173 aa13.41□□□□□ -0.26
SCN5A-202ENST00000333535 B4DLN1 442 aa13.4□□□□□ -0.26
SCN5A-202ENST00000333535 MRPL12P52815 198 aaKnown RBP13.4□□□□□ -0.26
SCN5A-202ENST00000333535 CCDC6Q16204 474 aa13.4□□□□□ -0.26
SCN5A-202ENST00000333535 ATL3Q6DD88 541 aa13.4□□□□□ -0.26
SCN5A-202ENST00000333535 CCDC129Q6ZRS4 1044 aa13.4□□□□□ -0.26
SCN5A-202ENST00000333535 FAM200AQ8TCP9 573 aa13.4□□□□□ -0.26
SCN5A-202ENST00000333535 TRIM47Q96LD4 638 aa13.4□□□□□ -0.26
SCN5A-202ENST00000333535 RBM27Q9P2N5 1060 aaKnown RBP13.4□□□□□ -0.26
SCN5A-202ENST00000333535 TRIM27P14373 513 aa13.4□□□□□ -0.26
SCN5A-202ENST00000333535 MCM10Q7L590 875 aa13.4□□□□□ -0.26
SCN5A-202ENST00000333535 BICDL2A1A5D9 508 aa13.4□□□□□ -0.26
SCN5A-202ENST00000333535 NUCB1Q02818 461 aa13.4□□□□□ -0.26
SCN5A-202ENST00000333535 TSPY2A6NKD2 308 aa13.4□□□□□ -0.26
SCN5A-202ENST00000333535 PTCD1O75127 700 aaKnown RBP13.4□□□□□ -0.26
SCN5A-202ENST00000333535 TBCAO75347 108 aaKnown RBP13.4□□□□□ -0.26
SCN5A-202ENST00000333535 TACC1O75410 805 aa13.4□□□□□ -0.26
SCN5A-202ENST00000333535 TCERG1LQ5VWI1 586 aa13.4□□□□□ -0.26
SCN5A-202ENST00000333535 MYO5CQ9NQX4 1742 aa13.4□□□□□ -0.26
SCN5A-202ENST00000333535 SNX21Q969T3 373 aa13.4□□□□□ -0.26
SCN5A-202ENST00000333535 SWAP70Q9UH65 585 aa13.4□□□□□ -0.26
SCN5A-202ENST00000333535 UQCRFS1P1P0C7P4 283 aa13.4□□□□□ -0.27
SCN5A-202ENST00000333535 SAMM50Q9Y512 469 aa13.39□□□□□ -0.27
SCN5A-202ENST00000333535 CCT2P78371 535 aaKnown RBP13.39□□□□□ -0.27
SCN5A-202ENST00000333535 CCDC14Q49A88 953 aa13.39□□□□□ -0.27
SCN5A-202ENST00000333535 ABCC5O15440 1437 aa13.39□□□□□ -0.27
SCN5A-202ENST00000333535 EBAG9O00559 213 aa13.39□□□□□ -0.27
SCN5A-202ENST00000333535 CCDC152Q4G0S7 254 aa13.39□□□□□ -0.27
SCN5A-202ENST00000333535 PSMA7O14818 248 aa13.39□□□□□ -0.27
SCN5A-202ENST00000333535 PRC1O43663 620 aa13.39□□□□□ -0.27
SCN5A-202ENST00000333535 SMC6Q96SB8 1091 aa13.39□□□□□ -0.27
SCN5A-202ENST00000333535 SYNCQ9H7C4 482 aa13.39□□□□□ -0.27
SCN5A-202ENST00000333535 TTLL12Q14166 644 aaPredicted RBP13.39□□□□□ -0.27
SCN5A-202ENST00000333535 ATP5DP30049 168 aa13.39□□□□□ -0.27
SCN5A-202ENST00000333535 KIF5AQ12840 1032 aa13.39□□□□□ -0.27
SCN5A-202ENST00000333535 TUBB2AQ13885 445 aa13.39□□□□□ -0.27
SCN5A-202ENST00000333535 ANKRD24Q8TF21 1146 aa13.39□□□□□ -0.27
SCN5A-202ENST00000333535 TUBB2BQ9BVA1 445 aa13.39□□□□□ -0.27
SCN5A-202ENST00000333535 USP16Q9Y5T5 823 aa13.39□□□□□ -0.27
SCN5A-202ENST00000333535 ANKRD36BQ8N2N9 1353 aa13.39□□□□□ -0.27
SCN5A-202ENST00000333535 ANO6Q4KMQ2 910 aa13.38□□□□□ -0.27
SCN5A-202ENST00000333535 ARHGAP45Q92619 1136 aa13.38□□□□□ -0.27
SCN5A-202ENST00000333535 GUCY1B3Q02153 619 aa13.38□□□□□ -0.27
SCN5A-202ENST00000333535 EIF4G3O43432 1585 aaKnown RBP13.38□□□□□ -0.27
SCN5A-202ENST00000333535 ATP2A2P16615 1042 aaKnown RBP13.38□□□□□ -0.27
SCN5A-202ENST00000333535 NOLC1Q14978 699 aaKnown RBP eCLIP13.38□□□□□ -0.27
SCN5A-202ENST00000333535 AKR1B10O60218 316 aa13.38□□□□□ -0.27
SCN5A-202ENST00000333535 SMARCA5O60264 1052 aaPredicted RBP13.38□□□□□ -0.27
SCN5A-202ENST00000333535 FLIIQ13045 1269 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms