RNA–Protein interactions for RNA: ENST00000332772.4

SIMC1-201, Transcript of SUMO interacting motifs containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIMC1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1-201ENST00000332772 TM6SF1Q9BZW5 370 aa10.92□□□□□ -0.66
SIMC1-201ENST00000332772 AKAP2Q9Y2D5 859 aa10.92□□□□□ -0.66
SIMC1-201ENST00000332772 ABCC12Q96J65 1359 aa10.91□□□□□ -0.66
SIMC1-201ENST00000332772 DDX11L8A8MPP1 907 aa10.91□□□□□ -0.66
SIMC1-201ENST00000332772 MCM4P33991 863 aa10.91□□□□□ -0.66
SIMC1-201ENST00000332772 NEK4P51957 841 aa10.91□□□□□ -0.66
SIMC1-201ENST00000332772 CUL4AQ13619 759 aa10.91□□□□□ -0.66
SIMC1-201ENST00000332772 CCDC57Q2TAC2 916 aa10.91□□□□□ -0.66
SIMC1-201ENST00000332772 NLRP10Q86W26 655 aa10.91□□□□□ -0.66
SIMC1-201ENST00000332772 KLHDC4Q8TBB5 520 aa10.91□□□□□ -0.66
SIMC1-201ENST00000332772 GBP4Q96PP9 640 aa10.91□□□□□ -0.66
SIMC1-201ENST00000332772 HAUS7Q99871 368 aa10.91□□□□□ -0.66
SIMC1-201ENST00000332772 DBNLQ9UJU6 430 aaKnown RBP10.91□□□□□ -0.66
SIMC1-201ENST00000332772 COL5A3P25940 1745 aaPredicted RBP10.91□□□□□ -0.66
SIMC1-201ENST00000332772 BCL9LQ86UU0 1499 aa10.91□□□□□ -0.66
SIMC1-201ENST00000332772 UBAP1LF5GYI3 381 aa10.91□□□□□ -0.66
SIMC1-201ENST00000332772 CWC27Q6UX04 472 aaKnown RBP10.91□□□□□ -0.66
SIMC1-201ENST00000332772 ZNF34Q8IZ26 560 aa10.91□□□□□ -0.66
SIMC1-201ENST00000332772 CCDC87Q9NVE4 849 aa10.91□□□□□ -0.66
SIMC1-201ENST00000332772 ZBTB1Q9Y2K1 713 aa10.91□□□□□ -0.66
SIMC1-201ENST00000332772 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.91□□□□□ -0.66
SIMC1-201ENST00000332772 ZNF609O15014 1411 aa10.9□□□□□ -0.66
SIMC1-201ENST00000332772 MAP4K4O95819 1239 aaPredicted RBP10.9□□□□□ -0.66
SIMC1-201ENST00000332772 DZIP3Q86Y13 1208 aaKnown RBP10.9□□□□□ -0.66
SIMC1-201ENST00000332772 SYTL4Q96C24 671 aaPredicted RBP10.9□□□□□ -0.66
SIMC1-201ENST00000332772 TLR7Q9NYK1 1049 aaKnown RBP10.9□□□□□ -0.66
SIMC1-201ENST00000332772 CEP126Q9P2H0 1117 aa10.9□□□□□ -0.66
SIMC1-201ENST00000332772 PALLDQ8WX93 1383 aa10.9□□□□□ -0.67
SIMC1-201ENST00000332772 MED23Q9ULK4 1368 aa10.9□□□□□ -0.67
SIMC1-201ENST00000332772 CCDC171Q6TFL3 1326 aa10.89□□□□□ -0.67
SIMC1-201ENST00000332772 LOC102724428A0A0B4J2F2 783 aa10.89□□□□□ -0.67
SIMC1-201ENST00000332772 NUTM2BA6NNL0 878 aaPredicted RBP10.89□□□□□ -0.67
SIMC1-201ENST00000332772 NUTM2EB1AL46 878 aaPredicted RBP10.89□□□□□ -0.67
SIMC1-201ENST00000332772 SIK1P57059 783 aa10.89□□□□□ -0.67
SIMC1-201ENST00000332772 PIP4K2BP78356 416 aa10.89□□□□□ -0.67
SIMC1-201ENST00000332772 IFIT5Q13325 482 aaKnown RBP10.89□□□□□ -0.67
SIMC1-201ENST00000332772 LRRFIP1Q32MZ4 808 aaKnown RBP10.89□□□□□ -0.67
SIMC1-201ENST00000332772 TSGA10IPQ3SY00 556 aa10.89□□□□□ -0.67
SIMC1-201ENST00000332772 PARP10Q53GL7 1025 aa10.89□□□□□ -0.67
SIMC1-201ENST00000332772 INTS5Q6P9B9 1019 aaKnown RBP10.89□□□□□ -0.67
SIMC1-201ENST00000332772 NUTM2AQ8IVF1 878 aaPredicted RBP10.89□□□□□ -0.67
SIMC1-201ENST00000332772 JARID2Q92833 1246 aaPredicted RBP10.89□□□□□ -0.67
SIMC1-201ENST00000332772 MAP4K1Q92918 833 aa10.89□□□□□ -0.67
SIMC1-201ENST00000332772 FSD1Q9BTV5 496 aa10.89□□□□□ -0.67
SIMC1-201ENST00000332772 IL25Q9H293 177 aa10.89□□□□□ -0.67
SIMC1-201ENST00000332772 BOLA2Q9H3K6 86 aa10.89□□□□□ -0.67
SIMC1-201ENST00000332772 HMG20BQ9P0W2 317 aa10.89□□□□□ -0.67
SIMC1-201ENST00000332772 PALD1Q9ULE6 856 aa10.89□□□□□ -0.67
SIMC1-201ENST00000332772 CHMP3Q9Y3E7 222 aa10.89□□□□□ -0.67
SIMC1-201ENST00000332772 THSD7AQ9UPZ6 1657 aa10.89□□□□□ -0.67
SIMC1-201ENST00000332772 LAMB2P55268 1798 aa10.89□□□□□ -0.67
SIMC1-201ENST00000332772 PDE8AO60658 829 aa10.89□□□□□ -0.67
SIMC1-201ENST00000332772 ZKSCAN1P17029 563 aaPredicted RBP10.89□□□□□ -0.67
SIMC1-201ENST00000332772 GSE1Q14687 1217 aa10.89□□□□□ -0.67
SIMC1-201ENST00000332772 NECTIN1Q15223 517 aa10.89□□□□□ -0.67
SIMC1-201ENST00000332772 RNF20Q5VTR2 975 aa10.89□□□□□ -0.67
SIMC1-201ENST00000332772 SPRYD3Q8NCJ5 442 aa10.89□□□□□ -0.67
SIMC1-201ENST00000332772 SNX14Q9Y5W7 946 aa10.89□□□□□ -0.67
SIMC1-201ENST00000332772 CYP2E1P05181 493 aaPredicted RBP10.88□□□□□ -0.67
SIMC1-201ENST00000332772 DEKP35659 375 aaKnown RBP10.88□□□□□ -0.67
SIMC1-201ENST00000332772 ATP6V1AP38606 617 aa10.88□□□□□ -0.67
SIMC1-201ENST00000332772 HLFQ16534 295 aa10.88□□□□□ -0.67
SIMC1-201ENST00000332772 KBTBD3Q8NAB2 608 aa10.88□□□□□ -0.67
SIMC1-201ENST00000332772 ZNF512BQ96KM6 892 aaPredicted RBP10.88□□□□□ -0.67
SIMC1-201ENST00000332772 DBNDD2Q9BQY9 259 aa10.88□□□□□ -0.67
SIMC1-201ENST00000332772 ALDH8A1Q9H2A2 487 aaPredicted RBP10.88□□□□□ -0.67
SIMC1-201ENST00000332772 CCDC9Q9Y3X0 531 aaKnown RBP10.88□□□□□ -0.67
SIMC1-201ENST00000332772 BCORQ6W2J9 1755 aa10.88□□□□□ -0.67
SIMC1-201ENST00000332772 RTL9Q8NET4 1388 aa10.88□□□□□ -0.67
SIMC1-201ENST00000332772 SH3TC1Q8TE82 1336 aa10.88□□□□□ -0.67
SIMC1-201ENST00000332772 PDIA4P13667 645 aaKnown RBP10.87□□□□□ -0.67
SIMC1-201ENST00000332772 PSMA5P28066 241 aa10.87□□□□□ -0.67
SIMC1-201ENST00000332772 CRKLP46109 303 aaKnown RBP10.87□□□□□ -0.67
SIMC1-201ENST00000332772 CTSWP56202 376 aa10.87□□□□□ -0.67
SIMC1-201ENST00000332772 NMIQ13287 307 aaPredicted RBP10.87□□□□□ -0.67
SIMC1-201ENST00000332772 SKOR2Q2VWA4 1001 aaPredicted RBP10.87□□□□□ -0.67
SIMC1-201ENST00000332772 USPL1Q5W0Q7 1092 aa10.87□□□□□ -0.67
SIMC1-201ENST00000332772 CLEC4GQ6UXB4 293 aa10.87□□□□□ -0.67
SIMC1-201ENST00000332772 TTLL11Q8NHH1 800 aa10.87□□□□□ -0.67
SIMC1-201ENST00000332772 TNPO1Q92973 898 aaKnown RBP10.87□□□□□ -0.67
SIMC1-201ENST00000332772 NGLY1Q96IV0 654 aa10.87□□□□□ -0.67
SIMC1-201ENST00000332772 TMX3Q96JJ7 454 aa10.87□□□□□ -0.67
SIMC1-201ENST00000332772 MYH14Q7Z406 1995 aaKnown RBP10.87□□□□□ -0.67
SIMC1-201ENST00000332772 LRP5O75197 1615 aa10.87□□□□□ -0.67
SIMC1-201ENST00000332772 ANKRD18BA2A2Z9 1011 aa10.87□□□□□ -0.67
SIMC1-201ENST00000332772 VPS53Q5VIR6 699 aa10.87□□□□□ -0.67
SIMC1-201ENST00000332772 FAM89AQ96GI7 184 aa10.87□□□□□ -0.67
SIMC1-201ENST00000332772 TTC14Q96N46 770 aa10.87□□□□□ -0.67
SIMC1-201ENST00000332772 ZSWIM6Q9HCJ5 1215 aa10.87□□□□□ -0.67
SIMC1-201ENST00000332772 HELLSQ9NRZ9 838 aa10.87□□□□□ -0.67
SIMC1-201ENST00000332772 ZNF652Q9Y2D9 606 aa10.87□□□□□ -0.67
SIMC1-201ENST00000332772 ZNF330Q9Y3S2 320 aaPredicted RBP10.87□□□□□ -0.67
SIMC1-201ENST00000332772 NHSQ6T4R5 1651 aa10.86□□□□□ -0.67
SIMC1-201ENST00000332772 A0A1B0GUL7 405 aa10.86□□□□□ -0.67
SIMC1-201ENST00000332772 IRS4O14654 1257 aaPredicted RBP10.86□□□□□ -0.67
SIMC1-201ENST00000332772 KRT32Q14532 448 aa10.86□□□□□ -0.67
SIMC1-201ENST00000332772 LRRC24Q50LG9 513 aa10.86□□□□□ -0.67
SIMC1-201ENST00000332772 CCDC158Q5M9N0 1113 aa10.86□□□□□ -0.67
SIMC1-201ENST00000332772 RC3H1Q5TC82 1133 aaKnown RBP10.86□□□□□ -0.67
SIMC1-201ENST00000332772 ZSCAN31Q96LW9 406 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms