RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 TOGARAM1Q9Y4F4 1720 aa17.83■□□□□ 0.44
CLCNKA-201ENST00000331433 ATG9AQ7Z3C6 839 aa17.82■□□□□ 0.44
CLCNKA-201ENST00000331433 SMC3Q9UQE7 1217 aa17.82■□□□□ 0.44
CLCNKA-201ENST00000331433 TCHHQ07283 1943 aa17.82■□□□□ 0.44
CLCNKA-201ENST00000331433 SYT1P21579 422 aa17.81■□□□□ 0.44
CLCNKA-201ENST00000331433 NASPP49321 788 aaPredicted RBP17.81■□□□□ 0.44
CLCNKA-201ENST00000331433 DDX46Q7L014 1031 aaKnown RBP17.81■□□□□ 0.44
CLCNKA-201ENST00000331433 CCDC191Q8NCU4 936 aa17.81■□□□□ 0.44
CLCNKA-201ENST00000331433 ZNF594Q96JF6 807 aaPredicted RBP17.81■□□□□ 0.44
CLCNKA-201ENST00000331433 TCEANC2Q96MN5 208 aa17.81■□□□□ 0.44
CLCNKA-201ENST00000331433 ASAP1Q9ULH1 1129 aa17.81■□□□□ 0.44
CLCNKA-201ENST00000331433 NEUROD6Q96NK8 337 aa17.81■□□□□ 0.44
CLCNKA-201ENST00000331433 STX6O43752 255 aa17.8■□□□□ 0.44
CLCNKA-201ENST00000331433 TAF5LO75529 589 aa17.8■□□□□ 0.44
CLCNKA-201ENST00000331433 ST3GAL1Q11201 340 aa17.8■□□□□ 0.44
CLCNKA-201ENST00000331433 ME3Q16798 604 aa17.8■□□□□ 0.44
CLCNKA-201ENST00000331433 HAUS7Q99871 368 aa17.8■□□□□ 0.44
CLCNKA-201ENST00000331433 BTG4Q9NY30 223 aa17.8■□□□□ 0.44
CLCNKA-201ENST00000331433 LRRC24Q50LG9 513 aa17.8■□□□□ 0.44
CLCNKA-201ENST00000331433 CCDC129Q6ZRS4 1044 aa17.8■□□□□ 0.44
CLCNKA-201ENST00000331433 NECAB1Q8N987 351 aa17.8■□□□□ 0.44
CLCNKA-201ENST00000331433 SEC62Q99442 399 aaKnown RBP17.8■□□□□ 0.44
CLCNKA-201ENST00000331433 TPCN1Q9ULQ1 816 aa17.8■□□□□ 0.44
CLCNKA-201ENST00000331433 JCADQ9P266 1359 aa17.79■□□□□ 0.44
CLCNKA-201ENST00000331433 MBD3O95983 291 aa17.79■□□□□ 0.44
CLCNKA-201ENST00000331433 ZSCAN22P10073 491 aaPredicted RBP17.79■□□□□ 0.44
CLCNKA-201ENST00000331433 GJB2P29033 226 aa17.79■□□□□ 0.44
CLCNKA-201ENST00000331433 PRIM1P49642 420 aaKnown RBP17.79■□□□□ 0.44
CLCNKA-201ENST00000331433 TIMM10P62072 90 aa17.79■□□□□ 0.44
CLCNKA-201ENST00000331433 RNF20Q5VTR2 975 aa17.79■□□□□ 0.44
CLCNKA-201ENST00000331433 PIGBQ92521 554 aa17.79■□□□□ 0.44
CLCNKA-201ENST00000331433 ZNF609O15014 1411 aa17.79■□□□□ 0.44
CLCNKA-201ENST00000331433 NHSL1Q5SYE7 1610 aa17.79■□□□□ 0.44
CLCNKA-201ENST00000331433 GADD45BO75293 160 aaPredicted RBP17.79■□□□□ 0.44
CLCNKA-201ENST00000331433 PSMA5P28066 241 aa17.79■□□□□ 0.44
CLCNKA-201ENST00000331433 DNAJC10Q8IXB1 793 aa17.79■□□□□ 0.44
CLCNKA-201ENST00000331433 SH2B1Q9NRF2 756 aaPredicted RBP17.79■□□□□ 0.44
CLCNKA-201ENST00000331433 KAT6BQ8WYB5 2073 aa17.79■□□□□ 0.44
CLCNKA-201ENST00000331433 SYCE3A1L190 88 aa17.78■□□□□ 0.44
CLCNKA-201ENST00000331433 USP48Q86UV5 1035 aa17.78■□□□□ 0.44
CLCNKA-201ENST00000331433 ZSCAN31Q96LW9 406 aaPredicted RBP17.78■□□□□ 0.44
CLCNKA-201ENST00000331433 BLOC1S2Q6QNY1 142 aa17.78■□□□□ 0.44
CLCNKA-201ENST00000331433 IL15P40933 162 aaPredicted RBP17.77■□□□□ 0.44
CLCNKA-201ENST00000331433 PUS3Q9BZE2 481 aaKnown RBP17.77■□□□□ 0.44
CLCNKA-201ENST00000331433 RBSNQ9H1K0 784 aa17.77■□□□□ 0.44
CLCNKA-201ENST00000331433 EYA2O00167 538 aa17.77■□□□□ 0.43
CLCNKA-201ENST00000331433 SLFNL1Q499Z3 407 aa17.77■□□□□ 0.43
CLCNKA-201ENST00000331433 ISCA1Q9BUE6 129 aa17.77■□□□□ 0.43
CLCNKA-201ENST00000331433 CNPY2Q9Y2B0 182 aa17.77■□□□□ 0.43
CLCNKA-201ENST00000331433 GOLIM4O00461 696 aa17.76■□□□□ 0.43
CLCNKA-201ENST00000331433 TCIRG1Q13488 830 aa17.76■□□□□ 0.43
CLCNKA-201ENST00000331433 CCDC85AQ96PX6 553 aaPredicted RBP17.76■□□□□ 0.43
CLCNKA-201ENST00000331433 F13A1P00488 732 aa17.76■□□□□ 0.43
CLCNKA-201ENST00000331433 RPS6KB1P23443 525 aa17.76■□□□□ 0.43
CLCNKA-201ENST00000331433 KBTBD3Q8NAB2 608 aa17.76■□□□□ 0.43
CLCNKA-201ENST00000331433 ATG3Q9NT62 314 aa17.76■□□□□ 0.43
CLCNKA-201ENST00000331433 TPRNQ4KMQ1 711 aa17.75■□□□□ 0.43
CLCNKA-201ENST00000331433 USPL1Q5W0Q7 1092 aa17.75■□□□□ 0.43
CLCNKA-201ENST00000331433 HMG20BQ9P0W2 317 aa17.75■□□□□ 0.43
CLCNKA-201ENST00000331433 RFX7Q2KHR2 1363 aa17.75■□□□□ 0.43
CLCNKA-201ENST00000331433 MCMDC2Q4G0Z9 681 aa17.75■□□□□ 0.43
CLCNKA-201ENST00000331433 FAM89AQ96GI7 184 aa17.75■□□□□ 0.43
CLCNKA-201ENST00000331433 PAG1Q9NWQ8 432 aa17.75■□□□□ 0.43
CLCNKA-201ENST00000331433 TOB2Q14106 344 aaPredicted RBP17.74■□□□□ 0.43
CLCNKA-201ENST00000331433 LRSAM1Q6UWE0 723 aa17.74■□□□□ 0.43
CLCNKA-201ENST00000331433 GPR108Q9NPR9 543 aa17.74■□□□□ 0.43
CLCNKA-201ENST00000331433 A0A1B0GUL7 405 aa17.74■□□□□ 0.43
CLCNKA-201ENST00000331433 TSGA10IPQ3SY00 556 aa17.74■□□□□ 0.43
CLCNKA-201ENST00000331433 MTMR6Q9Y217 621 aa17.74■□□□□ 0.43
CLCNKA-201ENST00000331433 KIF6Q6ZMV9 814 aa17.73■□□□□ 0.43
CLCNKA-201ENST00000331433 TRIM44Q96DX7 344 aaPredicted RBP17.73■□□□□ 0.43
CLCNKA-201ENST00000331433 VPS37CA5D8V6 355 aaPredicted RBP17.73■□□□□ 0.43
CLCNKA-201ENST00000331433 ITGB4P16144 1822 aa17.72■□□□□ 0.43
CLCNKA-201ENST00000331433 CIAO1O76071 339 aa17.72■□□□□ 0.43
CLCNKA-201ENST00000331433 STARD3NLO95772 234 aa17.72■□□□□ 0.43
CLCNKA-201ENST00000331433 CYP21A2P08686 494 aa17.72■□□□□ 0.43
CLCNKA-201ENST00000331433 CCDC173Q0VFZ6 552 aa17.72■□□□□ 0.43
CLCNKA-201ENST00000331433 CCDC57Q2TAC2 916 aa17.72■□□□□ 0.43
CLCNKA-201ENST00000331433 VSIG10Q8N0Z9 540 aa17.72■□□□□ 0.43
CLCNKA-201ENST00000331433 SYNE4Q8N205 404 aa17.72■□□□□ 0.43
CLCNKA-201ENST00000331433 TMEM87AQ8NBN3 555 aa17.72■□□□□ 0.43
CLCNKA-201ENST00000331433 FIBPO43427 364 aa17.72■□□□□ 0.43
CLCNKA-201ENST00000331433 STK3Q13188 491 aa17.72■□□□□ 0.43
CLCNKA-201ENST00000331433 ANKRD1Q15327 319 aa17.72■□□□□ 0.43
CLCNKA-201ENST00000331433 ANP32BQ92688 251 aaKnown RBP17.72■□□□□ 0.43
CLCNKA-201ENST00000331433 TEX13AQ9BXU3 409 aaPredicted RBP17.72■□□□□ 0.43
CLCNKA-201ENST00000331433 PALLDQ8WX93 1383 aa17.71■□□□□ 0.43
CLCNKA-201ENST00000331433 SH3TC1Q8TE82 1336 aa17.71■□□□□ 0.43
CLCNKA-201ENST00000331433 U3KPZ7 1027 aaPredicted RBP17.71■□□□□ 0.43
CLCNKA-201ENST00000331433 IFIT1P09914 478 aaKnown RBP17.71■□□□□ 0.42
CLCNKA-201ENST00000331433 GPTP24298 496 aa17.71■□□□□ 0.42
CLCNKA-201ENST00000331433 TRIM28Q13263 835 aaKnown RBP17.71■□□□□ 0.42
CLCNKA-201ENST00000331433 HLFQ16534 295 aa17.71■□□□□ 0.42
CLCNKA-201ENST00000331433 NEK1Q96PY6 1258 aa17.71■□□□□ 0.42
CLCNKA-201ENST00000331433 SLC4A9Q96Q91 983 aa17.71■□□□□ 0.42
CLCNKA-201ENST00000331433 PPP1R9BQ96SB3 815 aa17.71■□□□□ 0.42
CLCNKA-201ENST00000331433 CEP126Q9P2H0 1117 aa17.71■□□□□ 0.42
CLCNKA-201ENST00000331433 PCCAP05165 728 aaPredicted RBP17.7■□□□□ 0.42
CLCNKA-201ENST00000331433 DNM1Q05193 864 aaKnown RBP17.7■□□□□ 0.42
CLCNKA-201ENST00000331433 KRT32Q14532 448 aa17.7■□□□□ 0.42
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