RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 ARHGEF1Q92888 912 aaKnown RBP19.18■□□□□ 0.66
PDGFB-201ENST00000331163 NLRP3Q96P20 1036 aa19.18■□□□□ 0.66
PDGFB-201ENST00000331163 RAB11FIP3O75154 756 aa19.18■□□□□ 0.66
PDGFB-201ENST00000331163 GOLGA6L3A6NEY3 463 aa19.17■□□□□ 0.66
PDGFB-201ENST00000331163 L1TD1Q5T7N2 865 aaKnown RBP19.17■□□□□ 0.66
PDGFB-201ENST00000331163 PKNOX2Q96KN3 472 aa19.17■□□□□ 0.66
PDGFB-201ENST00000331163 NSFL1CQ9UNZ2 370 aaKnown RBP19.17■□□□□ 0.66
PDGFB-201ENST00000331163 CHGBP05060 677 aa19.17■□□□□ 0.66
PDGFB-201ENST00000331163 TBC1D9BQ66K14 1250 aa19.17■□□□□ 0.66
PDGFB-201ENST00000331163 A0A1B0GUL7 405 aa19.17■□□□□ 0.66
PDGFB-201ENST00000331163 NEK4P51957 841 aa19.17■□□□□ 0.66
PDGFB-201ENST00000331163 FOSBP53539 338 aa19.17■□□□□ 0.66
PDGFB-201ENST00000331163 TPTE2Q6XPS3 522 aa19.17■□□□□ 0.66
PDGFB-201ENST00000331163 REC8O95072 547 aa19.16■□□□□ 0.66
PDGFB-201ENST00000331163 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.16■□□□□ 0.66
PDGFB-201ENST00000331163 C6orf229H3BNL8 230 aa19.16■□□□□ 0.66
PDGFB-201ENST00000331163 GLRX3O76003 335 aaKnown RBP19.16■□□□□ 0.66
PDGFB-201ENST00000331163 RPGRQ92834 1020 aaKnown RBP19.16■□□□□ 0.66
PDGFB-201ENST00000331163 MTMR7Q9Y216 660 aa19.16■□□□□ 0.66
PDGFB-201ENST00000331163 SASH1O94885 1247 aa19.16■□□□□ 0.66
PDGFB-201ENST00000331163 ATP2B3Q16720 1220 aa19.16■□□□□ 0.66
PDGFB-201ENST00000331163 TXNRD1Q16881 649 aa19.16■□□□□ 0.66
PDGFB-201ENST00000331163 BMP2KLQ5H9B9 411 aa19.16■□□□□ 0.66
PDGFB-201ENST00000331163 KAZALD1Q96I82 304 aa19.16■□□□□ 0.66
PDGFB-201ENST00000331163 ADORA1P30542 326 aa19.15■□□□□ 0.66
PDGFB-201ENST00000331163 ISY1Q9ULR0 285 aaKnown RBP19.15■□□□□ 0.66
PDGFB-201ENST00000331163 CCDC129Q6ZRS4 1044 aa19.15■□□□□ 0.66
PDGFB-201ENST00000331163 CNBD1Q8NA66 436 aa19.15■□□□□ 0.66
PDGFB-201ENST00000331163 GPR101Q96P66 508 aaPredicted RBP19.15■□□□□ 0.66
PDGFB-201ENST00000331163 CCDC152Q4G0S7 254 aa19.15■□□□□ 0.66
PDGFB-201ENST00000331163 ZBTB38Q8NAP3 1195 aaPredicted RBP19.15■□□□□ 0.66
PDGFB-201ENST00000331163 PHLPP1O60346 1717 aa19.14■□□□□ 0.66
PDGFB-201ENST00000331163 INTS5Q6P9B9 1019 aaKnown RBP19.14■□□□□ 0.65
PDGFB-201ENST00000331163 PTPN12Q05209 780 aaKnown RBP19.14■□□□□ 0.65
PDGFB-201ENST00000331163 EYA2O00167 538 aa19.13■□□□□ 0.65
PDGFB-201ENST00000331163 RIMBP2O15034 1052 aa19.13■□□□□ 0.65
PDGFB-201ENST00000331163 LRP2BPQ9P2M1 347 aa19.13■□□□□ 0.65
PDGFB-201ENST00000331163 HSP90AA2PQ14568 343 aaPredicted RBP19.13■□□□□ 0.65
PDGFB-201ENST00000331163 ANKRD18AQ8IVF6 992 aa19.13■□□□□ 0.65
PDGFB-201ENST00000331163 CPA1P15085 419 aa19.12■□□□□ 0.65
PDGFB-201ENST00000331163 CTSWP56202 376 aa19.12■□□□□ 0.65
PDGFB-201ENST00000331163 HAND2P61296 217 aa19.12■□□□□ 0.65
PDGFB-201ENST00000331163 TNNI3KQ59H18 835 aa19.12■□□□□ 0.65
PDGFB-201ENST00000331163 FAM227BQ96M60 508 aa19.12■□□□□ 0.65
PDGFB-201ENST00000331163 RAI14Q9P0K7 980 aa19.12■□□□□ 0.65
PDGFB-201ENST00000331163 FPGT-TNNI3KV9GXZ4 949 aa19.12■□□□□ 0.65
PDGFB-201ENST00000331163 PDE8AO60658 829 aa19.12■□□□□ 0.65
PDGFB-201ENST00000331163 HSP90B1P14625 803 aaKnown RBP19.12■□□□□ 0.65
PDGFB-201ENST00000331163 POTEAQ6S8J7 498 aa19.12■□□□□ 0.65
PDGFB-201ENST00000331163 NCLP19338 710 aaKnown RBP19.11■□□□□ 0.65
PDGFB-201ENST00000331163 EIF5P55010 431 aaKnown RBP19.11■□□□□ 0.65
PDGFB-201ENST00000331163 PRPF40BQ6NWY9 871 aaKnown RBP19.11■□□□□ 0.65
PDGFB-201ENST00000331163 SEC62Q99442 399 aaKnown RBP19.11■□□□□ 0.65
PDGFB-201ENST00000331163 LRRC4BQ9NT99 713 aa19.11■□□□□ 0.65
PDGFB-201ENST00000331163 F8W031 263 aaPredicted RBP19.11■□□□□ 0.65
PDGFB-201ENST00000331163 RRP12Q5JTH9 1297 aaKnown RBP19.1■□□□□ 0.65
PDGFB-201ENST00000331163 XRCC6P12956 609 aaKnown RBP eCLIP19.1■□□□□ 0.65
PDGFB-201ENST00000331163 IL15P40933 162 aaPredicted RBP19.1■□□□□ 0.65
PDGFB-201ENST00000331163 RUFY2Q8WXA3 655 aa19.1■□□□□ 0.65
PDGFB-201ENST00000331163 DBNLQ9UJU6 430 aaKnown RBP19.1■□□□□ 0.65
PDGFB-201ENST00000331163 BCL9O00512 1426 aa19.1■□□□□ 0.65
PDGFB-201ENST00000331163 RGS12O14924 1447 aa19.1■□□□□ 0.65
PDGFB-201ENST00000331163 STK3Q13188 491 aa19.09■□□□□ 0.65
PDGFB-201ENST00000331163 AMIGO3Q86WK7 504 aa19.09■□□□□ 0.65
PDGFB-201ENST00000331163 TTLL11Q8NHH1 800 aa19.09■□□□□ 0.65
PDGFB-201ENST00000331163 WTIPA6NIX2 430 aaPredicted RBP19.09■□□□□ 0.65
PDGFB-201ENST00000331163 PCCAP05165 728 aaPredicted RBP19.09■□□□□ 0.65
PDGFB-201ENST00000331163 UBN2Q6ZU65 1347 aa19.09■□□□□ 0.65
PDGFB-201ENST00000331163 COL15A1P39059 1388 aa19.09■□□□□ 0.65
PDGFB-201ENST00000331163 H7C1W4 665 aa19.09■□□□□ 0.65
PDGFB-201ENST00000331163 LTBP4Q8N2S1 1624 aa19.08■□□□□ 0.65
PDGFB-201ENST00000331163 XAGE2Q96GT9 111 aa19.08■□□□□ 0.65
PDGFB-201ENST00000331163 CDC5LQ99459 802 aaKnown RBP19.08■□□□□ 0.65
PDGFB-201ENST00000331163 GYG1P46976 350 aa19.08■□□□□ 0.64
PDGFB-201ENST00000331163 ANTXR1Q9H6X2 564 aa19.08■□□□□ 0.64
PDGFB-201ENST00000331163 ATF5Q9Y2D1 282 aaPredicted RBP19.08■□□□□ 0.64
PDGFB-201ENST00000331163 RAB11FIP4Q86YS3 637 aa19.08■□□□□ 0.64
PDGFB-201ENST00000331163 ARID3AQ99856 593 aa19.08■□□□□ 0.64
PDGFB-201ENST00000331163 LRRC2Q9BYS8 371 aa19.08■□□□□ 0.64
PDGFB-201ENST00000331163 TBC1D2Q9BYX2 928 aa19.08■□□□□ 0.64
PDGFB-201ENST00000331163 IBTKQ9P2D0 1353 aaPredicted RBP19.07■□□□□ 0.64
PDGFB-201ENST00000331163 EZH2Q15910 746 aaKnown RBP19.07■□□□□ 0.64
PDGFB-201ENST00000331163 BCL9LQ86UU0 1499 aa19.07■□□□□ 0.64
PDGFB-201ENST00000331163 MIGA1Q8NAN2 632 aa19.07■□□□□ 0.64
PDGFB-201ENST00000331163 ERBB4Q15303 1308 aa19.07■□□□□ 0.64
PDGFB-201ENST00000331163 UTRNP46939 3433 aa19.06■□□□□ 0.64
PDGFB-201ENST00000331163 RAD21O60216 631 aa19.06■□□□□ 0.64
PDGFB-201ENST00000331163 BCAMP50895 628 aa19.06■□□□□ 0.64
PDGFB-201ENST00000331163 RPS6KA4O75676 772 aa19.06■□□□□ 0.64
PDGFB-201ENST00000331163 NMIQ13287 307 aaPredicted RBP19.06■□□□□ 0.64
PDGFB-201ENST00000331163 TRIM44Q96DX7 344 aaPredicted RBP19.06■□□□□ 0.64
PDGFB-201ENST00000331163 TRPM3Q9HCF6 1732 aaPredicted RBP19.06■□□□□ 0.64
PDGFB-201ENST00000331163 FOXO4P98177 505 aa19.06■□□□□ 0.64
PDGFB-201ENST00000331163 AKAP2Q9Y2D5 859 aa19.06■□□□□ 0.64
PDGFB-201ENST00000331163 CAMTA2O94983 1202 aa19.05■□□□□ 0.64
PDGFB-201ENST00000331163 ZKSCAN1P17029 563 aaPredicted RBP19.05■□□□□ 0.64
PDGFB-201ENST00000331163 PSDA5PKW4 1024 aaPredicted RBP19.05■□□□□ 0.64
PDGFB-201ENST00000331163 CELF1Q92879 486 aaKnown RBP19.05■□□□□ 0.64
PDGFB-201ENST00000331163 ISCA1Q9BUE6 129 aa19.05■□□□□ 0.64
PDGFB-201ENST00000331163 ZBTB7AO95365 584 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 191.6 ms