RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 C4BP0C0L5 1744 aa8.55□□□□□ -1.04
SMG1-201ENST00000330588 ST8SIA5O15466 376 aa8.55□□□□□ -1.04
SMG1-201ENST00000330588 MTHFSP49914 203 aa8.55□□□□□ -1.04
SMG1-201ENST00000330588 MMP16P51512 607 aa8.55□□□□□ -1.04
SMG1-201ENST00000330588 ZNF827Q17R98 1081 aa8.55□□□□□ -1.04
SMG1-201ENST00000330588 SCN11AQ9UI33 1791 aa8.55□□□□□ -1.04
SMG1-201ENST00000330588 KAT6BQ8WYB5 2073 aa8.55□□□□□ -1.04
SMG1-201ENST00000330588 IRF6O14896 467 aa8.54□□□□□ -1.04
SMG1-201ENST00000330588 Q3C1V9 767 aa8.54□□□□□ -1.04
SMG1-201ENST00000330588 PIGBQ92521 554 aa8.54□□□□□ -1.04
SMG1-201ENST00000330588 TMOD3Q9NYL9 352 aa8.54□□□□□ -1.04
SMG1-201ENST00000330588 KDM6AO15550 1401 aaPredicted RBP8.54□□□□□ -1.04
SMG1-201ENST00000330588 PNPLA7Q6ZV29 1317 aa8.54□□□□□ -1.04
SMG1-201ENST00000330588 DIAPH1O60610 1272 aaKnown RBP8.53□□□□□ -1.04
SMG1-201ENST00000330588 UBR3Q6ZT12 1888 aa8.53□□□□□ -1.04
SMG1-201ENST00000330588 BRPF1P55201 1214 aaPredicted RBP8.52□□□□□ -1.04
SMG1-201ENST00000330588 AKAP4Q5JQC9 854 aa8.52□□□□□ -1.04
SMG1-201ENST00000330588 C1orf141Q5JVX7 400 aa8.52□□□□□ -1.04
SMG1-201ENST00000330588 ZNF530Q6P9A1 599 aaPredicted RBP8.52□□□□□ -1.04
SMG1-201ENST00000330588 MPRIPQ6WCQ1 1025 aa8.52□□□□□ -1.04
SMG1-201ENST00000330588 TFCP2L1Q9NZI6 479 aa8.52□□□□□ -1.04
SMG1-201ENST00000330588 PPP1R1BQ9UD71 204 aaPredicted RBP8.52□□□□□ -1.04
SMG1-201ENST00000330588 COL5A3P25940 1745 aaPredicted RBP8.52□□□□□ -1.05
SMG1-201ENST00000330588 LOC102724428A0A0B4J2F2 783 aa8.52□□□□□ -1.05
SMG1-201ENST00000330588 SSFA2P28290 1259 aa8.52□□□□□ -1.05
SMG1-201ENST00000330588 SIK1P57059 783 aa8.52□□□□□ -1.05
SMG1-201ENST00000330588 CC2D1BQ5T0F9 858 aaKnown RBP8.52□□□□□ -1.05
SMG1-201ENST00000330588 SULT6B1Q6IMI4 303 aa8.52□□□□□ -1.05
SMG1-201ENST00000330588 KDM4AO75164 1064 aa8.51□□□□□ -1.05
SMG1-201ENST00000330588 DXOO77932 396 aaKnown RBP8.51□□□□□ -1.05
SMG1-201ENST00000330588 ZBTB7AO95365 584 aa8.51□□□□□ -1.05
SMG1-201ENST00000330588 RC3H1Q5TC82 1133 aaKnown RBP8.51□□□□□ -1.05
SMG1-201ENST00000330588 AEBP1Q8IUX7 1158 aa8.51□□□□□ -1.05
SMG1-201ENST00000330588 CYP4X1Q8N118 509 aa8.51□□□□□ -1.05
SMG1-201ENST00000330588 CFAP53Q96M91 514 aa8.51□□□□□ -1.05
SMG1-201ENST00000330588 PDGFDQ9GZP0 370 aaPredicted RBP8.51□□□□□ -1.05
SMG1-201ENST00000330588 VIRMAQ69YN4 1812 aaKnown RBP8.5□□□□□ -1.05
SMG1-201ENST00000330588 POLD1P28340 1107 aa8.5□□□□□ -1.05
SMG1-201ENST00000330588 SMCPP49901 116 aaPredicted RBP8.5□□□□□ -1.05
SMG1-201ENST00000330588 USP46P62068 366 aa8.5□□□□□ -1.05
SMG1-201ENST00000330588 ATG3Q9NT62 314 aa8.5□□□□□ -1.05
SMG1-201ENST00000330588 CNTNAP4Q9C0A0 1308 aa8.5□□□□□ -1.05
SMG1-201ENST00000330588 WNT7AO00755 349 aa8.49□□□□□ -1.05
SMG1-201ENST00000330588 CABP4P57796 275 aa8.49□□□□□ -1.05
SMG1-201ENST00000330588 CTC1Q2NKJ3 1217 aa8.49□□□□□ -1.05
SMG1-201ENST00000330588 LCE2AQ5TA79 106 aaPredicted RBP8.49□□□□□ -1.05
SMG1-201ENST00000330588 AK7Q96M32 723 aa8.49□□□□□ -1.05
SMG1-201ENST00000330588 ARXQ96QS3 562 aa8.49□□□□□ -1.05
SMG1-201ENST00000330588 USB1Q9BQ65 265 aaKnown RBP8.49□□□□□ -1.05
SMG1-201ENST00000330588 ASAP1Q9ULH1 1129 aa8.49□□□□□ -1.05
SMG1-201ENST00000330588 UBR2Q8IWV8 1755 aa8.48□□□□□ -1.05
SMG1-201ENST00000330588 ZBTB24O43167 697 aaPredicted RBP8.48□□□□□ -1.05
SMG1-201ENST00000330588 MDM2Q00987 491 aaPredicted RBP8.48□□□□□ -1.05
SMG1-201ENST00000330588 TRIM32Q13049 653 aa8.48□□□□□ -1.05
SMG1-201ENST00000330588 COL23A1Q86Y22 540 aaPredicted RBP8.48□□□□□ -1.05
SMG1-201ENST00000330588 GAS2L2Q8NHY3 880 aa8.48□□□□□ -1.05
SMG1-201ENST00000330588 CCDC102AQ96A19 550 aa8.48□□□□□ -1.05
SMG1-201ENST00000330588 DACH1Q9UI36 760 aa8.48□□□□□ -1.05
SMG1-201ENST00000330588 NUDCQ9Y266 331 aa8.48□□□□□ -1.05
SMG1-201ENST00000330588 TJP1Q07157 1748 aa8.48□□□□□ -1.05
SMG1-201ENST00000330588 SIPA1L3O60292 1781 aaPredicted RBP8.48□□□□□ -1.05
SMG1-201ENST00000330588 PPP2R1AP30153 589 aa8.48□□□□□ -1.05
SMG1-201ENST00000330588 KRI1Q8N9T8 703 aaKnown RBP8.48□□□□□ -1.05
SMG1-201ENST00000330588 SYT17Q9BSW7 474 aa8.48□□□□□ -1.05
SMG1-201ENST00000330588 SLC52A2Q9HAB3 445 aa8.48□□□□□ -1.05
SMG1-201ENST00000330588 TRIM66O15016 1216 aa8.47□□□□□ -1.05
SMG1-201ENST00000330588 RNMTO43148 476 aaKnown RBP8.47□□□□□ -1.05
SMG1-201ENST00000330588 HOXA2O43364 376 aa8.47□□□□□ -1.05
SMG1-201ENST00000330588 KCNQ4P56696 695 aa8.47□□□□□ -1.05
SMG1-201ENST00000330588 ITPK1Q13572 414 aa8.47□□□□□ -1.05
SMG1-201ENST00000330588 LINC00116Q8NCU8 138 aa8.47□□□□□ -1.05
SMG1-201ENST00000330588 HLA-CQ95604 372 aa8.47□□□□□ -1.05
SMG1-201ENST00000330588 FHDC1Q9C0D6 1143 aaPredicted RBP8.47□□□□□ -1.05
SMG1-201ENST00000330588 CEMIPQ8WUJ3 1361 aa8.47□□□□□ -1.05
SMG1-201ENST00000330588 KCPQ6ZWJ8 1503 aa8.46□□□□□ -1.06
SMG1-201ENST00000330588 MTHFSDQ2M296 383 aaKnown RBP8.46□□□□□ -1.06
SMG1-201ENST00000330588 CD2APQ9Y5K6 639 aa8.46□□□□□ -1.06
SMG1-201ENST00000330588 AXIN1O15169 862 aa8.45□□□□□ -1.06
SMG1-201ENST00000330588 HTATSF1O43719 755 aaKnown RBP8.45□□□□□ -1.06
SMG1-201ENST00000330588 RPS6KA4O75676 772 aa8.45□□□□□ -1.06
SMG1-201ENST00000330588 HMOX1P09601 288 aa8.45□□□□□ -1.06
SMG1-201ENST00000330588 SMPD1P17405 629 aa8.45□□□□□ -1.06
SMG1-201ENST00000330588 RALBP1Q15311 655 aa8.45□□□□□ -1.06
SMG1-201ENST00000330588 NEUROD2Q15784 382 aa8.45□□□□□ -1.06
SMG1-201ENST00000330588 NFATC2IPQ8NCF5 419 aa8.45□□□□□ -1.06
SMG1-201ENST00000330588 SNIP1Q8TAD8 396 aaKnown RBP8.45□□□□□ -1.06
SMG1-201ENST00000330588 RSPH6AQ9H0K4 717 aa8.45□□□□□ -1.06
SMG1-201ENST00000330588 FAM217BQ9NTX9 383 aaPredicted RBP8.45□□□□□ -1.06
SMG1-201ENST00000330588 RTCBQ9Y3I0 505 aaKnown RBP8.45□□□□□ -1.06
SMG1-201ENST00000330588 KIF13BQ9NQT8 1826 aa8.45□□□□□ -1.06
SMG1-201ENST00000330588 C4AP0C0L4 1744 aa8.45□□□□□ -1.06
SMG1-201ENST00000330588 GNAT3A8MTJ3 354 aa8.44□□□□□ -1.06
SMG1-201ENST00000330588 TREML4Q6UXN2 200 aa8.44□□□□□ -1.06
SMG1-201ENST00000330588 SLC4A9Q96Q91 983 aa8.44□□□□□ -1.06
SMG1-201ENST00000330588 GPCPD1Q9NPB8 672 aa8.44□□□□□ -1.06
SMG1-201ENST00000330588 TTC24A2A3L6 582 aaPredicted RBP8.44□□□□□ -1.06
SMG1-201ENST00000330588 U2SURPO15042 1029 aaKnown RBP8.44□□□□□ -1.06
SMG1-201ENST00000330588 NLGN1Q8N2Q7 840 aa8.44□□□□□ -1.06
SMG1-201ENST00000330588 MRGPRX2Q96LB1 330 aa8.44□□□□□ -1.06
SMG1-201ENST00000330588 PNNQ9H307 717 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms