RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 TIMM10P62072 90 aa20.57■□□□□ 0.88
DDX41-201ENST00000330503 MYT1Q01538 1121 aa20.57■□□□□ 0.88
DDX41-201ENST00000330503 HSPA4P34932 840 aa20.56■□□□□ 0.88
DDX41-201ENST00000330503 FRAT2O75474 233 aaPredicted RBP20.56■□□□□ 0.88
DDX41-201ENST00000330503 MEX3CQ5U5Q3 659 aaKnown RBP20.56■□□□□ 0.88
DDX41-201ENST00000330503 LINC00116Q8NCU8 138 aa20.56■□□□□ 0.88
DDX41-201ENST00000330503 RUFY2Q8WXA3 655 aa20.56■□□□□ 0.88
DDX41-201ENST00000330503 EDC3Q96F86 508 aaKnown RBP20.56■□□□□ 0.88
DDX41-201ENST00000330503 GJD4Q96KN9 370 aaPredicted RBP20.56■□□□□ 0.88
DDX41-201ENST00000330503 RAD50Q92878 1312 aa20.55■□□□□ 0.88
DDX41-201ENST00000330503 ZNF831Q5JPB2 1677 aa20.55■□□□□ 0.88
DDX41-201ENST00000330503 COL5A3P25940 1745 aaPredicted RBP20.55■□□□□ 0.88
DDX41-201ENST00000330503 IFIT5Q13325 482 aaKnown RBP20.55■□□□□ 0.88
DDX41-201ENST00000330503 SUSD4Q5VX71 490 aa20.55■□□□□ 0.88
DDX41-201ENST00000330503 CHMP5Q9NZZ3 219 aa20.55■□□□□ 0.88
DDX41-201ENST00000330503 FBXO3Q9UK99 471 aa20.55■□□□□ 0.88
DDX41-201ENST00000330503 CTSWP56202 376 aa20.54■□□□□ 0.88
DDX41-201ENST00000330503 NMIQ13287 307 aaPredicted RBP20.54■□□□□ 0.88
DDX41-201ENST00000330503 FAM227BQ96M60 508 aa20.54■□□□□ 0.88
DDX41-201ENST00000330503 NEUROD6Q96NK8 337 aa20.54■□□□□ 0.88
DDX41-201ENST00000330503 GREM2Q9H772 168 aa20.54■□□□□ 0.88
DDX41-201ENST00000330503 KCNQ4P56696 695 aa20.54■□□□□ 0.88
DDX41-201ENST00000330503 FAM182BQ5T319 152 aa20.54■□□□□ 0.88
DDX41-201ENST00000330503 HAUS7Q99871 368 aa20.54■□□□□ 0.88
DDX41-201ENST00000330503 AFF2P51816 1311 aa20.54■□□□□ 0.88
DDX41-201ENST00000330503 HIP1O00291 1037 aa20.53■□□□□ 0.88
DDX41-201ENST00000330503 PDE8AO60658 829 aa20.53■□□□□ 0.88
DDX41-201ENST00000330503 PTH1RQ03431 593 aa20.53■□□□□ 0.88
DDX41-201ENST00000330503 SNRKQ9NRH2 765 aa20.53■□□□□ 0.88
DDX41-201ENST00000330503 CEP126Q9P2H0 1117 aa20.53■□□□□ 0.88
DDX41-201ENST00000330503 NDUFB9Q9Y6M9 179 aa20.53■□□□□ 0.88
DDX41-201ENST00000330503 ZNF609O15014 1411 aa20.53■□□□□ 0.88
DDX41-201ENST00000330503 ST18O60284 1047 aa20.53■□□□□ 0.88
DDX41-201ENST00000330503 ITGA6P23229 1130 aa20.53■□□□□ 0.88
DDX41-201ENST00000330503 KIAA1211Q6ZU35 1233 aa20.53■□□□□ 0.88
DDX41-201ENST00000330503 FSD1Q9BTV5 496 aa20.53■□□□□ 0.88
DDX41-201ENST00000330503 NEK4P51957 841 aa20.52■□□□□ 0.88
DDX41-201ENST00000330503 FOXD4L1Q9NU39 408 aa20.52■□□□□ 0.88
DDX41-201ENST00000330503 RIPOR2Q9Y4F9 1068 aa20.52■□□□□ 0.88
DDX41-201ENST00000330503 A0A1B0GUL7 405 aa20.51■□□□□ 0.87
DDX41-201ENST00000330503 ONECUT3O60422 494 aaPredicted RBP20.51■□□□□ 0.87
DDX41-201ENST00000330503 TAF7LQ5H9L4 462 aa20.51■□□□□ 0.87
DDX41-201ENST00000330503 A0A0D9SFI3 127 aa20.5■□□□□ 0.87
DDX41-201ENST00000330503 MYH3P11055 1940 aa20.5■□□□□ 0.87
DDX41-201ENST00000330503 RASEFQ8IZ41 740 aa20.5■□□□□ 0.87
DDX41-201ENST00000330503 SNX14Q9Y5W7 946 aa20.5■□□□□ 0.87
DDX41-201ENST00000330503 ATRNO75882 1429 aa20.5■□□□□ 0.87
DDX41-201ENST00000330503 ANKRD18BA2A2Z9 1011 aa20.5■□□□□ 0.87
DDX41-201ENST00000330503 AK7Q96M32 723 aa20.5■□□□□ 0.87
DDX41-201ENST00000330503 DNAJC2Q99543 621 aaKnown RBP20.5■□□□□ 0.87
DDX41-201ENST00000330503 UTP14AQ9BVJ6 771 aaKnown RBP20.5■□□□□ 0.87
DDX41-201ENST00000330503 BTAF1O14981 1849 aa20.49■□□□□ 0.87
DDX41-201ENST00000330503 PARP10Q53GL7 1025 aa20.49■□□□□ 0.87
DDX41-201ENST00000330503 SH3TC1Q8TE82 1336 aa20.48■□□□□ 0.87
DDX41-201ENST00000330503 FAM177BA6PVY3 158 aa20.48■□□□□ 0.87
DDX41-201ENST00000330503 HCLS1P14317 486 aaPredicted RBP20.48■□□□□ 0.87
DDX41-201ENST00000330503 CIZ1Q9ULV3 898 aaPredicted RBP20.48■□□□□ 0.87
DDX41-201ENST00000330503 NHSQ6T4R5 1651 aa20.48■□□□□ 0.87
DDX41-201ENST00000330503 CNTNAP4Q9C0A0 1308 aa20.48■□□□□ 0.87
DDX41-201ENST00000330503 LDHAL6AQ6ZMR3 332 aa20.48■□□□□ 0.87
DDX41-201ENST00000330503 KCNB2Q92953 911 aa20.48■□□□□ 0.87
DDX41-201ENST00000330503 NIP7Q9Y221 180 aaKnown RBP eCLIP20.48■□□□□ 0.87
DDX41-201ENST00000330503 AKAP2Q9Y2D5 859 aa20.48■□□□□ 0.87
DDX41-201ENST00000330503 CCDC171Q6TFL3 1326 aa20.47■□□□□ 0.87
DDX41-201ENST00000330503 NTSR2O95665 410 aa20.47■□□□□ 0.87
DDX41-201ENST00000330503 HSP90AA1P07900 732 aaKnown RBP20.47■□□□□ 0.87
DDX41-201ENST00000330503 ADORA1P30542 326 aa20.47■□□□□ 0.87
DDX41-201ENST00000330503 RIC1Q4ADV7 1423 aa20.47■□□□□ 0.87
DDX41-201ENST00000330503 MED23Q9ULK4 1368 aa20.47■□□□□ 0.87
DDX41-201ENST00000330503 CHGBP05060 677 aa20.47■□□□□ 0.87
DDX41-201ENST00000330503 RC3H1Q5TC82 1133 aaKnown RBP20.47■□□□□ 0.87
DDX41-201ENST00000330503 SMIM5Q71RC9 77 aa20.47■□□□□ 0.87
DDX41-201ENST00000330503 DDX46Q7L014 1031 aaKnown RBP20.47■□□□□ 0.87
DDX41-201ENST00000330503 MAP4K1Q92918 833 aa20.47■□□□□ 0.87
DDX41-201ENST00000330503 XAGE2Q96GT9 111 aa20.47■□□□□ 0.87
DDX41-201ENST00000330503 TRPC5Q9UL62 973 aaPredicted RBP20.47■□□□□ 0.87
DDX41-201ENST00000330503 NECTIN1Q15223 517 aa20.46■□□□□ 0.87
DDX41-201ENST00000330503 CLEC4GQ6UXB4 293 aa20.46■□□□□ 0.87
DDX41-201ENST00000330503 UPF3BQ9BZI7 483 aaKnown RBP20.46■□□□□ 0.87
DDX41-201ENST00000330503 RFX7Q2KHR2 1363 aa20.46■□□□□ 0.87
DDX41-201ENST00000330503 ZNF589Q86UQ0 364 aaPredicted RBP20.45■□□□□ 0.86
DDX41-201ENST00000330503 SEPT12Q8IYM1 358 aa20.45■□□□□ 0.86
DDX41-201ENST00000330503 KBTBD3Q8NAB2 608 aa20.45■□□□□ 0.86
DDX41-201ENST00000330503 BCORQ6W2J9 1755 aa20.45■□□□□ 0.86
DDX41-201ENST00000330503 IFIT1P09914 478 aaKnown RBP20.45■□□□□ 0.86
DDX41-201ENST00000330503 METTL24Q5JXM2 366 aa20.45■□□□□ 0.86
DDX41-201ENST00000330503 VGLL2Q8N8G2 317 aa20.45■□□□□ 0.86
DDX41-201ENST00000330503 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.45■□□□□ 0.86
DDX41-201ENST00000330503 CNNM1Q9NRU3 951 aa20.45■□□□□ 0.86
DDX41-201ENST00000330503 PAG1Q9NWQ8 432 aa20.45■□□□□ 0.86
DDX41-201ENST00000330503 GOLIM4O00461 696 aa20.44■□□□□ 0.86
DDX41-201ENST00000330503 PRPF40BQ6NWY9 871 aaKnown RBP20.44■□□□□ 0.86
DDX41-201ENST00000330503 MCM2P49736 904 aa20.44■□□□□ 0.86
DDX41-201ENST00000330503 TMX3Q96JJ7 454 aa20.44■□□□□ 0.86
DDX41-201ENST00000330503 ZNF652Q9Y2D9 606 aa20.44■□□□□ 0.86
DDX41-201ENST00000330503 RBM8AQ9Y5S9 174 aaKnown RBP20.44■□□□□ 0.86
DDX41-201ENST00000330503 DDX60Q8IY21 1712 aaKnown RBP20.43■□□□□ 0.86
DDX41-201ENST00000330503 RPS6KA4O75676 772 aa20.43■□□□□ 0.86
DDX41-201ENST00000330503 BCL2L12Q9HB09 334 aa20.43■□□□□ 0.86
DDX41-201ENST00000330503 SBF2Q86WG5 1849 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms