RNA–Protein interactions for RNA: ENST00000329629.8

FNDC1-202, Transcript of fibronectin type III domain containing 1, humanhuman

TSL 1 (best)

Gene FNDC1, Length 6,034 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-202ENST00000329629 A0A087WZG4 1122 aa16.17■□□□□ 0.18
FNDC1-202ENST00000329629 CCDC6Q16204 474 aa16.17■□□□□ 0.18
FNDC1-202ENST00000329629 LRSAM1Q6UWE0 723 aa16.17■□□□□ 0.18
FNDC1-202ENST00000329629 RIMS2Q9UQ26 1411 aa16.17■□□□□ 0.18
FNDC1-202ENST00000329629 MXRA7P84157 204 aa16.17■□□□□ 0.18
FNDC1-202ENST00000329629 MAP3K12Q12852 859 aa16.17■□□□□ 0.18
FNDC1-202ENST00000329629 MCM6Q14566 821 aa16.17■□□□□ 0.18
FNDC1-202ENST00000329629 CATIPQ7Z7H3 387 aa16.17■□□□□ 0.18
FNDC1-202ENST00000329629 RFC4P35249 363 aa16.17■□□□□ 0.18
FNDC1-202ENST00000329629 MSL1Q68DK7 614 aa16.17■□□□□ 0.18
FNDC1-202ENST00000329629 USP16Q9Y5T5 823 aa16.17■□□□□ 0.18
FNDC1-202ENST00000329629 SLC5A1P13866 664 aa16.16■□□□□ 0.18
FNDC1-202ENST00000329629 NSD2O96028 1365 aa16.16■□□□□ 0.18
FNDC1-202ENST00000329629 CCDC160A6NGH7 325 aa16.16■□□□□ 0.18
FNDC1-202ENST00000329629 GPTP24298 496 aa16.16■□□□□ 0.18
FNDC1-202ENST00000329629 AMPD3Q01432 767 aa16.16■□□□□ 0.18
FNDC1-202ENST00000329629 ALDH1L2Q3SY69 923 aa16.16■□□□□ 0.18
FNDC1-202ENST00000329629 CCDC155Q8N6L0 562 aa16.16■□□□□ 0.18
FNDC1-202ENST00000329629 UBASH3AP57075 661 aa16.16■□□□□ 0.18
FNDC1-202ENST00000329629 NOLC1Q14978 699 aaKnown RBP eCLIP16.16■□□□□ 0.18
FNDC1-202ENST00000329629 KIAA0753Q2KHM9 967 aa16.16■□□□□ 0.18
FNDC1-202ENST00000329629 ANO6Q4KMQ2 910 aa16.16■□□□□ 0.18
FNDC1-202ENST00000329629 TSHZ3Q63HK5 1081 aa16.16■□□□□ 0.18
FNDC1-202ENST00000329629 DNAI1Q9UI46 699 aa16.16■□□□□ 0.18
FNDC1-202ENST00000329629 DBF4Q9UBU7 674 aaPredicted RBP16.16■□□□□ 0.18
FNDC1-202ENST00000329629 IKBKGQ9Y6K9 419 aa16.16■□□□□ 0.18
FNDC1-202ENST00000329629 ITSN2Q9NZM3 1697 aa16.16■□□□□ 0.18
FNDC1-202ENST00000329629 CETN1Q12798 172 aa16.15■□□□□ 0.18
FNDC1-202ENST00000329629 MICALL1Q8N3F8 863 aa16.15■□□□□ 0.18
FNDC1-202ENST00000329629 ZBTB3Q9H5J0 574 aa16.15■□□□□ 0.18
FNDC1-202ENST00000329629 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.15■□□□□ 0.18
FNDC1-202ENST00000329629 V9GYY5 206 aaPredicted RBP16.15■□□□□ 0.18
FNDC1-202ENST00000329629 N4BP3O15049 544 aa16.15■□□□□ 0.18
FNDC1-202ENST00000329629 BBXQ8WY36 941 aaPredicted RBP16.15■□□□□ 0.18
FNDC1-202ENST00000329629 WDHD1O75717 1129 aaPredicted RBP16.15■□□□□ 0.18
FNDC1-202ENST00000329629 CKAP4Q07065 602 aaKnown RBP16.15■□□□□ 0.18
FNDC1-202ENST00000329629 TSNARE1Q96NA8 513 aa16.15■□□□□ 0.18
FNDC1-202ENST00000329629 DDX23Q9BUQ8 820 aaKnown RBP16.15■□□□□ 0.18
FNDC1-202ENST00000329629 TTLL12Q14166 644 aaPredicted RBP16.15■□□□□ 0.18
FNDC1-202ENST00000329629 SLC4A8Q2Y0W8 1093 aa16.15■□□□□ 0.18
FNDC1-202ENST00000329629 TRIM47Q96LD4 638 aa16.15■□□□□ 0.18
FNDC1-202ENST00000329629 TCP11L1Q9NUJ3 509 aa16.15■□□□□ 0.18
FNDC1-202ENST00000329629 SYCP2Q9BX26 1530 aa16.15■□□□□ 0.18
FNDC1-202ENST00000329629 CTAGE15A4D2H0 777 aa16.15■□□□□ 0.18
FNDC1-202ENST00000329629 CTAGE8P0CG41 777 aa16.15■□□□□ 0.18
FNDC1-202ENST00000329629 KLHL40Q2TBA0 621 aa16.15■□□□□ 0.18
FNDC1-202ENST00000329629 CTAGE6Q86UF2 777 aa16.15■□□□□ 0.18
FNDC1-202ENST00000329629 CTAGE4Q8IX94 777 aa16.15■□□□□ 0.18
FNDC1-202ENST00000329629 VAT1LQ9HCJ6 419 aa16.15■□□□□ 0.18
FNDC1-202ENST00000329629 HAND2P61296 217 aa16.14■□□□□ 0.18
FNDC1-202ENST00000329629 ATRIPQ8WXE1 791 aa16.14■□□□□ 0.18
FNDC1-202ENST00000329629 IARSP41252 1262 aaKnown RBP16.14■□□□□ 0.17
FNDC1-202ENST00000329629 TMEM67Q5HYA8 995 aa16.14■□□□□ 0.17
FNDC1-202ENST00000329629 CCDC102BQ68D86 513 aa16.14■□□□□ 0.17
FNDC1-202ENST00000329629 EHBP1Q8NDI1 1231 aa16.14■□□□□ 0.17
FNDC1-202ENST00000329629 NCKAP5LQ9HCH0 1330 aa16.14■□□□□ 0.17
FNDC1-202ENST00000329629 IVLP07476 585 aa16.14■□□□□ 0.17
FNDC1-202ENST00000329629 SKILP12757 684 aa16.14■□□□□ 0.17
FNDC1-202ENST00000329629 TERF1P54274 439 aa16.14■□□□□ 0.17
FNDC1-202ENST00000329629 APBB1IPQ7Z5R6 666 aaPredicted RBP16.14■□□□□ 0.17
FNDC1-202ENST00000329629 SYCP3Q8IZU3 236 aa16.14■□□□□ 0.17
FNDC1-202ENST00000329629 UBE2Q2Q8WVN8 375 aa16.14■□□□□ 0.17
FNDC1-202ENST00000329629 SLC26A6Q9BXS9 759 aa16.14■□□□□ 0.17
FNDC1-202ENST00000329629 ARFGAP3Q9NP61 516 aa16.14■□□□□ 0.17
FNDC1-202ENST00000329629 CNPY2Q9Y2B0 182 aa16.14■□□□□ 0.17
FNDC1-202ENST00000329629 EVI5LQ96CN4 794 aa16.14■□□□□ 0.17
FNDC1-202ENST00000329629 NSRP1Q9H0G5 558 aaKnown RBP16.14■□□□□ 0.17
FNDC1-202ENST00000329629 TTC21AQ8NDW8 1320 aa16.14■□□□□ 0.17
FNDC1-202ENST00000329629 KIF4AO95239 1232 aa16.13■□□□□ 0.17
FNDC1-202ENST00000329629 HSPA2P54652 639 aa16.13■□□□□ 0.17
FNDC1-202ENST00000329629 ORC3Q9UBD5 711 aaPredicted RBP16.13■□□□□ 0.17
FNDC1-202ENST00000329629 C6orf229H3BNL8 230 aa16.13■□□□□ 0.17
FNDC1-202ENST00000329629 RRAGBQ5VZM2 374 aa16.13■□□□□ 0.17
FNDC1-202ENST00000329629 PAXIP1Q6ZW49 1069 aaPredicted RBP16.13■□□□□ 0.17
FNDC1-202ENST00000329629 MICU3Q86XE3 530 aa16.13■□□□□ 0.17
FNDC1-202ENST00000329629 RNF41Q9H4P4 317 aaPredicted RBP16.13■□□□□ 0.17
FNDC1-202ENST00000329629 GOLIM4O00461 696 aa16.13■□□□□ 0.17
FNDC1-202ENST00000329629 AFMP43652 599 aa16.13■□□□□ 0.17
FNDC1-202ENST00000329629 METAP2P50579 478 aaKnown RBP eCLIP16.13■□□□□ 0.17
FNDC1-202ENST00000329629 ZNF622Q969S3 477 aaKnown RBP eCLIP16.13■□□□□ 0.17
FNDC1-202ENST00000329629 AKR1B10O60218 316 aa16.13■□□□□ 0.17
FNDC1-202ENST00000329629 ST5P78524 1137 aa16.13■□□□□ 0.17
FNDC1-202ENST00000329629 GRIPAP1Q4V328 841 aa16.13■□□□□ 0.17
FNDC1-202ENST00000329629 PPP1R42Q7Z4L9 355 aa16.13■□□□□ 0.17
FNDC1-202ENST00000329629 CCDC186Q7Z3E2 898 aa16.12■□□□□ 0.17
FNDC1-202ENST00000329629 ZCRB1Q8TBF4 217 aaKnown RBP16.12■□□□□ 0.17
FNDC1-202ENST00000329629 EXOC1Q9NV70 894 aa16.12■□□□□ 0.17
FNDC1-202ENST00000329629 IFI16Q16666 785 aaKnown RBP16.12■□□□□ 0.17
FNDC1-202ENST00000329629 KANK3Q6NY19 840 aa16.12■□□□□ 0.17
FNDC1-202ENST00000329629 SLF2Q8IX21 1173 aa16.12■□□□□ 0.17
FNDC1-202ENST00000329629 DDX46Q7L014 1031 aaKnown RBP16.12■□□□□ 0.17
FNDC1-202ENST00000329629 NECAB1Q8N987 351 aa16.12■□□□□ 0.17
FNDC1-202ENST00000329629 ACSBG1Q96GR2 724 aa16.12■□□□□ 0.17
FNDC1-202ENST00000329629 RGS22Q8NE09 1264 aa16.12■□□□□ 0.17
FNDC1-202ENST00000329629 SELENOSQ9BQE4 189 aa16.12■□□□□ 0.17
FNDC1-202ENST00000329629 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.12■□□□□ 0.17
FNDC1-202ENST00000329629 NEK1Q96PY6 1258 aa16.11■□□□□ 0.17
FNDC1-202ENST00000329629 ZSCAN22P10073 491 aaPredicted RBP16.11■□□□□ 0.17
FNDC1-202ENST00000329629 PTGS1P23219 599 aa16.11■□□□□ 0.17
FNDC1-202ENST00000329629 SYKP43405 635 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms